RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 PGAP2Q9UHJ9 254 aa15.2■□□□□ 0.02
SMARCD1-208ENST00000550280 TLL2Q9Y6L7 1015 aa15.2■□□□□ 0.02
SMARCD1-208ENST00000550280 TAF1P21675 1872 aa15.2■□□□□ 0.02
SMARCD1-208ENST00000550280 BBOX1O75936 387 aa15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 RAD17O75943 681 aa15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 GRAPQ13588 217 aa15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 DPP8Q6V1X1 898 aaPredicted RBP15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 MPNDQ8N594 471 aa15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 TRPM4Q8TD43 1214 aa15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 GLIS2Q9BZE0 524 aaPredicted RBP15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 TRMT112Q9UI30 125 aaKnown RBP15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 LRRC37AA6NMS7 1700 aa15.19■□□□□ 0.02
SMARCD1-208ENST00000550280 SH3TC1Q8TE82 1336 aa15.18■□□□□ 0.02
SMARCD1-208ENST00000550280 DDX60Q8IY21 1712 aaKnown RBP15.18■□□□□ 0.02
SMARCD1-208ENST00000550280 AOC2O75106 756 aa15.18■□□□□ 0.02
SMARCD1-208ENST00000550280 RALBP1Q15311 655 aa15.18■□□□□ 0.02
SMARCD1-208ENST00000550280 NEUROD2Q15784 382 aa15.18■□□□□ 0.02
SMARCD1-208ENST00000550280 HSP90AB3PQ58FF7 597 aa15.18■□□□□ 0.02
SMARCD1-208ENST00000550280 DLK2Q6UY11 383 aa15.18■□□□□ 0.02
SMARCD1-208ENST00000550280 ISCA1Q9BUE6 129 aa15.18■□□□□ 0.02
SMARCD1-208ENST00000550280 MAP2K1Q02750 393 aaPredicted RBP15.17■□□□□ 0.02
SMARCD1-208ENST00000550280 CIAPIN1Q6FI81 312 aa15.17■□□□□ 0.02
SMARCD1-208ENST00000550280 SAPCD2Q86UD0 394 aa15.17■□□□□ 0.02
SMARCD1-208ENST00000550280 SUPT20HQ8NEM7 779 aa15.17■□□□□ 0.02
SMARCD1-208ENST00000550280 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
SMARCD1-208ENST00000550280 GPR101Q96P66 508 aaPredicted RBP15.17■□□□□ 0.02
SMARCD1-208ENST00000550280 TRPM7Q96QT4 1865 aa15.16■□□□□ 0.02
SMARCD1-208ENST00000550280 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
SMARCD1-208ENST00000550280 GRM1Q13255 1194 aa15.16■□□□□ 0.02
SMARCD1-208ENST00000550280 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
SMARCD1-208ENST00000550280 FAM89AQ96GI7 184 aa15.16■□□□□ 0.02
SMARCD1-208ENST00000550280 ABHD8Q96I13 439 aa15.16■□□□□ 0.02
SMARCD1-208ENST00000550280 TSKSQ9UJT2 592 aa15.16■□□□□ 0.02
SMARCD1-208ENST00000550280 ATP5J2-PTCD1G3V325 749 aa15.15■□□□□ 0.02
SMARCD1-208ENST00000550280 CELF2O95319 508 aaKnown RBP15.15■□□□□ 0.02
SMARCD1-208ENST00000550280 EGFRP00533 1210 aa15.15■□□□□ 0.02
SMARCD1-208ENST00000550280 PLBD2Q8NHP8 589 aa15.15■□□□□ 0.02
SMARCD1-208ENST00000550280 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
SMARCD1-208ENST00000550280 MYBBP1AQ9BQG0 1328 aaKnown RBP15.15■□□□□ 0.02
SMARCD1-208ENST00000550280 CDHR2Q9BYE9 1310 aa15.15■□□□□ 0.02
SMARCD1-208ENST00000550280 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
SMARCD1-208ENST00000550280 HDGFL1Q5TGJ6 251 aa15.14■□□□□ 0.01
SMARCD1-208ENST00000550280 PAXIP1Q6ZW49 1069 aaPredicted RBP15.14■□□□□ 0.01
SMARCD1-208ENST00000550280 ZIC5Q96T25 663 aa15.14■□□□□ 0.01
SMARCD1-208ENST00000550280 KCNQ5Q9NR82 932 aa15.14■□□□□ 0.01
SMARCD1-208ENST00000550280 POLLQ9UGP5 575 aa15.14■□□□□ 0.01
SMARCD1-208ENST00000550280 ADAMTS8Q9UP79 889 aa15.14■□□□□ 0.01
SMARCD1-208ENST00000550280 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
SMARCD1-208ENST00000550280 RTL9Q8NET4 1388 aa15.13■□□□□ 0.01
SMARCD1-208ENST00000550280 PSMD14O00487 310 aa15.13■□□□□ 0.01
SMARCD1-208ENST00000550280 ECE1P42892 770 aa15.13■□□□□ 0.01
SMARCD1-208ENST00000550280 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
SMARCD1-208ENST00000550280 RUNDC1Q96C34 613 aa15.13■□□□□ 0.01
SMARCD1-208ENST00000550280 TMX4Q9H1E5 349 aaPredicted RBP15.13■□□□□ 0.01
SMARCD1-208ENST00000550280 DBNDD1Q9H9R9 158 aa15.13■□□□□ 0.01
SMARCD1-208ENST00000550280 CNOT7Q9UIV1 285 aaKnown RBP15.13■□□□□ 0.01
SMARCD1-208ENST00000550280 HOXB7P09629 217 aa15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 GPSM2P81274 684 aa15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 TNIP1Q15025 636 aa15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 SAMD7Q7Z3H4 446 aa15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 MICALL2Q8IY33 904 aa15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 ZC3H15Q8WU90 426 aaKnown RBP15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 BCL2L13Q9BXK5 485 aa15.12■□□□□ 0.01
SMARCD1-208ENST00000550280 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
SMARCD1-208ENST00000550280 MAP2K2P36507 400 aa15.11■□□□□ 0.01
SMARCD1-208ENST00000550280 DUSP27Q5VZP5 1158 aa15.11■□□□□ 0.01
SMARCD1-208ENST00000550280 TMC4Q7Z404 712 aa15.11■□□□□ 0.01
SMARCD1-208ENST00000550280 HHIPL1Q96JK4 782 aa15.11■□□□□ 0.01
SMARCD1-208ENST00000550280 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
SMARCD1-208ENST00000550280 MBIPQ9NS73 344 aa15.11■□□□□ 0.01
SMARCD1-208ENST00000550280 DBF4Q9UBU7 674 aaPredicted RBP15.11■□□□□ 0.01
SMARCD1-208ENST00000550280 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 TRIM28Q13263 835 aaKnown RBP15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 CDC37L1Q7L3B6 337 aa15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 USP48Q86UV5 1035 aa15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 DPF2Q92785 391 aa15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 CFAP44Q96MT7 982 aa15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 PHAXQ9H814 394 aaKnown RBP15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 SEC31BQ9NQW1 1179 aa15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
SMARCD1-208ENST00000550280 IRS4O14654 1257 aaPredicted RBP15.09■□□□□ 0.01
SMARCD1-208ENST00000550280 DOK7Q18PE1 504 aa15.09■□□□□ 0.01
SMARCD1-208ENST00000550280 WASHC4Q2M389 1173 aa15.09■□□□□ 0.01
SMARCD1-208ENST00000550280 TBC1D10BQ4KMP7 808 aaPredicted RBP15.09■□□□□ 0.01
SMARCD1-208ENST00000550280 TBC1D16Q8TBP0 767 aa15.09■□□□□ 0.01
SMARCD1-208ENST00000550280 SCN9AQ15858 1988 aa15.08■□□□□ 0
SMARCD1-208ENST00000550280 ECE2O60344 883 aa15.08■□□□□ 0
SMARCD1-208ENST00000550280 HYPKQ9NX55 129 aa15.08■□□□□ 0
SMARCD1-208ENST00000550280 ASTN2O75129 1339 aaPredicted RBP15.08■□□□□ 0
SMARCD1-208ENST00000550280 FAM155AB1AL88 458 aaPredicted RBP15.07■□□□□ 0
SMARCD1-208ENST00000550280 ADM5C9JUS6 153 aa15.07■□□□□ 0
SMARCD1-208ENST00000550280 C6orf229H3BNL8 230 aa15.07■□□□□ 0
SMARCD1-208ENST00000550280 H7C1D1 291 aa15.07■□□□□ 0
SMARCD1-208ENST00000550280 BRPF1P55201 1214 aaPredicted RBP15.07■□□□□ 0
SMARCD1-208ENST00000550280 FAM161AQ3B820 660 aa15.07■□□□□ 0
SMARCD1-208ENST00000550280 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
SMARCD1-208ENST00000550280 RPS8P62241 208 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms