RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	COL4A5	P29400	1685 aa		12.42	□□□□□ -0.42
PFKM-222	ENST00000551339	DDX58	O95786	925 aa	Known RBP	12.41	□□□□□ -0.42
PFKM-222	ENST00000551339	EIF6	P56537	245 aa	Known RBP	12.41	□□□□□ -0.42
PFKM-222	ENST00000551339	CHADL	Q6NUI6	762 aa		12.41	□□□□□ -0.42
PFKM-222	ENST00000551339	KSR2	Q6VAB6	950 aa		12.41	□□□□□ -0.42
PFKM-222	ENST00000551339	MIER1	Q8N108	512 aa		12.41	□□□□□ -0.42
PFKM-222	ENST00000551339	MPND	Q8N594	471 aa		12.41	□□□□□ -0.42
PFKM-222	ENST00000551339	CCDC191	Q8NCU4	936 aa		12.41	□□□□□ -0.42
PFKM-222	ENST00000551339	ZNF521	Q96K83	1311 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	PI4KAP2	A4QPH2	592 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	PPIP5K2	O43314	1243 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	CAPN15	O75808	1086 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	SLC4A2	P04920	1241 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	AOC3	Q16853	763 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	DPP8	Q6V1X1	898 aa	Predicted RBP	12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	G2E3	Q7L622	706 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	TMC4	Q7Z404	712 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	PI4KAP1	Q8N8J0	262 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	SUPT20H	Q8NEM7	779 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	CELF1	Q92879	486 aa	Known RBP	12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	STK31	Q9BXU1	1019 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	MYH16	Q9H6N6	1097 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	HACL1	Q9UJ83	578 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	MAP3K2	Q9Y2U5	619 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	LAMB2	P55268	1798 aa		12.4	□□□□□ -0.42
PFKM-222	ENST00000551339	FANCI	Q9NVI1	1328 aa		12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	VAMP4	O75379	141 aa		12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	PCCA	P05165	728 aa	Predicted RBP	12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	IGKV5-2	P06315	115 aa		12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	EPHX2	P34913	555 aa		12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	LDHD	Q86WU2	507 aa		12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	NIM1K	Q8IY84	436 aa		12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	JARID2	Q92833	1246 aa	Predicted RBP	12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	CWC25	Q9NXE8	425 aa	Predicted RBP	12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	GJA3	Q9Y6H8	435 aa		12.39	□□□□□ -0.43
PFKM-222	ENST00000551339	DDX60	Q8IY21	1712 aa	Known RBP	12.38	□□□□□ -0.43
PFKM-222	ENST00000551339	RPS8	P62241	208 aa	Known RBP	12.38	□□□□□ -0.43
PFKM-222	ENST00000551339	KIAA2012	Q0VF49	1180 aa		12.38	□□□□□ -0.43
PFKM-222	ENST00000551339	KLRG1	Q96E93	195 aa		12.38	□□□□□ -0.43
PFKM-222	ENST00000551339	ZNRF3	Q9ULT6	936 aa		12.38	□□□□□ -0.43
PFKM-222	ENST00000551339	SCN4A	P35499	1836 aa		12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	PDE8A	O60658	829 aa		12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	ITGBL1	O95965	494 aa	Predicted RBP	12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	HSP90B1	P14625	803 aa	Known RBP	12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	EXOSC9	Q06265	439 aa	Known RBP	12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	CXCL9	Q07325	125 aa		12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	EAPP	Q56P03	285 aa	Predicted RBP	12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	PNMA8A	Q86V59	439 aa	Predicted RBP	12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	SEC31B	Q9NQW1	1179 aa		12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	TAF1	P21675	1872 aa		12.37	□□□□□ -0.43
PFKM-222	ENST00000551339	EPS15	P42566	896 aa		12.36	□□□□□ -0.43
PFKM-222	ENST00000551339	SCNN1D	P51172	638 aa		12.36	□□□□□ -0.43
PFKM-222	ENST00000551339	GPSM2	P81274	684 aa		12.36	□□□□□ -0.43
PFKM-222	ENST00000551339	JMY	Q8N9B5	988 aa		12.36	□□□□□ -0.43
PFKM-222	ENST00000551339	POLL	Q9UGP5	575 aa		12.36	□□□□□ -0.43
PFKM-222	ENST00000551339	CLEC11A	Q9Y240	323 aa		12.36	□□□□□ -0.43
PFKM-222	ENST00000551339	PASK	Q96RG2	1323 aa		12.36	□□□□□ -0.43
PFKM-222	ENST00000551339	CDHR2	Q9BYE9	1310 aa		12.36	□□□□□ -0.43
PFKM-222	ENST00000551339	COL4A1	P02462	1669 aa		12.35	□□□□□ -0.43
PFKM-222	ENST00000551339	NEURL1B	A8MQ27	555 aa		12.35	□□□□□ -0.43
PFKM-222	ENST00000551339		E9PSI1	815 aa		12.35	□□□□□ -0.43
PFKM-222	ENST00000551339	LMOD1	P29536	600 aa	Predicted RBP	12.35	□□□□□ -0.43
PFKM-222	ENST00000551339	NEXN	Q0ZGT2	675 aa		12.35	□□□□□ -0.43
PFKM-222	ENST00000551339	FLII	Q13045	1269 aa		12.35	□□□□□ -0.43
PFKM-222	ENST00000551339	CWF19L2	Q2TBE0	894 aa	Known RBP	12.35	□□□□□ -0.43
PFKM-222	ENST00000551339	CCDC152	Q4G0S7	254 aa		12.35	□□□□□ -0.43
PFKM-222	ENST00000551339	YDJC	A8MPS7	323 aa		12.34	□□□□□ -0.43
PFKM-222	ENST00000551339		H7C1W4	665 aa		12.34	□□□□□ -0.43
PFKM-222	ENST00000551339	WASHC4	Q2M389	1173 aa		12.34	□□□□□ -0.43
PFKM-222	ENST00000551339	MAP1S	Q66K74	1059 aa	Predicted RBP	12.34	□□□□□ -0.43
PFKM-222	ENST00000551339	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.34	□□□□□ -0.43
PFKM-222	ENST00000551339	CREBZF	Q9NS37	354 aa		12.34	□□□□□ -0.43
PFKM-222	ENST00000551339	C6orf229	H3BNL8	230 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	RIMBP2	O15034	1052 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	RAD17	O75943	681 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	SLC34A2	O95436	690 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	FKBP5	Q13451	457 aa	Predicted RBP	12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	GCKR	Q14397	625 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	TNIP1	Q15025	636 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	CIAPIN1	Q6FI81	312 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	TNS4	Q8IZW8	715 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	CNTROB	Q8N137	903 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	TTLL11	Q8NHH1	800 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	TBC1D16	Q8TBP0	767 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	PODXL2	Q9NZ53	605 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	GPRC5D	Q9NZD1	345 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	DUOX1	Q9NRD9	1551 aa		12.33	□□□□□ -0.44
PFKM-222	ENST00000551339	LRRC37A	A6NMS7	1700 aa		12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	LTBP1	Q14766	1721 aa		12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	GMPS	P49915	693 aa	Predicted RBP	12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	CTSW	P56202	376 aa		12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	SLFN5	Q08AF3	891 aa		12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	USP50	Q70EL3	339 aa	Predicted RBP	12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	DNAAF4	Q8WXU2	420 aa		12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	EYA3	Q99504	573 aa		12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	ADAMTSL1	Q8N6G6	1762 aa		12.32	□□□□□ -0.44
PFKM-222	ENST00000551339	CASP7	P55210	303 aa		12.31	□□□□□ -0.44

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