RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 N4BP3O15049 544 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 CKAP4Q07065 602 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 CCDC82Q8N4S0 544 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 SEPT11Q9NVA2 429 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 ZNF518AQ6AHZ1 1483 aa18.16■□□□□ 0.5
RBFOX1-212ENST00000550418 NF2P35240 595 aa18.16■□□□□ 0.5
RBFOX1-212ENST00000550418 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
RBFOX1-212ENST00000550418 MATR3P43243 847 aaKnown RBP eCLIP18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 MAATS1Q7Z4T9 603 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 TSC1Q92574 1164 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 GAS2L3Q86XJ1 694 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 TMEM63CQ9P1W3 806 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 HSF2BPO75031 334 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 PHACTR2O75167 634 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 TDRD12Q587J7 1177 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 CCDC178Q5BJE1 867 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 ANKRD18AQ8IVF6 992 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 IFNKQ9P0W0 207 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 SLC12A7Q9Y666 1083 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 IARSP41252 1262 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 HSP90AA4PQ58FG1 418 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 KRBA2Q6ZNG9 492 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 NBPF11Q86T75 865 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 C8orf58Q8NAV2 365 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 SHANK2Q9UPX8 1470 aa18.15■□□□□ 0.5
RBFOX1-212ENST00000550418 GOLGA8AA7E2F4 631 aa18.14■□□□□ 0.5
RBFOX1-212ENST00000550418 TOM1O60784 492 aa18.14■□□□□ 0.5
RBFOX1-212ENST00000550418 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.5
RBFOX1-212ENST00000550418 CEP85Q6P2H3 762 aa18.14■□□□□ 0.5
RBFOX1-212ENST00000550418 CARD14Q9BXL6 1004 aa18.14■□□□□ 0.5
RBFOX1-212ENST00000550418 GOLGA6L10A0A0M3HER8 536 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 CABP4P57796 275 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 SSRP1Q08945 709 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 VAMP4O75379 141 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 TUBBP07437 444 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 EVCP57679 992 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 ATP8B2P98198 1209 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 TOM1L2Q6ZVM7 507 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 CTAGE9A4FU28 777 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 HSPA4P34932 840 aa18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 IKQ13123 557 aaPredicted RBP18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 DBF4Q9UBU7 674 aaPredicted RBP18.14■□□□□ 0.49
RBFOX1-212ENST00000550418 FOXO3O43524 673 aa18.13■□□□□ 0.49
RBFOX1-212ENST00000550418 CHMLP26374 656 aa18.13■□□□□ 0.49
RBFOX1-212ENST00000550418 GBP2P32456 591 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-212ENST00000550418 MPHOSPH8Q99549 860 aa18.13■□□□□ 0.49
RBFOX1-212ENST00000550418 NAPBQ9H115 298 aa18.13■□□□□ 0.49
RBFOX1-212ENST00000550418 FBXO3Q9UK99 471 aa18.13■□□□□ 0.49
RBFOX1-212ENST00000550418 SAMD1Q6SPF0 538 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-212ENST00000550418 USHBP1Q8N6Y0 703 aa18.13■□□□□ 0.49
RBFOX1-212ENST00000550418 MTIF2P46199 727 aaKnown RBP18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 ELF2Q15723 593 aa18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 A0A1B0GUL7 405 aa18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 PPP1R1BQ9UD71 204 aaPredicted RBP18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 ZBTB7BO15156 539 aaPredicted RBP18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 OPA1O60313 960 aa18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 VPS36Q86VN1 386 aa18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 CTAGE1Q96RT6 745 aa18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 LRRC2Q9BYS8 371 aa18.12■□□□□ 0.49
RBFOX1-212ENST00000550418 FGFR1OPO95684 399 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 SPECC1LQ69YQ0 1117 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 RTL1A6NKG5 1358 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 ATRIPQ8WXE1 791 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 LRP2BPQ9P2M1 347 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 PI4KAP2A4QPH2 592 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 IFIT3O14879 490 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 EZRP15311 586 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 PI4KAP1Q8N8J0 262 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 MYD88Q99836 296 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 ZMYM4Q5VZL5 1548 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 GCOM1H8Y6P7 765 aaPredicted RBP18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 MYZAPP0CAP1 466 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 GOPCQ9HD26 462 aa18.11■□□□□ 0.49
RBFOX1-212ENST00000550418 HDXQ7Z353 690 aa18.1■□□□□ 0.49
RBFOX1-212ENST00000550418 OTUD6BQ8N6M0 293 aa18.1■□□□□ 0.49
RBFOX1-212ENST00000550418 GOLIM4O00461 696 aa18.1■□□□□ 0.49
RBFOX1-212ENST00000550418 PUF60Q9UHX1 559 aaKnown RBP18.1■□□□□ 0.49
RBFOX1-212ENST00000550418 UTP14AQ9BVJ6 771 aaKnown RBP18.1■□□□□ 0.49
RBFOX1-212ENST00000550418 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.1■□□□□ 0.49
RBFOX1-212ENST00000550418 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
RBFOX1-212ENST00000550418 PPP2R3AQ06190 1150 aa18.1■□□□□ 0.49
RBFOX1-212ENST00000550418 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 SPTLC2O15270 562 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 ATP2C2O75185 946 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 ZNF75DP51815 510 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 KARSQ15046 597 aaKnown RBP18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 VGLL3A8MV65 326 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 SPAG1Q07617 926 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 METTL24Q5JXM2 366 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 Q6ZUG5 572 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 MICU3Q86XE3 530 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
RBFOX1-212ENST00000550418 TSG101Q99816 390 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms