RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 PDE8AO60658 829 aa24.26■■□□□ 1.47
DDX54-208ENST00000551344 DNAAF4Q8WXU2 420 aa24.26■■□□□ 1.47
DDX54-208ENST00000551344 JDP2Q8WYK2 163 aa24.26■■□□□ 1.47
DDX54-208ENST00000551344 NEURL1BA8MQ27 555 aa24.25■■□□□ 1.47
DDX54-208ENST00000551344 RBM46Q8TBY0 533 aaKnown RBP24.25■■□□□ 1.47
DDX54-208ENST00000551344 CDHR2Q9BYE9 1310 aa24.25■■□□□ 1.47
DDX54-208ENST00000551344 LAMB2P55268 1798 aa24.24■■□□□ 1.47
DDX54-208ENST00000551344 FZD9O00144 591 aa24.24■■□□□ 1.47
DDX54-208ENST00000551344 SLFN5Q08AF3 891 aa24.24■■□□□ 1.47
DDX54-208ENST00000551344 CWF19L2Q2TBE0 894 aaKnown RBP24.24■■□□□ 1.47
DDX54-208ENST00000551344 MPNDQ8N594 471 aa24.24■■□□□ 1.47
DDX54-208ENST00000551344 SUPT20HQ8NEM7 779 aa24.24■■□□□ 1.47
DDX54-208ENST00000551344 RTFDC1Q9BY42 306 aaPredicted RBP24.24■■□□□ 1.47
DDX54-208ENST00000551344 TIAM2Q8IVF5 1701 aa24.24■■□□□ 1.47
DDX54-208ENST00000551344 DDX60Q8IY21 1712 aaKnown RBP24.24■■□□□ 1.47
DDX54-208ENST00000551344 DDNO94850 711 aaPredicted RBP24.23■■□□□ 1.47
DDX54-208ENST00000551344 RPS8P62241 208 aaKnown RBP24.23■■□□□ 1.47
DDX54-208ENST00000551344 CCDC152Q4G0S7 254 aa24.23■■□□□ 1.47
DDX54-208ENST00000551344 JARID2Q92833 1246 aaPredicted RBP24.23■■□□□ 1.47
DDX54-208ENST00000551344 CELF1Q92879 486 aaKnown RBP24.23■■□□□ 1.47
DDX54-208ENST00000551344 POTECB2RU33 542 aa24.22■■□□□ 1.47
DDX54-208ENST00000551344 DPP8Q6V1X1 898 aaPredicted RBP24.22■■□□□ 1.47
DDX54-208ENST00000551344 SLC51AQ86UW1 340 aa24.22■■□□□ 1.47
DDX54-208ENST00000551344 LARGE2Q8N3Y3 721 aa24.22■■□□□ 1.47
DDX54-208ENST00000551344 LINS1Q8NG48 757 aa24.22■■□□□ 1.47
DDX54-208ENST00000551344 H7C1W4 665 aa24.21■■□□□ 1.47
DDX54-208ENST00000551344 GCKRQ14397 625 aa24.21■■□□□ 1.47
DDX54-208ENST00000551344 FSTL1Q12841 308 aa24.2■■□□□ 1.46
DDX54-208ENST00000551344 HSPA6P17066 643 aa24.19■■□□□ 1.46
DDX54-208ENST00000551344 MIER1Q8N108 512 aa24.19■■□□□ 1.46
DDX54-208ENST00000551344 L3MBTL3Q96JM7 780 aaPredicted RBP24.19■■□□□ 1.46
DDX54-208ENST00000551344 WDR90Q96KV7 1748 aa24.18■■□□□ 1.46
DDX54-208ENST00000551344 PPIP5K2O43314 1243 aa24.18■■□□□ 1.46
DDX54-208ENST00000551344 EIF6P56537 245 aaKnown RBP24.18■■□□□ 1.46
DDX54-208ENST00000551344 TRMT2AQ8IZ69 625 aaKnown RBP24.18■■□□□ 1.46
DDX54-208ENST00000551344 CDCA7LQ96GN5 454 aa24.18■■□□□ 1.46
DDX54-208ENST00000551344 SEC31BQ9NQW1 1179 aa24.18■■□□□ 1.46
DDX54-208ENST00000551344 ZNF541Q9H0D2 1346 aa24.17■■□□□ 1.46
DDX54-208ENST00000551344 IQCA1LA6NCM1 817 aa24.17■■□□□ 1.46
DDX54-208ENST00000551344 F6X3S4 739 aa24.17■■□□□ 1.46
DDX54-208ENST00000551344 CTSWP56202 376 aa24.17■■□□□ 1.46
DDX54-208ENST00000551344 UBE3BQ7Z3V4 1068 aa24.17■■□□□ 1.46
DDX54-208ENST00000551344 NIM1KQ8IY84 436 aa24.17■■□□□ 1.46
DDX54-208ENST00000551344 AOC3Q16853 763 aa24.16■■□□□ 1.46
DDX54-208ENST00000551344 BEND3Q5T5X7 828 aa24.16■■□□□ 1.46
DDX54-208ENST00000551344 GPC2Q8N158 579 aa24.16■■□□□ 1.46
DDX54-208ENST00000551344 SMC1BQ8NDV3 1235 aa24.16■■□□□ 1.46
DDX54-208ENST00000551344 TTLL11Q8NHH1 800 aa24.16■■□□□ 1.46
DDX54-208ENST00000551344 PLA2G12BQ9BX93 195 aa24.16■■□□□ 1.46
DDX54-208ENST00000551344 NSFL1CQ9UNZ2 370 aaKnown RBP24.16■■□□□ 1.46
DDX54-208ENST00000551344 TAF1P21675 1872 aa24.15■■□□□ 1.46
DDX54-208ENST00000551344 KIAA2012Q0VF49 1180 aa24.15■■□□□ 1.46
DDX54-208ENST00000551344 CASP7P55210 303 aa24.14■■□□□ 1.45
DDX54-208ENST00000551344 MRPL50Q8N5N7 158 aaKnown RBP24.14■■□□□ 1.45
DDX54-208ENST00000551344 CCDC85AQ96PX6 553 aaPredicted RBP24.14■■□□□ 1.45
DDX54-208ENST00000551344 CDC5LQ99459 802 aaKnown RBP24.14■■□□□ 1.45
DDX54-208ENST00000551344 ANKRD18AQ8IVF6 992 aa24.13■■□□□ 1.45
DDX54-208ENST00000551344 ZNRF3Q9ULT6 936 aa24.13■■□□□ 1.45
DDX54-208ENST00000551344 CT47B1P0C2W7 299 aaPredicted RBP24.12■■□□□ 1.45
DDX54-208ENST00000551344 GPSM2P81274 684 aa24.12■■□□□ 1.45
DDX54-208ENST00000551344 PODXL2Q9NZ53 605 aa24.12■■□□□ 1.45
DDX54-208ENST00000551344 WASHC4Q2M389 1173 aa24.11■■□□□ 1.45
DDX54-208ENST00000551344 ALDH1L2Q3SY69 923 aa24.11■■□□□ 1.45
DDX54-208ENST00000551344 SSH1Q8WYL5 1049 aa24.11■■□□□ 1.45
DDX54-208ENST00000551344 GREM2Q9H772 168 aa24.11■■□□□ 1.45
DDX54-208ENST00000551344 HACL1Q9UJ83 578 aa24.11■■□□□ 1.45
DDX54-208ENST00000551344 RTL9Q8NET4 1388 aa24.11■■□□□ 1.45
DDX54-208ENST00000551344 COL4A5P29400 1685 aa24.11■■□□□ 1.45
DDX54-208ENST00000551344 C6orf229H3BNL8 230 aa24.1■■□□□ 1.45
DDX54-208ENST00000551344 ALDH1L1O75891 902 aa24.1■■□□□ 1.45
DDX54-208ENST00000551344 CSF1RP07333 972 aa24.1■■□□□ 1.45
DDX54-208ENST00000551344 APLP1P51693 650 aa24.1■■□□□ 1.45
DDX54-208ENST00000551344 EYA3Q99504 573 aa24.1■■□□□ 1.45
DDX54-208ENST00000551344 TAF1DQ9H5J8 278 aaPredicted RBP24.1■■□□□ 1.45
DDX54-208ENST00000551344 POLLQ9UGP5 575 aa24.1■■□□□ 1.45
DDX54-208ENST00000551344 GJA3Q9Y6H8 435 aa24.1■■□□□ 1.45
DDX54-208ENST00000551344 PTPRCP08575 1304 aa24.1■■□□□ 1.45
DDX54-208ENST00000551344 SLC4A10Q6U841 1118 aa24.09■■□□□ 1.45
DDX54-208ENST00000551344 BSDC1Q9NW68 430 aaPredicted RBP24.09■■□□□ 1.45
DDX54-208ENST00000551344 ANKIB1Q9P2G1 1089 aa24.09■■□□□ 1.45
DDX54-208ENST00000551344 LRRC37AA6NMS7 1700 aa24.09■■□□□ 1.45
DDX54-208ENST00000551344 CXCL9Q07325 125 aa24.08■■□□□ 1.45
DDX54-208ENST00000551344 TBC1D16Q8TBP0 767 aa24.08■■□□□ 1.45
DDX54-208ENST00000551344 SRCIN1Q9C0H9 1055 aa24.08■■□□□ 1.45
DDX54-208ENST00000551344 SCN4AP35499 1836 aa24.07■■□□□ 1.44
DDX54-208ENST00000551344 GRM8O00222 908 aa24.07■■□□□ 1.44
DDX54-208ENST00000551344 EPHX2P34913 555 aa24.07■■□□□ 1.44
DDX54-208ENST00000551344 PNMA8AQ86V59 439 aaPredicted RBP24.07■■□□□ 1.44
DDX54-208ENST00000551344 C9orf78Q9NZ63 289 aaPredicted RBP24.07■■□□□ 1.44
DDX54-208ENST00000551344 COL4A1P02462 1669 aa24.07■■□□□ 1.44
DDX54-208ENST00000551344 CHADLQ6NUI6 762 aa24.06■■□□□ 1.44
DDX54-208ENST00000551344 ZC3H12CQ9C0D7 883 aaKnown RBP24.06■■□□□ 1.44
DDX54-208ENST00000551344 GGA1Q9UJY5 639 aa24.06■■□□□ 1.44
DDX54-208ENST00000551344 DUOX1Q9NRD9 1551 aa24.05■■□□□ 1.44
DDX54-208ENST00000551344 ITGA6P23229 1130 aa24.05■■□□□ 1.44
DDX54-208ENST00000551344 LMOD1P29536 600 aaPredicted RBP24.05■■□□□ 1.44
DDX54-208ENST00000551344 IGHMBP2P38935 993 aaKnown RBP24.05■■□□□ 1.44
DDX54-208ENST00000551344 TNIP1Q15025 636 aa24.05■■□□□ 1.44
DDX54-208ENST00000551344 CIAPIN1Q6FI81 312 aa24.05■■□□□ 1.44
DDX54-208ENST00000551344 LDHDQ86WU2 507 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms