RNA–Protein interactions for RNA: ENST00000552261.1

CR383656.11-201, humanhuman

TSL 3 BASIC

Gene CR383656.11, Length 498 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.11-201ENST00000552261 USP17L12C9JPN9 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 USP17L11C9JVI0 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 USP17L21D6R901 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 USP17L18D6R9N7 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 USP17L22D6RA61 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 USP17L17D6RBQ6 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 USP17L19D6RCP7 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 USP17L20D6RJB6 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 RARAP10276 462 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 GRNP28799 593 aaKnown RBP8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 USP17L24Q0WX57 530 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 CRTC2Q53ET0 693 aaPredicted RBP8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 PERM1Q5SV97 790 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 ANKMY2Q8IV38 441 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 VTI1AQ96AJ9 217 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 KLK14Q9P0G3 267 aa8.07□□□□□ -1.12
CR383656.11-201ENST00000552261 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 HYAL3O43820 417 aaPredicted RBP8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 NRLP54845 237 aa8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 DGKZQ13574 1117 aa8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 KRT25Q7Z3Z0 450 aa8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 FNBP4Q8N3X1 1017 aaPredicted RBP8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 MYO19Q96H55 970 aa8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 PPP1R12CQ9BZL4 782 aa8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 ZFATQ9P243 1243 aa8.06□□□□□ -1.12
CR383656.11-201ENST00000552261 ZBTB42B2RXF5 422 aa8.05□□□□□ -1.12
CR383656.11-201ENST00000552261 IREB2P48200 963 aaKnown RBP8.05□□□□□ -1.12
CR383656.11-201ENST00000552261 KANK4Q5T7N3 995 aaPredicted RBP8.05□□□□□ -1.12
CR383656.11-201ENST00000552261 IFT43Q96FT9 208 aa8.05□□□□□ -1.12
CR383656.11-201ENST00000552261 MICAL2O94851 1124 aa8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 TARSP26639 723 aaKnown RBP8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 NOS3P29474 1203 aa8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 C11orf91Q3C1V1 193 aa8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 DCAF11Q8TEB1 546 aa8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 CALR3Q96L12 384 aaKnown RBP8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 QTRT2Q9H974 415 aaKnown RBP8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 RNF112Q9ULX5 631 aa8.04□□□□□ -1.12
CR383656.11-201ENST00000552261 SASH3O75995 380 aa8.03□□□□□ -1.12
CR383656.11-201ENST00000552261 EGFRP00533 1210 aa8.03□□□□□ -1.12
CR383656.11-201ENST00000552261 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
CR383656.11-201ENST00000552261 SMG9Q9H0W8 520 aaKnown RBP8.03□□□□□ -1.12
CR383656.11-201ENST00000552261 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
CR383656.11-201ENST00000552261 LGR5O75473 907 aa8.02□□□□□ -1.13
CR383656.11-201ENST00000552261 EIF2AK2P19525 551 aaKnown RBP8.02□□□□□ -1.13
CR383656.11-201ENST00000552261 WEE1P30291 646 aa8.02□□□□□ -1.13
CR383656.11-201ENST00000552261 MLLT1Q03111 559 aaPredicted RBP8.02□□□□□ -1.13
CR383656.11-201ENST00000552261 SLC51AQ86UW1 340 aa8.02□□□□□ -1.13
CR383656.11-201ENST00000552261 MEGF10Q96KG7 1140 aa8.02□□□□□ -1.13
CR383656.11-201ENST00000552261 TLR7Q9NYK1 1049 aaKnown RBP8.02□□□□□ -1.13
CR383656.11-201ENST00000552261 PRR23CQ6ZRP0 262 aa8.01□□□□□ -1.13
CR383656.11-201ENST00000552261 RTCBQ9Y3I0 505 aaKnown RBP8.01□□□□□ -1.13
CR383656.11-201ENST00000552261 DLL1O00548 723 aa8□□□□□ -1.13
CR383656.11-201ENST00000552261 DEAF1O75398 565 aaPredicted RBP8□□□□□ -1.13
CR383656.11-201ENST00000552261 LMOD1P29536 600 aaPredicted RBP8□□□□□ -1.13
CR383656.11-201ENST00000552261 PLAURQ03405 335 aa8□□□□□ -1.13
CR383656.11-201ENST00000552261 MAP4K3Q8IVH8 894 aa8□□□□□ -1.13
CR383656.11-201ENST00000552261 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
CR383656.11-201ENST00000552261 RBSNQ9H1K0 784 aa8□□□□□ -1.13
CR383656.11-201ENST00000552261 AKTIPQ9H8T0 292 aa8□□□□□ -1.13
CR383656.11-201ENST00000552261 XYLBO75191 536 aa7.99□□□□□ -1.13
CR383656.11-201ENST00000552261 GHRHP01286 108 aa7.99□□□□□ -1.13
CR383656.11-201ENST00000552261 PSAPP07602 524 aa7.99□□□□□ -1.13
CR383656.11-201ENST00000552261 SOX18P35713 384 aa7.99□□□□□ -1.13
CR383656.11-201ENST00000552261 PLD4Q96BZ4 506 aa7.99□□□□□ -1.13
CR383656.11-201ENST00000552261 ARXQ96QS3 562 aa7.99□□□□□ -1.13
CR383656.11-201ENST00000552261 HOXD8P13378 290 aaPredicted RBP7.98□□□□□ -1.13
CR383656.11-201ENST00000552261 HFE2Q6ZVN8 426 aa7.98□□□□□ -1.13
CR383656.11-201ENST00000552261 DZIP1LQ8IYY4 767 aaKnown RBP7.98□□□□□ -1.13
CR383656.11-201ENST00000552261 CACTIN-AS1Q8N1I8 211 aa7.98□□□□□ -1.13
CR383656.11-201ENST00000552261 TMEM130Q8N3G9 435 aa7.98□□□□□ -1.13
CR383656.11-201ENST00000552261 LOC102724428A0A0B4J2F2 783 aa7.97□□□□□ -1.13
CR383656.11-201ENST00000552261 OPLAHO14841 1288 aa7.97□□□□□ -1.13
CR383656.11-201ENST00000552261 PRKCSHP14314 528 aaPredicted RBP7.97□□□□□ -1.13
CR383656.11-201ENST00000552261 SIK1P57059 783 aa7.97□□□□□ -1.13
CR383656.11-201ENST00000552261 TREML1Q86YW5 311 aa7.97□□□□□ -1.13
CR383656.11-201ENST00000552261 CMTR1Q8N1G2 835 aaKnown RBP7.97□□□□□ -1.13
CR383656.11-201ENST00000552261 FAM200AQ8TCP9 573 aa7.97□□□□□ -1.13
CR383656.11-201ENST00000552261 A6NJR5 290 aa7.96□□□□□ -1.14
CR383656.11-201ENST00000552261 RGL4Q8IZJ4 473 aa7.96□□□□□ -1.14
CR383656.11-201ENST00000552261 MUC3BQ9H195 1237 aa7.96□□□□□ -1.14
CR383656.11-201ENST00000552261 F8W735 103 aaPredicted RBP7.95□□□□□ -1.14
CR383656.11-201ENST00000552261 FSTP19883 344 aa7.95□□□□□ -1.14
CR383656.11-201ENST00000552261 GDF6Q6KF10 455 aaPredicted RBP7.95□□□□□ -1.14
CR383656.11-201ENST00000552261 KRTAP1-3Q8IUG1 177 aa7.95□□□□□ -1.14
CR383656.11-201ENST00000552261 IL22RA1Q8N6P7 574 aa7.95□□□□□ -1.14
CR383656.11-201ENST00000552261 KRTAP4-12Q9BQ66 201 aa7.95□□□□□ -1.14
CR383656.11-201ENST00000552261 LRFN2Q9ULH4 789 aa7.95□□□□□ -1.14
CR383656.11-201ENST00000552261 GSC2O15499 205 aa7.94□□□□□ -1.14
CR383656.11-201ENST00000552261 MMP20O60882 483 aa7.94□□□□□ -1.14
CR383656.11-201ENST00000552261 Q6ZS46 218 aa7.94□□□□□ -1.14
CR383656.11-201ENST00000552261 PCMTD2Q9NV79 361 aa7.94□□□□□ -1.14
CR383656.11-201ENST00000552261 USP20Q9Y2K6 914 aa7.94□□□□□ -1.14
CR383656.11-201ENST00000552261 KCNMB2Q9Y691 235 aa7.94□□□□□ -1.14
CR383656.11-201ENST00000552261 J3QW42 95 aa7.93□□□□□ -1.14
CR383656.11-201ENST00000552261 NSUN5Q96P11 429 aaKnown RBP7.93□□□□□ -1.14
CR383656.11-201ENST00000552261 PTCD1O75127 700 aaKnown RBP7.92□□□□□ -1.14
CR383656.11-201ENST00000552261 SETDB1Q15047 1291 aa7.92□□□□□ -1.14
CR383656.11-201ENST00000552261 SWI5Q1ZZU3 235 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms