RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
CALCOCO1-218ENST00000550804 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
CALCOCO1-218ENST00000550804 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
CALCOCO1-218ENST00000550804 KCNB2Q92953 911 aa17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 SMC3Q9UQE7 1217 aa17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 RABL6Q3YEC7 729 aaPredicted RBP17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 TRIM44Q96DX7 344 aaPredicted RBP17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
CALCOCO1-218ENST00000550804 ESPNB1AK53 854 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 STX6O43752 255 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 RNF214Q8ND24 703 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
CALCOCO1-218ENST00000550804 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 TOGARAM1Q9Y4F4 1720 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 ZSCAN22P10073 491 aaPredicted RBP17■□□□□ 0.31
CALCOCO1-218ENST00000550804 GJB2P29033 226 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 FOXO4P98177 505 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 UBR2Q8IWV8 1755 aa17■□□□□ 0.31
CALCOCO1-218ENST00000550804 TNS2Q63HR2 1409 aa16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 NUTM2BA6NNL0 878 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 NUTM2EB1AL46 878 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 EXOC5O00471 708 aa16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 TIMM10P62072 90 aa16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 NUTM2AQ8IVF1 878 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 PIGBQ92521 554 aa16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 COL15A1P39059 1388 aa16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 LRSAM1Q6UWE0 723 aa16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 ZNF594Q96JF6 807 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 TM6SF1Q9BZW5 370 aa16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 PAPPAQ13219 1627 aa16.99■□□□□ 0.31
CALCOCO1-218ENST00000550804 TAF5LO75529 589 aa16.98■□□□□ 0.31
CALCOCO1-218ENST00000550804 PPP1R9BQ96SB3 815 aa16.98■□□□□ 0.31
CALCOCO1-218ENST00000550804 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
CALCOCO1-218ENST00000550804 H7C1W4 665 aa16.98■□□□□ 0.31
CALCOCO1-218ENST00000550804 ATP5JP18859 108 aa16.98■□□□□ 0.31
CALCOCO1-218ENST00000550804 CLCN1P35523 988 aa16.98■□□□□ 0.31
CALCOCO1-218ENST00000550804 NEUROD6Q96NK8 337 aa16.98■□□□□ 0.31
CALCOCO1-218ENST00000550804 ASAP1Q9ULH1 1129 aa16.98■□□□□ 0.31
CALCOCO1-218ENST00000550804 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
CALCOCO1-218ENST00000550804 HIP1O00291 1037 aa16.97■□□□□ 0.31
CALCOCO1-218ENST00000550804 LAMB4A4D0S4 1761 aa16.97■□□□□ 0.31
CALCOCO1-218ENST00000550804 SPATA31A1Q5TZJ5 1347 aa16.97■□□□□ 0.31
CALCOCO1-218ENST00000550804 MBD3O95983 291 aa16.96■□□□□ 0.31
CALCOCO1-218ENST00000550804 CCDC173Q0VFZ6 552 aa16.96■□□□□ 0.31
CALCOCO1-218ENST00000550804 LRRC24Q50LG9 513 aa16.96■□□□□ 0.31
CALCOCO1-218ENST00000550804 ATG9AQ7Z3C6 839 aa16.96■□□□□ 0.31
CALCOCO1-218ENST00000550804 SNRKQ9NRH2 765 aa16.96■□□□□ 0.31
CALCOCO1-218ENST00000550804 PLCH1Q4KWH8 1693 aa16.96■□□□□ 0.31
CALCOCO1-218ENST00000550804 F13A1P00488 732 aa16.96■□□□□ 0.31
CALCOCO1-218ENST00000550804 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
CALCOCO1-218ENST00000550804 FIBPO43427 364 aa16.95■□□□□ 0.3
CALCOCO1-218ENST00000550804 DNM1Q05193 864 aaKnown RBP16.95■□□□□ 0.3
CALCOCO1-218ENST00000550804 STK3Q13188 491 aa16.95■□□□□ 0.3
CALCOCO1-218ENST00000550804 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
CALCOCO1-218ENST00000550804 MTMR6Q9Y217 621 aa16.95■□□□□ 0.3
CALCOCO1-218ENST00000550804 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
CALCOCO1-218ENST00000550804 PUS3Q9BZE2 481 aaKnown RBP16.95■□□□□ 0.3
CALCOCO1-218ENST00000550804 MED23Q9ULK4 1368 aa16.95■□□□□ 0.3
CALCOCO1-218ENST00000550804 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
CALCOCO1-218ENST00000550804 CWC25Q9NXE8 425 aaPredicted RBP16.94■□□□□ 0.3
CALCOCO1-218ENST00000550804 THRAP3Q9Y2W1 955 aaKnown RBP16.94■□□□□ 0.3
CALCOCO1-218ENST00000550804 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
CALCOCO1-218ENST00000550804 TOB2Q14106 344 aaPredicted RBP16.94■□□□□ 0.3
CALCOCO1-218ENST00000550804 BLOC1S2Q6QNY1 142 aa16.94■□□□□ 0.3
CALCOCO1-218ENST00000550804 FERMT3Q86UX7 667 aa16.94■□□□□ 0.3
CALCOCO1-218ENST00000550804 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
CALCOCO1-218ENST00000550804 ZSCAN31Q96LW9 406 aaPredicted RBP16.93■□□□□ 0.3
CALCOCO1-218ENST00000550804 HAUS7Q99871 368 aa16.93■□□□□ 0.3
CALCOCO1-218ENST00000550804 CDCA7Q9BWT1 371 aaPredicted RBP16.93■□□□□ 0.3
CALCOCO1-218ENST00000550804 GOLIM4O00461 696 aa16.93■□□□□ 0.3
CALCOCO1-218ENST00000550804 RPS6KB1P23443 525 aa16.93■□□□□ 0.3
CALCOCO1-218ENST00000550804 PSMA5P28066 241 aa16.93■□□□□ 0.3
CALCOCO1-218ENST00000550804 SH2B1Q9NRF2 756 aaPredicted RBP16.93■□□□□ 0.3
CALCOCO1-218ENST00000550804 BCL9O00512 1426 aa16.92■□□□□ 0.3
CALCOCO1-218ENST00000550804 SPATA31A5Q5VU36 1347 aa16.92■□□□□ 0.3
CALCOCO1-218ENST00000550804 SPATA31A7Q8IWB4 1347 aa16.92■□□□□ 0.3
CALCOCO1-218ENST00000550804 RNF20Q5VTR2 975 aa16.92■□□□□ 0.3
CALCOCO1-218ENST00000550804 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
CALCOCO1-218ENST00000550804 LRRC2Q9BYS8 371 aa16.92■□□□□ 0.3
CALCOCO1-218ENST00000550804 ITGB4P16144 1822 aa16.92■□□□□ 0.3
CALCOCO1-218ENST00000550804 SLIT2O94813 1529 aa16.92■□□□□ 0.3
CALCOCO1-218ENST00000550804 A0A0G2JLW4 131 aa16.91■□□□□ 0.3
CALCOCO1-218ENST00000550804 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
CALCOCO1-218ENST00000550804 DNAJC10Q8IXB1 793 aa16.91■□□□□ 0.3
CALCOCO1-218ENST00000550804 SYNE4Q8N205 404 aa16.91■□□□□ 0.3
CALCOCO1-218ENST00000550804 ZNF609O15014 1411 aa16.91■□□□□ 0.3
CALCOCO1-218ENST00000550804 CYP21A2P08686 494 aa16.91■□□□□ 0.3
CALCOCO1-218ENST00000550804 DDB1Q16531 1140 aa16.91■□□□□ 0.3
CALCOCO1-218ENST00000550804 USPL1Q5W0Q7 1092 aa16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms