RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 IL1RAPL2Q9NP60 686 aa15.39■□□□□ 0.05
CACNB3-217ENST00000550483 ECHDC1Q9NTX5 307 aa15.39■□□□□ 0.05
CACNB3-217ENST00000550483 STK32BQ9NY57 414 aa15.39■□□□□ 0.05
CACNB3-217ENST00000550483 IRS4O14654 1257 aaPredicted RBP15.38■□□□□ 0.05
CACNB3-217ENST00000550483 GPTP24298 496 aa15.38■□□□□ 0.05
CACNB3-217ENST00000550483 CTSWP56202 376 aa15.38■□□□□ 0.05
CACNB3-217ENST00000550483 IFIT5Q13325 482 aaKnown RBP15.38■□□□□ 0.05
CACNB3-217ENST00000550483 SLC15A2Q16348 729 aa15.38■□□□□ 0.05
CACNB3-217ENST00000550483 TXNRD1Q16881 649 aa15.38■□□□□ 0.05
CACNB3-217ENST00000550483 NYXQ9GZU5 481 aa15.38■□□□□ 0.05
CACNB3-217ENST00000550483 PA2G4Q9UQ80 394 aaKnown RBP15.38■□□□□ 0.05
CACNB3-217ENST00000550483 CHMP3Q9Y3E7 222 aa15.38■□□□□ 0.05
CACNB3-217ENST00000550483 RTL9Q8NET4 1388 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 EYA2O00167 538 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 GNPATO15228 680 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 ZPR1O75312 459 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 SASH1O94885 1247 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 SDSP20132 328 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 TICAM2Q86XR7 235 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 OTUD7AQ8TE49 926 aaPredicted RBP15.37■□□□□ 0.05
CACNB3-217ENST00000550483 FAM89AQ96GI7 184 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
CACNB3-217ENST00000550483 UBN2Q6ZU65 1347 aa15.37■□□□□ 0.05
CACNB3-217ENST00000550483 MYH14Q7Z406 1995 aaKnown RBP15.36■□□□□ 0.05
CACNB3-217ENST00000550483 ANKRD18BA2A2Z9 1011 aa15.36■□□□□ 0.05
CACNB3-217ENST00000550483 EPB41L2O43491 1005 aaKnown RBP15.36■□□□□ 0.05
CACNB3-217ENST00000550483 TAF7LQ5H9L4 462 aa15.36■□□□□ 0.05
CACNB3-217ENST00000550483 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
CACNB3-217ENST00000550483 AACSQ86V21 672 aa15.36■□□□□ 0.05
CACNB3-217ENST00000550483 CNTROBQ8N137 903 aa15.36■□□□□ 0.05
CACNB3-217ENST00000550483 CHD4Q14839 1912 aa15.36■□□□□ 0.05
CACNB3-217ENST00000550483 TAF1LQ8IZX4 1826 aa15.36■□□□□ 0.05
CACNB3-217ENST00000550483 REC8O95072 547 aa15.35■□□□□ 0.05
CACNB3-217ENST00000550483 SSFA2P28290 1259 aa15.35■□□□□ 0.05
CACNB3-217ENST00000550483 GPR162Q16538 588 aa15.35■□□□□ 0.05
CACNB3-217ENST00000550483 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
CACNB3-217ENST00000550483 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
CACNB3-217ENST00000550483 TBC1D32Q96NH3 1257 aa15.35■□□□□ 0.05
CACNB3-217ENST00000550483 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
CACNB3-217ENST00000550483 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
CACNB3-217ENST00000550483 LAMB2P55268 1798 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 NTSR2O95665 410 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 CCDC152Q4G0S7 254 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 SUSD4Q5VX71 490 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 NUTM1Q86Y26 1132 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 IL27Q8NEV9 243 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 TTLL11Q8NHH1 800 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 PI4K2BQ8TCG2 481 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 IPO9Q96P70 1041 aaKnown RBP15.34■□□□□ 0.05
CACNB3-217ENST00000550483 SIL1Q9H173 461 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
CACNB3-217ENST00000550483 HIP1O00291 1037 aa15.33■□□□□ 0.04
CACNB3-217ENST00000550483 RFC4P35249 363 aa15.33■□□□□ 0.04
CACNB3-217ENST00000550483 RTL5Q5HYW3 569 aaPredicted RBP15.33■□□□□ 0.04
CACNB3-217ENST00000550483 CEP126Q9P2H0 1117 aa15.33■□□□□ 0.04
CACNB3-217ENST00000550483 RGPD3A6NKT7 1758 aaPredicted RBP15.33■□□□□ 0.04
CACNB3-217ENST00000550483 RGPD4Q7Z3J3 1758 aa15.33■□□□□ 0.04
CACNB3-217ENST00000550483 TRIM6-TRIM34B2RNG4 842 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 ITGA6P23229 1130 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 RBM25P49756 843 aaKnown RBP15.32■□□□□ 0.04
CACNB3-217ENST00000550483 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
CACNB3-217ENST00000550483 SLC10A5Q5PT55 438 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 ATG9AQ7Z3C6 839 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 EAF2Q96CJ1 260 aaPredicted RBP15.32■□□□□ 0.04
CACNB3-217ENST00000550483 EVI5LQ96CN4 794 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 SETDB2Q96T68 719 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 RFX7Q2KHR2 1363 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 ABCC12Q96J65 1359 aa15.32■□□□□ 0.04
CACNB3-217ENST00000550483 ATP5JP18859 108 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 TFCP2Q12800 502 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 FLAD1Q8NFF5 587 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 KLHDC4Q8TBB5 520 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.31■□□□□ 0.04
CACNB3-217ENST00000550483 RUFY2Q8WXA3 655 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 ARHGEF1Q92888 912 aaKnown RBP15.31■□□□□ 0.04
CACNB3-217ENST00000550483 BCL11AQ9H165 835 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 COL24A1Q17RW2 1714 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 MYH3P11055 1940 aa15.31■□□□□ 0.04
CACNB3-217ENST00000550483 ZNF609O15014 1411 aa15.3■□□□□ 0.04
CACNB3-217ENST00000550483 SEC24BO95487 1268 aa15.3■□□□□ 0.04
CACNB3-217ENST00000550483 RIC1Q4ADV7 1423 aa15.3■□□□□ 0.04
CACNB3-217ENST00000550483 USPL1Q5W0Q7 1092 aa15.3■□□□□ 0.04
CACNB3-217ENST00000550483 TPTE2Q6XPS3 522 aa15.3■□□□□ 0.04
CACNB3-217ENST00000550483 MROH5Q6ZUA9 1318 aa15.3■□□□□ 0.04
CACNB3-217ENST00000550483 CARMIL3Q8ND23 1372 aa15.3■□□□□ 0.04
CACNB3-217ENST00000550483 TUBGCP6Q96RT7 1819 aa15.3■□□□□ 0.04
CACNB3-217ENST00000550483 GTF2E1P29083 439 aaPredicted RBP15.29■□□□□ 0.04
CACNB3-217ENST00000550483 SF3B3Q15393 1217 aaKnown RBP15.29■□□□□ 0.04
CACNB3-217ENST00000550483 LDHAL6AQ6ZMR3 332 aa15.29■□□□□ 0.04
CACNB3-217ENST00000550483 RILPL2Q969X0 211 aa15.29■□□□□ 0.04
CACNB3-217ENST00000550483 CDC5LQ99459 802 aaKnown RBP15.29■□□□□ 0.04
CACNB3-217ENST00000550483 GREM2Q9H772 168 aa15.29■□□□□ 0.04
CACNB3-217ENST00000550483 BCL2L12Q9HB09 334 aa15.29■□□□□ 0.04
CACNB3-217ENST00000550483 LRRC4BQ9NT99 713 aa15.29■□□□□ 0.04
CACNB3-217ENST00000550483 IGHMBP2P38935 993 aaKnown RBP15.28■□□□□ 0.04
CACNB3-217ENST00000550483 BECN1Q14457 450 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms