RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 GOLGA6BA6NDN3 693 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 RAB11FIP3O75154 756 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 NUCB1Q02818 461 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 RGS22Q8NE09 1264 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 BSDC1Q9NW68 430 aaPredicted RBP10□□□□□ -0.81
PPFIA2-220ENST00000550584 INTS8Q75QN2 995 aaKnown RBP10□□□□□ -0.81
PPFIA2-220ENST00000550584 NUP88Q99567 741 aaPredicted RBP10□□□□□ -0.81
PPFIA2-220ENST00000550584 HDGFP51858 240 aaKnown RBP10□□□□□ -0.81
PPFIA2-220ENST00000550584 DRP2Q13474 957 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 WDR78Q5VTH9 848 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 P3H4Q92791 437 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 NAPGQ99747 312 aaPredicted RBP10□□□□□ -0.81
PPFIA2-220ENST00000550584 CAPS2Q9BXY5 557 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 ANKRD62A6NC57 917 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 F13A1P00488 732 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 PRPHP41219 470 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 GIMAP6Q6P9H5 292 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 PDCD7Q8N8D1 485 aaKnown RBP10□□□□□ -0.81
PPFIA2-220ENST00000550584 LZICQ8WZA0 190 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 NPHP3Q7Z494 1330 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 EVC2Q86UK5 1308 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 ZSCAN20P17040 1043 aaPredicted RBP9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 TSPYL2Q9H2G4 693 aaPredicted RBP9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 CTNNBL1Q8WYA6 563 aaPredicted RBP9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 OSBPL9Q96SU4 736 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 PSD3Q9NYI0 1048 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 PHLPP2Q6ZVD8 1323 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 GCFC2P16383 781 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 TNNC1P63316 161 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 CLUL1Q15846 466 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 NBPF10Q6P3W6 841 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 TCP11L2Q8N4U5 519 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 CCDC113Q9H0I3 377 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 CKAP2LQ8IYA6 745 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 TMX3Q96JJ7 454 aa9.99□□□□□ -0.81
PPFIA2-220ENST00000550584 ZEB2O60315 1214 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 UBTFL1P0CB47 393 aaPredicted RBP9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 FSIP1Q8NA03 581 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 Q9H521 79 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 CCDC141Q6ZP82 1450 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 ARHGAP6O43182 974 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 CCDC178Q5BJE1 867 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 SDCCAG8Q86SQ7 713 aaPredicted RBP9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 TRIM22Q8IYM9 498 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 SMC1BQ8NDV3 1235 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 USP6NLQ92738 828 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 IQCDQ96DY2 449 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 IQCGQ9H095 443 aaKnown RBP9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 CYP2C19P33261 490 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 LMBRD1Q9NUN5 540 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 MTUS1Q9ULD2 1270 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 PAIP2BQ9ULR5 123 aaKnown RBP9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 ATP2C2O75185 946 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 DDX58O95786 925 aaKnown RBP9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 LIG3P49916 1009 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 RARSP54136 660 aaKnown RBP9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 CNGA4Q8IV77 575 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 IFT20Q8IY31 132 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 FSD1Q9BTV5 496 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 JADE2Q9NQC1 790 aa9.98□□□□□ -0.81
PPFIA2-220ENST00000550584 NPM1P06748 294 aaKnown RBP eCLIP9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 KCNG4Q8TDN1 519 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 UIMC1Q96RL1 719 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 CTNNA3Q9UI47 895 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 SCOCQ9UIL1 159 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 TSKSQ9UJT2 592 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 EVI5O60447 810 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 PEX19P40855 299 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 CRYMQ14894 314 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 DUSP27Q5VZP5 1158 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 JPH2Q9BR39 696 aaPredicted RBP9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 WDHD1O75717 1129 aaPredicted RBP9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 MAP3K21Q5TCX8 1036 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 ZSCAN25Q6NSZ9 544 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 KIAA1524Q8TCG1 905 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 EIF3CQ99613 913 aaKnown RBP9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 BCAP29Q9UHQ4 241 aa9.97□□□□□ -0.81
PPFIA2-220ENST00000550584 GJB2P29033 226 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 EXOSC9Q06265 439 aaKnown RBP9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 CCDC152Q4G0S7 254 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 LMBR1Q8WVP7 490 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 GDAP1L1Q96MZ0 367 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 CARD6Q9BX69 1037 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 BAIAP2L1Q9UHR4 511 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 TTC22Q5TAA0 569 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 LMOD2Q6P5Q4 547 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 TEX9Q8N6V9 391 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 TRPC3Q13507 836 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 MUM1Q2TAK8 710 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 TAOK1Q7L7X3 1001 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 SEC62Q99442 399 aaKnown RBP9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 RMND1Q9NWS8 449 aa9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 PPP1R1BQ9UD71 204 aaPredicted RBP9.96□□□□□ -0.81
PPFIA2-220ENST00000550584 SRLQ86TD4 932 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 CCDC170Q8IYT3 715 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 CENPKQ9BS16 269 aa9.96□□□□□ -0.82
PPFIA2-220ENST00000550584 MIS12Q9H081 205 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms