RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
CDK4-212ENST00000552388 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
CDK4-212ENST00000552388 TTLL6Q8N841 843 aa16.59■□□□□ 0.25
CDK4-212ENST00000552388 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
CDK4-212ENST00000552388 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDK4-212ENST00000552388 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
CDK4-212ENST00000552388 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
CDK4-212ENST00000552388 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
CDK4-212ENST00000552388 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
CDK4-212ENST00000552388 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
CDK4-212ENST00000552388 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
CDK4-212ENST00000552388 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
CDK4-212ENST00000552388 UTYO14607 1347 aa16.58■□□□□ 0.24
CDK4-212ENST00000552388 SPEF2Q9C093 1822 aa16.57■□□□□ 0.24
CDK4-212ENST00000552388 CRAMP1Q96RY5 1269 aa16.57■□□□□ 0.24
CDK4-212ENST00000552388 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
CDK4-212ENST00000552388 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
CDK4-212ENST00000552388 RBM46Q8TBY0 533 aaKnown RBP16.56■□□□□ 0.24
CDK4-212ENST00000552388 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
CDK4-212ENST00000552388 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
CDK4-212ENST00000552388 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
CDK4-212ENST00000552388 NBPF7P0C2Y1 421 aaPredicted RBP16.55■□□□□ 0.24
CDK4-212ENST00000552388 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
CDK4-212ENST00000552388 CLUAP1Q96AJ1 413 aa16.55■□□□□ 0.24
CDK4-212ENST00000552388 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
CDK4-212ENST00000552388 COL4A1P02462 1669 aa16.55■□□□□ 0.24
CDK4-212ENST00000552388 RTL9Q8NET4 1388 aa16.54■□□□□ 0.24
CDK4-212ENST00000552388 CTSWP56202 376 aa16.54■□□□□ 0.24
CDK4-212ENST00000552388 CCDC152Q4G0S7 254 aa16.54■□□□□ 0.24
CDK4-212ENST00000552388 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
CDK4-212ENST00000552388 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
CDK4-212ENST00000552388 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
CDK4-212ENST00000552388 ZC3H4Q9UPT8 1303 aaKnown RBP16.53■□□□□ 0.24
CDK4-212ENST00000552388 CSF1RP07333 972 aa16.53■□□□□ 0.24
CDK4-212ENST00000552388 C9orf131Q5VYM1 1079 aa16.53■□□□□ 0.24
CDK4-212ENST00000552388 TMEM57Q8N5G2 664 aa16.53■□□□□ 0.24
CDK4-212ENST00000552388 MS4A1P11836 297 aa16.52■□□□□ 0.24
CDK4-212ENST00000552388 FOXO4P98177 505 aa16.52■□□□□ 0.24
CDK4-212ENST00000552388 GRAPQ13588 217 aa16.52■□□□□ 0.24
CDK4-212ENST00000552388 ARHGAP27Q6ZUM4 889 aa16.52■□□□□ 0.24
CDK4-212ENST00000552388 FTSJ3Q8IY81 847 aaKnown RBP16.52■□□□□ 0.24
CDK4-212ENST00000552388 JMYQ8N9B5 988 aa16.52■□□□□ 0.24
CDK4-212ENST00000552388 GRAPLQ8TC17 118 aaPredicted RBP16.52■□□□□ 0.24
CDK4-212ENST00000552388 C7orf43Q8WVR3 580 aa16.52■□□□□ 0.24
CDK4-212ENST00000552388 KAZALD1Q96I82 304 aa16.52■□□□□ 0.24
CDK4-212ENST00000552388 DICER1Q9UPY3 1922 aaKnown RBP16.52■□□□□ 0.23
CDK4-212ENST00000552388 BBOX1O75936 387 aa16.51■□□□□ 0.23
CDK4-212ENST00000552388 RLBP1P12271 317 aa16.51■□□□□ 0.23
CDK4-212ENST00000552388 FSTL1Q12841 308 aa16.51■□□□□ 0.23
CDK4-212ENST00000552388 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
CDK4-212ENST00000552388 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.51■□□□□ 0.23
CDK4-212ENST00000552388 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
CDK4-212ENST00000552388 A0A1B0GUL6 1792 aa16.51■□□□□ 0.23
CDK4-212ENST00000552388 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
CDK4-212ENST00000552388 C21orf2O43822 256 aa16.5■□□□□ 0.23
CDK4-212ENST00000552388 SOGA3Q5TF21 947 aa16.5■□□□□ 0.23
CDK4-212ENST00000552388 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
CDK4-212ENST00000552388 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
CDK4-212ENST00000552388 MEIS3Q99687 375 aa16.5■□□□□ 0.23
CDK4-212ENST00000552388 GREM2Q9H772 168 aa16.5■□□□□ 0.23
CDK4-212ENST00000552388 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
CDK4-212ENST00000552388 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
CDK4-212ENST00000552388 PCNTO95613 3336 aa16.49■□□□□ 0.23
CDK4-212ENST00000552388 PPEF1O14829 653 aaPredicted RBP16.49■□□□□ 0.23
CDK4-212ENST00000552388 PLIN1O60240 522 aa16.49■□□□□ 0.23
CDK4-212ENST00000552388 UBTFL1P0CB47 393 aaPredicted RBP16.49■□□□□ 0.23
CDK4-212ENST00000552388 LTBP1Q14766 1721 aa16.49■□□□□ 0.23
CDK4-212ENST00000552388 RABL6Q3YEC7 729 aaPredicted RBP16.49■□□□□ 0.23
CDK4-212ENST00000552388 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
CDK4-212ENST00000552388 TMC4Q7Z404 712 aa16.49■□□□□ 0.23
CDK4-212ENST00000552388 PANK1Q8TE04 598 aa16.49■□□□□ 0.23
CDK4-212ENST00000552388 GNAI3P08754 354 aa16.48■□□□□ 0.23
CDK4-212ENST00000552388 RPS8P62241 208 aaKnown RBP16.48■□□□□ 0.23
CDK4-212ENST00000552388 FAM161AQ3B820 660 aa16.48■□□□□ 0.23
CDK4-212ENST00000552388 LMBR1LQ6UX01 489 aa16.48■□□□□ 0.23
CDK4-212ENST00000552388 SP8Q8IXZ3 490 aa16.48■□□□□ 0.23
CDK4-212ENST00000552388 KLRG1Q96E93 195 aa16.48■□□□□ 0.23
CDK4-212ENST00000552388 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
CDK4-212ENST00000552388 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
CDK4-212ENST00000552388 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
CDK4-212ENST00000552388 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
CDK4-212ENST00000552388 ITGA6P23229 1130 aa16.47■□□□□ 0.23
CDK4-212ENST00000552388 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
CDK4-212ENST00000552388 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
CDK4-212ENST00000552388 ITPRIPQ8IWB1 547 aa16.47■□□□□ 0.23
CDK4-212ENST00000552388 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
CDK4-212ENST00000552388 CDC5LQ99459 802 aaKnown RBP16.47■□□□□ 0.23
CDK4-212ENST00000552388 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
CDK4-212ENST00000552388 PRELPP51888 382 aa16.46■□□□□ 0.23
CDK4-212ENST00000552388 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
CDK4-212ENST00000552388 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
CDK4-212ENST00000552388 LTBP3Q9NS15 1303 aa16.45■□□□□ 0.22
CDK4-212ENST00000552388 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
CDK4-212ENST00000552388 NFKBIEO00221 500 aa16.45■□□□□ 0.22
CDK4-212ENST00000552388 ZBTB7BO15156 539 aaPredicted RBP16.45■□□□□ 0.22
CDK4-212ENST00000552388 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
CDK4-212ENST00000552388 IFIT5Q13325 482 aaKnown RBP16.45■□□□□ 0.22
CDK4-212ENST00000552388 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
CDK4-212ENST00000552388 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
CDK4-212ENST00000552388 RTKN2Q8IZC4 609 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms