RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
ATP2B1-207ENST00000550716 ZPR1O75312 459 aa11.78□□□□□ -0.52
ATP2B1-207ENST00000550716 TOMM70O94826 608 aa11.78□□□□□ -0.52
ATP2B1-207ENST00000550716 CANXP27824 592 aaKnown RBP11.78□□□□□ -0.52
ATP2B1-207ENST00000550716 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
ATP2B1-207ENST00000550716 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.78□□□□□ -0.52
ATP2B1-207ENST00000550716 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.52
ATP2B1-207ENST00000550716 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.53
ATP2B1-207ENST00000550716 DNAJC5GQ8N7S2 189 aa11.77□□□□□ -0.53
ATP2B1-207ENST00000550716 IL17REQ8NFR9 667 aa11.77□□□□□ -0.53
ATP2B1-207ENST00000550716 NRXN2Q9P2S2 1712 aa11.77□□□□□ -0.53
ATP2B1-207ENST00000550716 SERPINB2P05120 415 aa11.76□□□□□ -0.53
ATP2B1-207ENST00000550716 APLP1P51693 650 aa11.76□□□□□ -0.53
ATP2B1-207ENST00000550716 EIF5P55010 431 aaKnown RBP11.76□□□□□ -0.53
ATP2B1-207ENST00000550716 BICDL1Q6ZP65 573 aa11.76□□□□□ -0.53
ATP2B1-207ENST00000550716 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
ATP2B1-207ENST00000550716 ZNF496Q96IT1 587 aaPredicted RBP11.76□□□□□ -0.53
ATP2B1-207ENST00000550716 ADGRG1Q9Y653 693 aa11.76□□□□□ -0.53
ATP2B1-207ENST00000550716 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
ATP2B1-207ENST00000550716 U2SURPO15042 1029 aaKnown RBP11.75□□□□□ -0.53
ATP2B1-207ENST00000550716 RNF40O75150 1001 aa11.75□□□□□ -0.53
ATP2B1-207ENST00000550716 FECHP22830 423 aa11.75□□□□□ -0.53
ATP2B1-207ENST00000550716 RBM46Q8TBY0 533 aaKnown RBP11.75□□□□□ -0.53
ATP2B1-207ENST00000550716 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
ATP2B1-207ENST00000550716 NFKBIEO00221 500 aa11.74□□□□□ -0.53
ATP2B1-207ENST00000550716 KCNQ3O43525 872 aa11.74□□□□□ -0.53
ATP2B1-207ENST00000550716 TBC1D9BQ66K14 1250 aa11.74□□□□□ -0.53
ATP2B1-207ENST00000550716 C2CD5Q86YS7 1000 aa11.74□□□□□ -0.53
ATP2B1-207ENST00000550716 RRAGCQ9HB90 399 aa11.74□□□□□ -0.53
ATP2B1-207ENST00000550716 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
ATP2B1-207ENST00000550716 HEG1Q9ULI3 1381 aa11.74□□□□□ -0.53
ATP2B1-207ENST00000550716 PCNTO95613 3336 aa11.73□□□□□ -0.53
ATP2B1-207ENST00000550716 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
ATP2B1-207ENST00000550716 ZNF790Q6PG37 636 aa11.73□□□□□ -0.53
ATP2B1-207ENST00000550716 TTC5Q8N0Z6 440 aa11.73□□□□□ -0.53
ATP2B1-207ENST00000550716 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
ATP2B1-207ENST00000550716 NPC1L1Q9UHC9 1359 aa11.73□□□□□ -0.53
ATP2B1-207ENST00000550716 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
ATP2B1-207ENST00000550716 DLEC1Q9Y238 1755 aa11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 CEMIPQ8WUJ3 1361 aa11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 KDM2BQ8NHM5 1336 aa11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 PRAMEF22A3QJZ6 481 aa11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 A1BGP04217 495 aa11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 ZNF330Q9Y3S2 320 aaPredicted RBP11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 COL11A2P13942 1736 aaPredicted RBP11.72□□□□□ -0.53
ATP2B1-207ENST00000550716 STARD3NLO95772 234 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 TEFQ10587 303 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 PRR5LQ6MZQ0 368 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 GAS2L2Q8NHY3 880 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 WBP1LQ9NX94 342 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 ANKRD31Q8N7Z5 1873 aa11.71□□□□□ -0.53
ATP2B1-207ENST00000550716 SBF1O95248 1867 aa11.7□□□□□ -0.54
ATP2B1-207ENST00000550716 CAMTA2O94983 1202 aa11.7□□□□□ -0.54
ATP2B1-207ENST00000550716 LMNB1P20700 586 aa11.7□□□□□ -0.54
ATP2B1-207ENST00000550716 DNAJB2P25686 324 aa11.7□□□□□ -0.54
ATP2B1-207ENST00000550716 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
ATP2B1-207ENST00000550716 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
ATP2B1-207ENST00000550716 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
ATP2B1-207ENST00000550716 H0YIN7 160 aa11.69□□□□□ -0.54
ATP2B1-207ENST00000550716 FSTL1Q12841 308 aa11.69□□□□□ -0.54
ATP2B1-207ENST00000550716 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
ATP2B1-207ENST00000550716 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
ATP2B1-207ENST00000550716 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
ATP2B1-207ENST00000550716 A0A087WZG4 1122 aa11.68□□□□□ -0.54
ATP2B1-207ENST00000550716 GLTPD2A6NH11 291 aa11.68□□□□□ -0.54
ATP2B1-207ENST00000550716 POTECB2RU33 542 aa11.68□□□□□ -0.54
ATP2B1-207ENST00000550716 C21orf2O43822 256 aa11.68□□□□□ -0.54
ATP2B1-207ENST00000550716 IL6STP40189 918 aaPredicted RBP11.68□□□□□ -0.54
ATP2B1-207ENST00000550716 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.54
ATP2B1-207ENST00000550716 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
ATP2B1-207ENST00000550716 ZC3H4Q9UPT8 1303 aaKnown RBP11.67□□□□□ -0.54
ATP2B1-207ENST00000550716 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
ATP2B1-207ENST00000550716 BTBD11A6QL63 1104 aa11.67□□□□□ -0.54
ATP2B1-207ENST00000550716 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
ATP2B1-207ENST00000550716 MCM10Q7L590 875 aa11.67□□□□□ -0.54
ATP2B1-207ENST00000550716 PXYLP1Q8TE99 480 aa11.67□□□□□ -0.54
ATP2B1-207ENST00000550716 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
ATP2B1-207ENST00000550716 OATP04181 439 aa11.66□□□□□ -0.54
ATP2B1-207ENST00000550716 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
ATP2B1-207ENST00000550716 PPP4CP60510 307 aa11.66□□□□□ -0.54
ATP2B1-207ENST00000550716 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
ATP2B1-207ENST00000550716 DZIP3Q86Y13 1208 aaKnown RBP11.66□□□□□ -0.54
ATP2B1-207ENST00000550716 JMYQ8N9B5 988 aa11.66□□□□□ -0.54
ATP2B1-207ENST00000550716 SMC1BQ8NDV3 1235 aa11.66□□□□□ -0.54
ATP2B1-207ENST00000550716 BCORQ6W2J9 1755 aa11.66□□□□□ -0.54
ATP2B1-207ENST00000550716 SLC4A3P48751 1232 aa11.65□□□□□ -0.54
ATP2B1-207ENST00000550716 NBPF10Q6P3W6 841 aaKnown RBP11.65□□□□□ -0.54
ATP2B1-207ENST00000550716 NYAP1Q6ZVC0 841 aa11.65□□□□□ -0.54
ATP2B1-207ENST00000550716 SLF2Q8IX21 1173 aa11.65□□□□□ -0.54
ATP2B1-207ENST00000550716 NBPF15Q8N660 670 aa11.65□□□□□ -0.54
ATP2B1-207ENST00000550716 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms