RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 ARHGAP45Q92619 1136 aa20.73■□□□□ 0.91
GCN1-209ENST00000551920 CCDC85AQ96PX6 553 aaPredicted RBP20.73■□□□□ 0.91
GCN1-209ENST00000551920 PLA2G12BQ9BX93 195 aa20.73■□□□□ 0.91
GCN1-209ENST00000551920 API5Q9BZZ5 524 aaKnown RBP20.73■□□□□ 0.91
GCN1-209ENST00000551920 FER1L6Q2WGJ9 1857 aa20.73■□□□□ 0.91
GCN1-209ENST00000551920 GRAPQ13588 217 aa20.72■□□□□ 0.91
GCN1-209ENST00000551920 DDX46Q7L014 1031 aaKnown RBP20.72■□□□□ 0.91
GCN1-209ENST00000551920 GRAPLQ8TC17 118 aaPredicted RBP20.72■□□□□ 0.91
GCN1-209ENST00000551920 FRAT1Q92837 279 aaPredicted RBP20.72■□□□□ 0.91
GCN1-209ENST00000551920 CELF1Q92879 486 aaKnown RBP20.72■□□□□ 0.91
GCN1-209ENST00000551920 SEC31BQ9NQW1 1179 aa20.72■□□□□ 0.91
GCN1-209ENST00000551920 UTYO14607 1347 aa20.72■□□□□ 0.91
GCN1-209ENST00000551920 LRRC37AA6NMS7 1700 aa20.71■□□□□ 0.91
GCN1-209ENST00000551920 NBPF7P0C2Y1 421 aaPredicted RBP20.71■□□□□ 0.91
GCN1-209ENST00000551920 HSP90B1P14625 803 aaKnown RBP20.71■□□□□ 0.91
GCN1-209ENST00000551920 EPHA10Q5JZY3 1008 aa20.71■□□□□ 0.91
GCN1-209ENST00000551920 TTLL11Q8NHH1 800 aa20.71■□□□□ 0.91
GCN1-209ENST00000551920 CHD4Q14839 1912 aa20.7■□□□□ 0.91
GCN1-209ENST00000551920 FOXO4P98177 505 aa20.7■□□□□ 0.9
GCN1-209ENST00000551920 CCDC152Q4G0S7 254 aa20.7■□□□□ 0.9
GCN1-209ENST00000551920 CCDC93Q567U6 631 aa20.7■□□□□ 0.9
GCN1-209ENST00000551920 ATF7IPQ6VMQ6 1270 aa20.7■□□□□ 0.9
GCN1-209ENST00000551920 KAZALD1Q96I82 304 aa20.7■□□□□ 0.9
GCN1-209ENST00000551920 GREM2Q9H772 168 aa20.7■□□□□ 0.9
GCN1-209ENST00000551920 MYH3P11055 1940 aa20.7■□□□□ 0.9
GCN1-209ENST00000551920 RTL9Q8NET4 1388 aa20.7■□□□□ 0.9
GCN1-209ENST00000551920 SUCLG2Q96I99 432 aa20.69■□□□□ 0.9
GCN1-209ENST00000551920 USP44Q9H0E7 712 aa20.69■□□□□ 0.9
GCN1-209ENST00000551920 C9orf78Q9NZ63 289 aaPredicted RBP20.69■□□□□ 0.9
GCN1-209ENST00000551920 ATP6V0A2Q9Y487 856 aa20.69■□□□□ 0.9
GCN1-209ENST00000551920 CCT4P50991 539 aaKnown RBP20.68■□□□□ 0.9
GCN1-209ENST00000551920 FAM161AQ3B820 660 aa20.68■□□□□ 0.9
GCN1-209ENST00000551920 SOGA3Q5TF21 947 aa20.68■□□□□ 0.9
GCN1-209ENST00000551920 LTBP3Q9NS15 1303 aa20.68■□□□□ 0.9
GCN1-209ENST00000551920 DUOX1Q9NRD9 1551 aa20.68■□□□□ 0.9
GCN1-209ENST00000551920 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
GCN1-209ENST00000551920 BBOX1O75936 387 aa20.67■□□□□ 0.9
GCN1-209ENST00000551920 CSF1RP07333 972 aa20.67■□□□□ 0.9
GCN1-209ENST00000551920 YY1P25490 414 aa20.67■□□□□ 0.9
GCN1-209ENST00000551920 CLUAP1Q96AJ1 413 aa20.67■□□□□ 0.9
GCN1-209ENST00000551920 TAOK3Q9H2K8 898 aa20.67■□□□□ 0.9
GCN1-209ENST00000551920 C9orf131Q5VYM1 1079 aa20.66■□□□□ 0.9
GCN1-209ENST00000551920 ZKSCAN2Q63HK3 967 aa20.66■□□□□ 0.9
GCN1-209ENST00000551920 INTS3Q68E01 1043 aaKnown RBP20.66■□□□□ 0.9
GCN1-209ENST00000551920 RCAN3Q9UKA8 241 aa20.66■□□□□ 0.9
GCN1-209ENST00000551920 LTBP1Q14766 1721 aa20.66■□□□□ 0.9
GCN1-209ENST00000551920 SBF1O95248 1867 aa20.65■□□□□ 0.9
GCN1-209ENST00000551920 RLBP1P12271 317 aa20.65■□□□□ 0.9
GCN1-209ENST00000551920 COL4A5P29400 1685 aa20.64■□□□□ 0.9
GCN1-209ENST00000551920 LMNB1P20700 586 aa20.64■□□□□ 0.89
GCN1-209ENST00000551920 RPS8P62241 208 aaKnown RBP20.64■□□□□ 0.89
GCN1-209ENST00000551920 FKBP4Q02790 459 aaKnown RBP eCLIP20.64■□□□□ 0.89
GCN1-209ENST00000551920 CC2D2BQ6DHV5 1058 aa20.64■□□□□ 0.89
GCN1-209ENST00000551920 SP8Q8IXZ3 490 aa20.64■□□□□ 0.89
GCN1-209ENST00000551920 RTKN2Q8IZC4 609 aa20.64■□□□□ 0.89
GCN1-209ENST00000551920 ANKRD44Q8N8A2 993 aa20.64■□□□□ 0.89
GCN1-209ENST00000551920 RNF181Q9P0P0 153 aa20.64■□□□□ 0.89
GCN1-209ENST00000551920 TIAM2Q8IVF5 1701 aa20.64■□□□□ 0.89
GCN1-209ENST00000551920 ITGA6P23229 1130 aa20.63■□□□□ 0.89
GCN1-209ENST00000551920 LMBR1LQ6UX01 489 aa20.63■□□□□ 0.89
GCN1-209ENST00000551920 TMEM57Q8N5G2 664 aa20.63■□□□□ 0.89
GCN1-209ENST00000551920 MEIS3Q99687 375 aa20.63■□□□□ 0.89
GCN1-209ENST00000551920 BICC1Q9H694 974 aaKnown RBP20.63■□□□□ 0.89
GCN1-209ENST00000551920 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
GCN1-209ENST00000551920 SPEF2Q9C093 1822 aa20.62■□□□□ 0.89
GCN1-209ENST00000551920 TMC4Q7Z404 712 aa20.62■□□□□ 0.89
GCN1-209ENST00000551920 PSMD1Q99460 953 aa20.62■□□□□ 0.89
GCN1-209ENST00000551920 RABL6Q3YEC7 729 aaPredicted RBP20.61■□□□□ 0.89
GCN1-209ENST00000551920 ANKRD18AQ8IVF6 992 aa20.61■□□□□ 0.89
GCN1-209ENST00000551920 CDC5LQ99459 802 aaKnown RBP20.61■□□□□ 0.89
GCN1-209ENST00000551920 PLIN1O60240 522 aa20.59■□□□□ 0.89
GCN1-209ENST00000551920 UBTFL1P0CB47 393 aaPredicted RBP20.59■□□□□ 0.89
GCN1-209ENST00000551920 GPSM2P81274 684 aa20.59■□□□□ 0.89
GCN1-209ENST00000551920 DZIP1LQ8IYY4 767 aaKnown RBP20.59■□□□□ 0.89
GCN1-209ENST00000551920 RTFDC1Q9BY42 306 aaPredicted RBP20.59■□□□□ 0.89
GCN1-209ENST00000551920 CHMP3Q9Y3E7 222 aa20.59■□□□□ 0.89
GCN1-209ENST00000551920 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.89
GCN1-209ENST00000551920 DPP8Q6V1X1 898 aaPredicted RBP20.58■□□□□ 0.89
GCN1-209ENST00000551920 FTSJ3Q8IY81 847 aaKnown RBP20.58■□□□□ 0.89
GCN1-209ENST00000551920 MPNDQ8N594 471 aa20.58■□□□□ 0.89
GCN1-209ENST00000551920 PANK1Q8TE04 598 aa20.58■□□□□ 0.89
GCN1-209ENST00000551920 BSDC1Q9NW68 430 aaPredicted RBP20.58■□□□□ 0.89
GCN1-209ENST00000551920 ANKRD18BA2A2Z9 1011 aa20.57■□□□□ 0.88
GCN1-209ENST00000551920 IARSP41252 1262 aaKnown RBP20.57■□□□□ 0.88
GCN1-209ENST00000551920 IFIT5Q13325 482 aaKnown RBP20.57■□□□□ 0.88
GCN1-209ENST00000551920 CCDC88AQ3V6T2 1871 aa20.57■□□□□ 0.88
GCN1-209ENST00000551920 ZNF594Q96JF6 807 aaPredicted RBP20.57■□□□□ 0.88
GCN1-209ENST00000551920 LRRFIP2Q9Y608 721 aaKnown RBP20.57■□□□□ 0.88
GCN1-209ENST00000551920 ZNF784Q8NCA9 323 aaPredicted RBP20.56■□□□□ 0.88
GCN1-209ENST00000551920 TMX4Q9H1E5 349 aaPredicted RBP20.56■□□□□ 0.88
GCN1-209ENST00000551920 POLLQ9UGP5 575 aa20.56■□□□□ 0.88
GCN1-209ENST00000551920 NSFL1CQ9UNZ2 370 aaKnown RBP20.56■□□□□ 0.88
GCN1-209ENST00000551920 DICER1Q9UPY3 1922 aaKnown RBP20.56■□□□□ 0.88
GCN1-209ENST00000551920 WTIPA6NIX2 430 aaPredicted RBP20.55■□□□□ 0.88
GCN1-209ENST00000551920 IGHMBP2P38935 993 aaKnown RBP20.55■□□□□ 0.88
GCN1-209ENST00000551920 GPR101Q96P66 508 aaPredicted RBP20.55■□□□□ 0.88
GCN1-209ENST00000551920 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
GCN1-209ENST00000551920 MINPP1Q9UNW1 487 aa20.55■□□□□ 0.88
GCN1-209ENST00000551920 ZC3H4Q9UPT8 1303 aaKnown RBP20.54■□□□□ 0.88
GCN1-209ENST00000551920 AOC3Q16853 763 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms