RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 LAMB2P55268 1798 aa16.96■□□□□ 0.31
CEP290-205ENST00000550962 KIF3CO14782 793 aa16.95■□□□□ 0.3
CEP290-205ENST00000550962 VEGFAP15692 232 aaPredicted RBP16.95■□□□□ 0.3
CEP290-205ENST00000550962 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
CEP290-205ENST00000550962 LINS1Q8NG48 757 aa16.95■□□□□ 0.3
CEP290-205ENST00000550962 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
CEP290-205ENST00000550962 DICER1Q9UPY3 1922 aaKnown RBP16.95■□□□□ 0.3
CEP290-205ENST00000550962 DDX60Q8IY21 1712 aaKnown RBP16.94■□□□□ 0.3
CEP290-205ENST00000550962 NEURL1BA8MQ27 555 aa16.94■□□□□ 0.3
CEP290-205ENST00000550962 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
CEP290-205ENST00000550962 OLFM4Q6UX06 510 aa16.94■□□□□ 0.3
CEP290-205ENST00000550962 MPNDQ8N594 471 aa16.94■□□□□ 0.3
CEP290-205ENST00000550962 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
CEP290-205ENST00000550962 IGKV5-2P06315 115 aa16.93■□□□□ 0.3
CEP290-205ENST00000550962 CT47B1P0C2W7 299 aaPredicted RBP16.93■□□□□ 0.3
CEP290-205ENST00000550962 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
CEP290-205ENST00000550962 LARGE2Q8N3Y3 721 aa16.93■□□□□ 0.3
CEP290-205ENST00000550962 RRAGCQ9HB90 399 aa16.93■□□□□ 0.3
CEP290-205ENST00000550962 IQCA1LA6NCM1 817 aa16.92■□□□□ 0.3
CEP290-205ENST00000550962 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
CEP290-205ENST00000550962 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
CEP290-205ENST00000550962 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
CEP290-205ENST00000550962 RBM46Q8TBY0 533 aaKnown RBP16.92■□□□□ 0.3
CEP290-205ENST00000550962 CDC5LQ99459 802 aaKnown RBP16.92■□□□□ 0.3
CEP290-205ENST00000550962 SNED1Q8TER0 1413 aa16.92■□□□□ 0.3
CEP290-205ENST00000550962 CTSWP56202 376 aa16.91■□□□□ 0.3
CEP290-205ENST00000550962 RPS8P62241 208 aaKnown RBP16.91■□□□□ 0.3
CEP290-205ENST00000550962 GCKRQ14397 625 aa16.91■□□□□ 0.3
CEP290-205ENST00000550962 UBE3BQ7Z3V4 1068 aa16.91■□□□□ 0.3
CEP290-205ENST00000550962 MIER1Q8N108 512 aa16.91■□□□□ 0.3
CEP290-205ENST00000550962 FSTL1Q12841 308 aa16.9■□□□□ 0.3
CEP290-205ENST00000550962 ALDH1L2Q3SY69 923 aa16.9■□□□□ 0.3
CEP290-205ENST00000550962 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
CEP290-205ENST00000550962 RTFDC1Q9BY42 306 aaPredicted RBP16.9■□□□□ 0.3
CEP290-205ENST00000550962 PTPRCP08575 1304 aa16.9■□□□□ 0.3
CEP290-205ENST00000550962 H7C1W4 665 aa16.89■□□□□ 0.29
CEP290-205ENST00000550962 FZD9O00144 591 aa16.89■□□□□ 0.29
CEP290-205ENST00000550962 CELF1Q92879 486 aaKnown RBP16.89■□□□□ 0.29
CEP290-205ENST00000550962 EYA3Q99504 573 aa16.89■□□□□ 0.29
CEP290-205ENST00000550962 WDR90Q96KV7 1748 aa16.89■□□□□ 0.29
CEP290-205ENST00000550962 ALDH1L1O75891 902 aa16.88■□□□□ 0.29
CEP290-205ENST00000550962 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
CEP290-205ENST00000550962 SLC4A10Q6U841 1118 aa16.88■□□□□ 0.29
CEP290-205ENST00000550962 GPC2Q8N158 579 aa16.88■□□□□ 0.29
CEP290-205ENST00000550962 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
CEP290-205ENST00000550962 SRCIN1Q9C0H9 1055 aa16.88■□□□□ 0.29
CEP290-205ENST00000550962 NSFL1CQ9UNZ2 370 aaKnown RBP16.88■□□□□ 0.29
CEP290-205ENST00000550962 RTL9Q8NET4 1388 aa16.88■□□□□ 0.29
CEP290-205ENST00000550962 F6X3S4 739 aa16.87■□□□□ 0.29
CEP290-205ENST00000550962 KIAA2012Q0VF49 1180 aa16.87■□□□□ 0.29
CEP290-205ENST00000550962 AOC3Q16853 763 aa16.87■□□□□ 0.29
CEP290-205ENST00000550962 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
CEP290-205ENST00000550962 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
CEP290-205ENST00000550962 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
CEP290-205ENST00000550962 L3MBTL3Q96JM7 780 aaPredicted RBP16.87■□□□□ 0.29
CEP290-205ENST00000550962 PLA2G12BQ9BX93 195 aa16.87■□□□□ 0.29
CEP290-205ENST00000550962 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
CEP290-205ENST00000550962 C9orf78Q9NZ63 289 aaPredicted RBP16.87■□□□□ 0.29
CEP290-205ENST00000550962 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
CEP290-205ENST00000550962 HSPA6P17066 643 aa16.86■□□□□ 0.29
CEP290-205ENST00000550962 LMOD1P29536 600 aaPredicted RBP16.86■□□□□ 0.29
CEP290-205ENST00000550962 IGHMBP2P38935 993 aaKnown RBP16.86■□□□□ 0.29
CEP290-205ENST00000550962 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
CEP290-205ENST00000550962 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
CEP290-205ENST00000550962 TTLL11Q8NHH1 800 aa16.86■□□□□ 0.29
CEP290-205ENST00000550962 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
CEP290-205ENST00000550962 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
CEP290-205ENST00000550962 ANKIB1Q9P2G1 1089 aa16.86■□□□□ 0.29
CEP290-205ENST00000550962 LRRC37AA6NMS7 1700 aa16.86■□□□□ 0.29
CEP290-205ENST00000550962 GRM8O00222 908 aa16.85■□□□□ 0.29
CEP290-205ENST00000550962 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
CEP290-205ENST00000550962 WASHC4Q2M389 1173 aa16.85■□□□□ 0.29
CEP290-205ENST00000550962 HACL1Q9UJ83 578 aa16.85■□□□□ 0.29
CEP290-205ENST00000550962 ZNRF3Q9ULT6 936 aa16.85■□□□□ 0.29
CEP290-205ENST00000550962 ZNF541Q9H0D2 1346 aa16.85■□□□□ 0.29
CEP290-205ENST00000550962 G3V3G9 751 aa16.84■□□□□ 0.29
CEP290-205ENST00000550962 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
CEP290-205ENST00000550962 SSH1Q8WYL5 1049 aa16.84■□□□□ 0.29
CEP290-205ENST00000550962 PODXL2Q9NZ53 605 aa16.84■□□□□ 0.29
CEP290-205ENST00000550962 GGA1Q9UJY5 639 aa16.84■□□□□ 0.29
CEP290-205ENST00000550962 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
CEP290-205ENST00000550962 MYH3P11055 1940 aa16.84■□□□□ 0.29
CEP290-205ENST00000550962 XDHP47989 1333 aa16.83■□□□□ 0.28
CEP290-205ENST00000550962 GPSM2P81274 684 aa16.83■□□□□ 0.28
CEP290-205ENST00000550962 TNIP1Q15025 636 aa16.83■□□□□ 0.28
CEP290-205ENST00000550962 PNMA8AQ86V59 439 aaPredicted RBP16.83■□□□□ 0.28
CEP290-205ENST00000550962 MPHOSPH8Q99549 860 aa16.83■□□□□ 0.28
CEP290-205ENST00000550962 ZC3H12CQ9C0D7 883 aaKnown RBP16.83■□□□□ 0.28
CEP290-205ENST00000550962 GREM2Q9H772 168 aa16.83■□□□□ 0.28
CEP290-205ENST00000550962 BSDC1Q9NW68 430 aaPredicted RBP16.83■□□□□ 0.28
CEP290-205ENST00000550962 SCN4AP35499 1836 aa16.82■□□□□ 0.28
CEP290-205ENST00000550962 ANKRD18BA2A2Z9 1011 aa16.82■□□□□ 0.28
CEP290-205ENST00000550962 UFL1O94874 794 aa16.82■□□□□ 0.28
CEP290-205ENST00000550962 ITGA6P23229 1130 aa16.82■□□□□ 0.28
CEP290-205ENST00000550962 APLP1P51693 650 aa16.82■□□□□ 0.28
CEP290-205ENST00000550962 BCL2L13Q9BXK5 485 aa16.82■□□□□ 0.28
CEP290-205ENST00000550962 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
CEP290-205ENST00000550962 KIF16BQ96L93 1317 aa16.81■□□□□ 0.28
CEP290-205ENST00000550962 CSF1RP07333 972 aa16.81■□□□□ 0.28
CEP290-205ENST00000550962 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms