RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 C8orf58Q8NAV2 365 aa14.01□□□□□ -0.17
VTI1BP3-201ENST00000550220 STK31Q9BXU1 1019 aa14.01□□□□□ -0.17
VTI1BP3-201ENST00000550220 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
VTI1BP3-201ENST00000550220 GJA3Q9Y6H8 435 aa14.01□□□□□ -0.17
VTI1BP3-201ENST00000550220 KIAA2012Q0VF49 1180 aa14□□□□□ -0.17
VTI1BP3-201ENST00000550220 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
VTI1BP3-201ENST00000550220 PHAXQ9H814 394 aaKnown RBP14□□□□□ -0.17
VTI1BP3-201ENST00000550220 PASKQ96RG2 1323 aa13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 TNIP1Q15025 636 aa13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 AOC3Q16853 763 aa13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 USP50Q70EL3 339 aaPredicted RBP13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 CNTROBQ8N137 903 aa13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 METTL22Q9BUU2 404 aaPredicted RBP13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
VTI1BP3-201ENST00000550220 ITGBL1O95965 494 aaPredicted RBP13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 PCCAP05165 728 aaPredicted RBP13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 RPS8P62241 208 aaKnown RBP13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 NEXNQ0ZGT2 675 aa13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 CCDC184Q52MB2 194 aa13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 IFFO2Q5TF58 517 aa13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 KSR2Q6VAB6 950 aa13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 MYD88Q99836 296 aa13.98□□□□□ -0.17
VTI1BP3-201ENST00000550220 SCN4AP35499 1836 aa13.97□□□□□ -0.17
VTI1BP3-201ENST00000550220 TMEM88BA6NKF7 163 aa13.97□□□□□ -0.17
VTI1BP3-201ENST00000550220 PDE8AO60658 829 aa13.97□□□□□ -0.17
VTI1BP3-201ENST00000550220 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
VTI1BP3-201ENST00000550220 CCDC152Q4G0S7 254 aa13.97□□□□□ -0.17
VTI1BP3-201ENST00000550220 CIAPIN1Q6FI81 312 aa13.97□□□□□ -0.17
VTI1BP3-201ENST00000550220 EYA3Q99504 573 aa13.97□□□□□ -0.17
VTI1BP3-201ENST00000550220 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
VTI1BP3-201ENST00000550220 CDHR2Q9BYE9 1310 aa13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 CACNA1SQ13698 1873 aa13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 SCNN1DP51172 638 aa13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 CXCL9Q07325 125 aa13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 WASHC4Q2M389 1173 aa13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 TSPYL6Q8N831 410 aa13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 CELF1Q92879 486 aaKnown RBP13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 GPRC5DQ9NZD1 345 aa13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 MAP3K2Q9Y2U5 619 aa13.96□□□□□ -0.17
VTI1BP3-201ENST00000550220 EPS15P42566 896 aa13.95□□□□□ -0.18
VTI1BP3-201ENST00000550220 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
VTI1BP3-201ENST00000550220 BCL2L13Q9BXK5 485 aa13.95□□□□□ -0.18
VTI1BP3-201ENST00000550220 PI4KAP2A4QPH2 592 aa13.94□□□□□ -0.18
VTI1BP3-201ENST00000550220 C6orf229H3BNL8 230 aa13.94□□□□□ -0.18
VTI1BP3-201ENST00000550220 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
VTI1BP3-201ENST00000550220 MAP1SQ66K74 1059 aaPredicted RBP13.94□□□□□ -0.18
VTI1BP3-201ENST00000550220 PI4KAP1Q8N8J0 262 aa13.94□□□□□ -0.18
VTI1BP3-201ENST00000550220 ZNF428Q96B54 188 aa13.94□□□□□ -0.18
VTI1BP3-201ENST00000550220 PODXL2Q9NZ53 605 aa13.94□□□□□ -0.18
VTI1BP3-201ENST00000550220 H7C1D1 291 aa13.93□□□□□ -0.18
VTI1BP3-201ENST00000550220 ZC3H15Q8WU90 426 aaKnown RBP13.93□□□□□ -0.18
VTI1BP3-201ENST00000550220 CDC5LQ99459 802 aaKnown RBP13.93□□□□□ -0.18
VTI1BP3-201ENST00000550220 ZC3H12CQ9C0D7 883 aaKnown RBP13.93□□□□□ -0.18
VTI1BP3-201ENST00000550220 ANKRD36CQ5JPF3 1778 aa13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 GMPSP49915 693 aaPredicted RBP13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 GPSM2P81274 684 aa13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 ANKRD18AQ8IVF6 992 aa13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 DPF2Q92785 391 aa13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 MYH16Q9H6N6 1097 aa13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 ANKIB1Q9P2G1 1089 aa13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 MKRN1Q9UHC7 482 aaKnown RBP13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 CNTNAP1P78357 1384 aa13.92□□□□□ -0.18
VTI1BP3-201ENST00000550220 G3V3G9 751 aa13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 RAD17O75943 681 aa13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 RPS12P25398 132 aaKnown RBP13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 TBC1D16Q8TBP0 767 aa13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 POLLQ9UGP5 575 aa13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 PGAP2Q9UHJ9 254 aa13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 CNOT7Q9UIV1 285 aaKnown RBP13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 GGA1Q9UJY5 639 aa13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 COL4A5P29400 1685 aa13.91□□□□□ -0.18
VTI1BP3-201ENST00000550220 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 RASSF10A6NK89 507 aa13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 VAMP4O75379 141 aa13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 IGKV5-2P06315 115 aa13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 HSPA1AP0DMV8 641 aaKnown RBP13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 HSPA1BP0DMV9 641 aaKnown RBP13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 CTSWP56202 376 aa13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 FLIIQ13045 1269 aa13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 SEC31BQ9NQW1 1179 aa13.9□□□□□ -0.18
VTI1BP3-201ENST00000550220 YDJCA8MPS7 323 aa13.89□□□□□ -0.19
VTI1BP3-201ENST00000550220 NEURL1BA8MQ27 555 aa13.89□□□□□ -0.19
VTI1BP3-201ENST00000550220 H7C1W4 665 aa13.89□□□□□ -0.19
VTI1BP3-201ENST00000550220 RIMBP2O15034 1052 aa13.89□□□□□ -0.19
VTI1BP3-201ENST00000550220 ATP2B4P23634 1241 aa13.89□□□□□ -0.19
VTI1BP3-201ENST00000550220 FKBP5Q13451 457 aaPredicted RBP13.89□□□□□ -0.19
VTI1BP3-201ENST00000550220 ABT1Q9ULW3 272 aaKnown RBP13.89□□□□□ -0.19
VTI1BP3-201ENST00000550220 XDHP47989 1333 aa13.89□□□□□ -0.19
VTI1BP3-201ENST00000550220 ECE2O60344 883 aa13.88□□□□□ -0.19
VTI1BP3-201ENST00000550220 UFL1O94874 794 aa13.88□□□□□ -0.19
VTI1BP3-201ENST00000550220 ECE1P42892 770 aa13.88□□□□□ -0.19
VTI1BP3-201ENST00000550220 CDC37L1Q7L3B6 337 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms