RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 RALBP1Q15311 655 aa19.4■□□□□ 0.7
TMEM106C-216ENST00000551305 CAPNS2Q96L46 248 aa19.4■□□□□ 0.7
TMEM106C-216ENST00000551305 CHL1O00533 1208 aa19.39■□□□□ 0.69
TMEM106C-216ENST00000551305 RAD17O75943 681 aa19.39■□□□□ 0.69
TMEM106C-216ENST00000551305 DDX46Q7L014 1031 aaKnown RBP19.39■□□□□ 0.69
TMEM106C-216ENST00000551305 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
TMEM106C-216ENST00000551305 KIAA2012Q0VF49 1180 aa19.38■□□□□ 0.69
TMEM106C-216ENST00000551305 GRAPQ13588 217 aa19.38■□□□□ 0.69
TMEM106C-216ENST00000551305 CIAPIN1Q6FI81 312 aa19.38■□□□□ 0.69
TMEM106C-216ENST00000551305 GRAPLQ8TC17 118 aaPredicted RBP19.38■□□□□ 0.69
TMEM106C-216ENST00000551305 CHPF2Q9P2E5 772 aa19.38■□□□□ 0.69
TMEM106C-216ENST00000551305 SHTN1A0MZ66 631 aa19.37■□□□□ 0.69
TMEM106C-216ENST00000551305 HIRAP54198 1017 aaPredicted RBP19.37■□□□□ 0.69
TMEM106C-216ENST00000551305 GPR101Q96P66 508 aaPredicted RBP19.37■□□□□ 0.69
TMEM106C-216ENST00000551305 GLIS2Q9BZE0 524 aaPredicted RBP19.37■□□□□ 0.69
TMEM106C-216ENST00000551305 TRIM35Q9UPQ4 493 aa19.37■□□□□ 0.69
TMEM106C-216ENST00000551305 TLL2Q9Y6L7 1015 aa19.37■□□□□ 0.69
TMEM106C-216ENST00000551305 LAMB2P55268 1798 aa19.37■□□□□ 0.69
TMEM106C-216ENST00000551305 YDJCA8MPS7 323 aa19.36■□□□□ 0.69
TMEM106C-216ENST00000551305 ECE1P42892 770 aa19.36■□□□□ 0.69
TMEM106C-216ENST00000551305 BCL2L13Q9BXK5 485 aa19.36■□□□□ 0.69
TMEM106C-216ENST00000551305 TAF1P21675 1872 aa19.36■□□□□ 0.69
TMEM106C-216ENST00000551305 AOC2O75106 756 aa19.35■□□□□ 0.69
TMEM106C-216ENST00000551305 CELF2O95319 508 aaKnown RBP19.35■□□□□ 0.69
TMEM106C-216ENST00000551305 ANKRD36CQ5JPF3 1778 aa19.35■□□□□ 0.69
TMEM106C-216ENST00000551305 ATP5J2-PTCD1G3V325 749 aa19.34■□□□□ 0.69
TMEM106C-216ENST00000551305 TNIP1Q15025 636 aa19.34■□□□□ 0.69
TMEM106C-216ENST00000551305 TRPM4Q8TD43 1214 aa19.34■□□□□ 0.69
TMEM106C-216ENST00000551305 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
TMEM106C-216ENST00000551305 TSKSQ9UJT2 592 aa19.34■□□□□ 0.69
TMEM106C-216ENST00000551305 DDX10Q13206 875 aaKnown RBP19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 HDGFL1Q5TGJ6 251 aa19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 ANKRD13DQ6ZTN6 518 aa19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 PLBD2Q8NHP8 589 aa19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 CELF1Q92879 486 aaKnown RBP19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 RUNDC1Q96C34 613 aa19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 ZNF408Q9H9D4 720 aa19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 PGAP2Q9UHJ9 254 aa19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 CNOT7Q9UIV1 285 aaKnown RBP19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 ZBTB12Q9Y330 459 aaPredicted RBP19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 TRPM7Q96QT4 1865 aa19.33■□□□□ 0.69
TMEM106C-216ENST00000551305 DLK2Q6UY11 383 aa19.32■□□□□ 0.68
TMEM106C-216ENST00000551305 SAPCD2Q86UD0 394 aa19.32■□□□□ 0.68
TMEM106C-216ENST00000551305 ABHD8Q96I13 439 aa19.32■□□□□ 0.68
TMEM106C-216ENST00000551305 ISCA1Q9BUE6 129 aa19.32■□□□□ 0.68
TMEM106C-216ENST00000551305 MYBBP1AQ9BQG0 1328 aaKnown RBP19.32■□□□□ 0.68
TMEM106C-216ENST00000551305 BEGAINQ9BUH8 593 aa19.32■□□□□ 0.68
TMEM106C-216ENST00000551305 NSFL1CQ9UNZ2 370 aaKnown RBP19.32■□□□□ 0.68
TMEM106C-216ENST00000551305 DUOX1Q9NRD9 1551 aa19.31■□□□□ 0.68
TMEM106C-216ENST00000551305 RIMBP2O15034 1052 aa19.31■□□□□ 0.68
TMEM106C-216ENST00000551305 WASHC4Q2M389 1173 aa19.31■□□□□ 0.68
TMEM106C-216ENST00000551305 MICALL2Q8IY33 904 aa19.31■□□□□ 0.68
TMEM106C-216ENST00000551305 DBNDD1Q9H9R9 158 aa19.31■□□□□ 0.68
TMEM106C-216ENST00000551305 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
TMEM106C-216ENST00000551305 COL4A1P02462 1669 aa19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 GPSM2P81274 684 aa19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 SF3B3Q15393 1217 aaKnown RBP19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 SAMD7Q7Z3H4 446 aa19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 ZC3H15Q8WU90 426 aaKnown RBP19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 KCNQ5Q9NR82 932 aa19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 DBF4Q9UBU7 674 aaPredicted RBP19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 POLLQ9UGP5 575 aa19.3■□□□□ 0.68
TMEM106C-216ENST00000551305 THSD7BQ9C0I4 1608 aa19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 CDHR2Q9BYE9 1310 aa19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 H7C1D1 291 aa19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 PSMD14O00487 310 aa19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 MAP2K2P36507 400 aa19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 WDR43Q15061 677 aaKnown RBP eCLIP19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 CDC37L1Q7L3B6 337 aa19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 USP48Q86UV5 1035 aa19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 DDX60Q8IY21 1712 aaKnown RBP19.29■□□□□ 0.68
TMEM106C-216ENST00000551305 C6orf229H3BNL8 230 aa19.28■□□□□ 0.68
TMEM106C-216ENST00000551305 HOXB7P09629 217 aa19.28■□□□□ 0.68
TMEM106C-216ENST00000551305 DOK7Q18PE1 504 aa19.28■□□□□ 0.68
TMEM106C-216ENST00000551305 IRS4O14654 1257 aaPredicted RBP19.27■□□□□ 0.68
TMEM106C-216ENST00000551305 EGFRP00533 1210 aa19.27■□□□□ 0.68
TMEM106C-216ENST00000551305 CFAP44Q96MT7 982 aa19.27■□□□□ 0.68
TMEM106C-216ENST00000551305 MBIPQ9NS73 344 aa19.27■□□□□ 0.68
TMEM106C-216ENST00000551305 HYPKQ9NX55 129 aa19.27■□□□□ 0.68
TMEM106C-216ENST00000551305 TBC1D10BQ4KMP7 808 aaPredicted RBP19.26■□□□□ 0.67
TMEM106C-216ENST00000551305 RBM26Q5T8P6 1007 aaKnown RBP19.26■□□□□ 0.67
TMEM106C-216ENST00000551305 ZIC5Q96T25 663 aa19.26■□□□□ 0.67
TMEM106C-216ENST00000551305 LRRC37AA6NMS7 1700 aa19.25■□□□□ 0.67
TMEM106C-216ENST00000551305 RPS8P62241 208 aaKnown RBP19.25■□□□□ 0.67
TMEM106C-216ENST00000551305 DPF2Q92785 391 aa19.25■□□□□ 0.67
TMEM106C-216ENST00000551305 HHIPL1Q96JK4 782 aa19.25■□□□□ 0.67
TMEM106C-216ENST00000551305 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
TMEM106C-216ENST00000551305 RTL9Q8NET4 1388 aa19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 CCDC85CA6NKD9 419 aa19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 ELL2O00472 640 aaPredicted RBP19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 ECE2O60344 883 aa19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 TRIM28Q13263 835 aaKnown RBP19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 RIC3Q7Z5B4 369 aa19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 TBC1D16Q8TBP0 767 aa19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 JARID2Q92833 1246 aaPredicted RBP19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 SEC31BQ9NQW1 1179 aa19.24■□□□□ 0.67
TMEM106C-216ENST00000551305 ZNF853P0CG23 659 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms