RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 UTYO14607 1347 aa23.54■■□□□ 1.36
DDX54-209ENST00000551912 USP44Q9H0E7 712 aa23.53■■□□□ 1.36
DDX54-209ENST00000551912 ARFGEF1Q9Y6D6 1849 aa23.53■■□□□ 1.36
DDX54-209ENST00000551912 NBPF7P0C2Y1 421 aaPredicted RBP23.52■■□□□ 1.36
DDX54-209ENST00000551912 DZIP1LQ8IYY4 767 aaKnown RBP23.52■■□□□ 1.36
DDX54-209ENST00000551912 SLX4Q8IY92 1834 aa23.52■■□□□ 1.36
DDX54-209ENST00000551912 CACNA1SQ13698 1873 aa23.51■■□□□ 1.35
DDX54-209ENST00000551912 TTLL11Q8NHH1 800 aa23.51■■□□□ 1.35
DDX54-209ENST00000551912 ZNF219Q9P2Y4 722 aaPredicted RBP23.51■■□□□ 1.35
DDX54-209ENST00000551912 MYH3P11055 1940 aa23.51■■□□□ 1.35
DDX54-209ENST00000551912 C21orf2O43822 256 aa23.5■■□□□ 1.35
DDX54-209ENST00000551912 MS4A1P11836 297 aa23.5■■□□□ 1.35
DDX54-209ENST00000551912 GRAPQ13588 217 aa23.5■■□□□ 1.35
DDX54-209ENST00000551912 TMEM57Q8N5G2 664 aa23.5■■□□□ 1.35
DDX54-209ENST00000551912 GRAPLQ8TC17 118 aaPredicted RBP23.5■■□□□ 1.35
DDX54-209ENST00000551912 CCDC85AQ96PX6 553 aaPredicted RBP23.5■■□□□ 1.35
DDX54-209ENST00000551912 PPEF1O14829 653 aaPredicted RBP23.49■■□□□ 1.35
DDX54-209ENST00000551912 BBOX1O75936 387 aa23.49■■□□□ 1.35
DDX54-209ENST00000551912 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.49■■□□□ 1.35
DDX54-209ENST00000551912 SUCLG2Q96I99 432 aa23.49■■□□□ 1.35
DDX54-209ENST00000551912 CSF1RP07333 972 aa23.48■■□□□ 1.35
DDX54-209ENST00000551912 FOXO4P98177 505 aa23.48■■□□□ 1.35
DDX54-209ENST00000551912 SOGA3Q5TF21 947 aa23.48■■□□□ 1.35
DDX54-209ENST00000551912 ARHGAP27Q6ZUM4 889 aa23.48■■□□□ 1.35
DDX54-209ENST00000551912 C7orf43Q8WVR3 580 aa23.48■■□□□ 1.35
DDX54-209ENST00000551912 GREM2Q9H772 168 aa23.48■■□□□ 1.35
DDX54-209ENST00000551912 PLIN1O60240 522 aa23.47■■□□□ 1.35
DDX54-209ENST00000551912 UBTFL1P0CB47 393 aaPredicted RBP23.47■■□□□ 1.35
DDX54-209ENST00000551912 RLBP1P12271 317 aa23.47■■□□□ 1.35
DDX54-209ENST00000551912 SEC31BQ9NQW1 1179 aa23.47■■□□□ 1.35
DDX54-209ENST00000551912 RTL9Q8NET4 1388 aa23.47■■□□□ 1.35
DDX54-209ENST00000551912 EPHA10Q5JZY3 1008 aa23.46■■□□□ 1.35
DDX54-209ENST00000551912 CELF1Q92879 486 aaKnown RBP23.46■■□□□ 1.35
DDX54-209ENST00000551912 KAZALD1Q96I82 304 aa23.46■■□□□ 1.35
DDX54-209ENST00000551912 RPS8P62241 208 aaKnown RBP23.45■■□□□ 1.34
DDX54-209ENST00000551912 FAM161AQ3B820 660 aa23.45■■□□□ 1.34
DDX54-209ENST00000551912 CCDC93Q567U6 631 aa23.45■■□□□ 1.34
DDX54-209ENST00000551912 CC2D2BQ6DHV5 1058 aa23.45■■□□□ 1.34
DDX54-209ENST00000551912 LMBR1LQ6UX01 489 aa23.45■■□□□ 1.34
DDX54-209ENST00000551912 TMC4Q7Z404 712 aa23.45■■□□□ 1.34
DDX54-209ENST00000551912 CDC5LQ99459 802 aaKnown RBP23.45■■□□□ 1.34
DDX54-209ENST00000551912 MEIS3Q99687 375 aa23.45■■□□□ 1.34
DDX54-209ENST00000551912 TMX4Q9H1E5 349 aaPredicted RBP23.45■■□□□ 1.34
DDX54-209ENST00000551912 HDAC5Q9UQL6 1122 aa23.45■■□□□ 1.34
DDX54-209ENST00000551912 TAF1P21675 1872 aa23.45■■□□□ 1.34
DDX54-209ENST00000551912 GNAI3P08754 354 aa23.44■■□□□ 1.34
DDX54-209ENST00000551912 ITPRIPQ8IWB1 547 aa23.44■■□□□ 1.34
DDX54-209ENST00000551912 PANK1Q8TE04 598 aa23.44■■□□□ 1.34
DDX54-209ENST00000551912 BICC1Q9H694 974 aaKnown RBP23.44■■□□□ 1.34
DDX54-209ENST00000551912 CHMP3Q9Y3E7 222 aa23.44■■□□□ 1.34
DDX54-209ENST00000551912 ATP6V0A2Q9Y487 856 aa23.44■■□□□ 1.34
DDX54-209ENST00000551912 ITGA6P23229 1130 aa23.43■■□□□ 1.34
DDX54-209ENST00000551912 OLFM4Q6UX06 510 aa23.43■■□□□ 1.34
DDX54-209ENST00000551912 ANKRD18AQ8IVF6 992 aa23.43■■□□□ 1.34
DDX54-209ENST00000551912 IFIT5Q13325 482 aaKnown RBP23.42■■□□□ 1.34
DDX54-209ENST00000551912 RABL6Q3YEC7 729 aaPredicted RBP23.42■■□□□ 1.34
DDX54-209ENST00000551912 SP8Q8IXZ3 490 aa23.42■■□□□ 1.34
DDX54-209ENST00000551912 RTKN2Q8IZC4 609 aa23.42■■□□□ 1.34
DDX54-209ENST00000551912 ANKRD18BA2A2Z9 1011 aa23.41■■□□□ 1.34
DDX54-209ENST00000551912 GRIPAP1Q4V328 841 aa23.41■■□□□ 1.34
DDX54-209ENST00000551912 COL4A1P02462 1669 aa23.41■■□□□ 1.34
DDX54-209ENST00000551912 NFKBIEO00221 500 aa23.4■■□□□ 1.34
DDX54-209ENST00000551912 PDE3AQ14432 1141 aa23.4■■□□□ 1.34
DDX54-209ENST00000551912 CCDC57Q2TAC2 916 aa23.4■■□□□ 1.34
DDX54-209ENST00000551912 ANKRD44Q8N8A2 993 aa23.4■■□□□ 1.34
DDX54-209ENST00000551912 LRRFIP2Q9Y608 721 aaKnown RBP23.4■■□□□ 1.34
DDX54-209ENST00000551912 IGHMBP2P38935 993 aaKnown RBP23.39■■□□□ 1.33
DDX54-209ENST00000551912 RASSF7Q02833 373 aa23.39■■□□□ 1.33
DDX54-209ENST00000551912 SLC51AQ86UW1 340 aa23.39■■□□□ 1.33
DDX54-209ENST00000551912 TAOK3Q9H2K8 898 aa23.39■■□□□ 1.33
DDX54-209ENST00000551912 FER1L6Q2WGJ9 1857 aa23.39■■□□□ 1.33
DDX54-209ENST00000551912 RRP1P56182 461 aaKnown RBP23.38■■□□□ 1.33
DDX54-209ENST00000551912 LTBP3Q9NS15 1303 aa23.37■■□□□ 1.33
DDX54-209ENST00000551912 SNED1Q8TER0 1413 aa23.37■■□□□ 1.33
DDX54-209ENST00000551912 ZBTB7BO15156 539 aaPredicted RBP23.37■■□□□ 1.33
DDX54-209ENST00000551912 GNAI2P04899 355 aa23.37■■□□□ 1.33
DDX54-209ENST00000551912 FKBP4Q02790 459 aaKnown RBP eCLIP23.37■■□□□ 1.33
DDX54-209ENST00000551912 MVPQ14764 893 aaKnown RBP23.37■■□□□ 1.33
DDX54-209ENST00000551912 TAF7LQ5H9L4 462 aa23.37■■□□□ 1.33
DDX54-209ENST00000551912 MPHOSPH8Q99549 860 aa23.37■■□□□ 1.33
DDX54-209ENST00000551912 BSDC1Q9NW68 430 aaPredicted RBP23.37■■□□□ 1.33
DDX54-209ENST00000551912 COG6Q9Y2V7 657 aa23.37■■□□□ 1.33
DDX54-209ENST00000551912 CHD4Q14839 1912 aa23.36■■□□□ 1.33
DDX54-209ENST00000551912 C20orf194Q5TEA3 1177 aa23.36■■□□□ 1.33
DDX54-209ENST00000551912 PSMD1Q99460 953 aa23.36■■□□□ 1.33
DDX54-209ENST00000551912 LRRC37AA6NMS7 1700 aa23.36■■□□□ 1.33
DDX54-209ENST00000551912 DPP8Q6V1X1 898 aaPredicted RBP23.35■■□□□ 1.33
DDX54-209ENST00000551912 MPNDQ8N594 471 aa23.35■■□□□ 1.33
DDX54-209ENST00000551912 DDX19BQ9UMR2 479 aa23.35■■□□□ 1.33
DDX54-209ENST00000551912 LMNB1P20700 586 aa23.34■■□□□ 1.33
DDX54-209ENST00000551912 NSFL1CQ9UNZ2 370 aaKnown RBP23.34■■□□□ 1.33
DDX54-209ENST00000551912 ZNF594Q96JF6 807 aaPredicted RBP23.33■■□□□ 1.33
DDX54-209ENST00000551912 SPEF2Q9C093 1822 aa23.33■■□□□ 1.32
DDX54-209ENST00000551912 GPSM2P81274 684 aa23.32■■□□□ 1.32
DDX54-209ENST00000551912 C9orf131Q5VYM1 1079 aa23.32■■□□□ 1.32
DDX54-209ENST00000551912 SUPT20HQ8NEM7 779 aa23.32■■□□□ 1.32
DDX54-209ENST00000551912 CHMP4BQ9H444 224 aaKnown RBP23.32■■□□□ 1.32
DDX54-209ENST00000551912 ANKIB1Q9P2G1 1089 aa23.32■■□□□ 1.32
DDX54-209ENST00000551912 MINPP1Q9UNW1 487 aa23.32■■□□□ 1.32
DDX54-209ENST00000551912 SBF1O95248 1867 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms