RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 IL25Q9H293 177 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 DBNLQ9UJU6 430 aaKnown RBP10.68□□□□□ -0.7
TMEM116-209ENST00000550020 GLI3P10071 1580 aa10.68□□□□□ -0.7
TMEM116-209ENST00000550020 STRCQ7RTU9 1775 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 ABCA3Q99758 1704 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 PALLDQ8WX93 1383 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 ABCC12Q96J65 1359 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 RPAP1Q9BWH6 1393 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-209ENST00000550020 SH3TC1Q8TE82 1336 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 STX6O43752 255 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 A1BGP04217 495 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 ZFYP08048 801 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-209ENST00000550020 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
TMEM116-209ENST00000550020 NASPP49321 788 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-209ENST00000550020 PKP1Q13835 747 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 CCDC158Q5M9N0 1113 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 USPL1Q5W0Q7 1092 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 CAVIN1Q6NZI2 390 aaKnown RBP10.67□□□□□ -0.7
TMEM116-209ENST00000550020 KBTBD3Q8NAB2 608 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 FAM227BQ96M60 508 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 PLA2G12BQ9BX93 195 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 TLR7Q9NYK1 1049 aaKnown RBP10.67□□□□□ -0.7
TMEM116-209ENST00000550020 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 KIF3AQ9Y496 699 aa10.67□□□□□ -0.7
TMEM116-209ENST00000550020 LRP6O75581 1613 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 CDHR2Q9BYE9 1310 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 AFDNP55196 1824 aaKnown RBP10.66□□□□□ -0.7
TMEM116-209ENST00000550020 TAF5LO75529 589 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 RPS6KB1P23443 525 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 TAF7LQ5H9L4 462 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 TTLL7Q6ZT98 887 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 KLHDC4Q8TBB5 520 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 NEUROD6Q96NK8 337 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 DNAJC2Q99543 621 aaKnown RBP10.66□□□□□ -0.7
TMEM116-209ENST00000550020 ZBTB3Q9H5J0 574 aa10.66□□□□□ -0.7
TMEM116-209ENST00000550020 COL14A1Q05707 1796 aaKnown RBP10.65□□□□□ -0.7
TMEM116-209ENST00000550020 A0A0D9SFI3 127 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 EXOC5O00471 708 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 PIP4K2AP48426 406 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-209ENST00000550020 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 ZBTB38Q8NAP3 1195 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-209ENST00000550020 AK7Q96M32 723 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 ARXQ96QS3 562 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 DBNDD2Q9BQY9 259 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 DSCC1Q9BVC3 393 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 PAG1Q9NWQ8 432 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 BTG4Q9NY30 223 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 CTNNA3Q9UI47 895 aa10.65□□□□□ -0.7
TMEM116-209ENST00000550020 MAP3K15Q6ZN16 1313 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 F13A1P00488 732 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 SYT1P21579 422 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 UBE2HP62256 183 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 IFIT5Q13325 482 aaKnown RBP10.64□□□□□ -0.71
TMEM116-209ENST00000550020 ZSCAN25Q6NSZ9 544 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 LRSAM1Q6UWE0 723 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 GIGYF2Q6Y7W6 1299 aaKnown RBP10.64□□□□□ -0.71
TMEM116-209ENST00000550020 ATG9AQ7Z3C6 839 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 FAM184AQ8NB25 1140 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 NEK1Q96PY6 1258 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 THRAP3Q9Y2W1 955 aaKnown RBP10.64□□□□□ -0.71
TMEM116-209ENST00000550020 NUP188Q5SRE5 1749 aa10.64□□□□□ -0.71
TMEM116-209ENST00000550020 SPEF2Q9C093 1822 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 KDM4FA0A1W2PPD8 638 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 ERVV-1B6SEH8 477 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 IFIT1P09914 478 aaKnown RBP10.63□□□□□ -0.71
TMEM116-209ENST00000550020 GJB2P29033 226 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 FGD1P98174 961 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 ADCK5Q3MIX3 580 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 HS1BP3Q53T59 392 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 TTC39AQ5SRH9 613 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 GPT2Q8TD30 523 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 PIGBQ92521 554 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 JARID2Q92833 1246 aaPredicted RBP10.63□□□□□ -0.71
TMEM116-209ENST00000550020 PPP1R9BQ96SB3 815 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 LLPHQ9BRT6 129 aaKnown RBP10.63□□□□□ -0.71
TMEM116-209ENST00000550020 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.711e-6■□□□□ 8.8
TMEM116-209ENST00000550020 DISP2A7MBM2 1401 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 ZNF609O15014 1411 aa10.63□□□□□ -0.71
TMEM116-209ENST00000550020 BCL9O00512 1426 aa10.62□□□□□ -0.71
TMEM116-209ENST00000550020 A0A1B0GUL7 405 aa10.62□□□□□ -0.71
TMEM116-209ENST00000550020 RNF113AO15541 343 aaKnown RBP10.62□□□□□ -0.71
TMEM116-209ENST00000550020 CSF1RP07333 972 aa10.62□□□□□ -0.71
TMEM116-209ENST00000550020 TTF1Q15361 905 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-209ENST00000550020 FOXD4L5Q5VV16 416 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-209ENST00000550020 LARP1BQ659C4 914 aaKnown RBP10.62□□□□□ -0.71
TMEM116-209ENST00000550020 GAS2L3Q86XJ1 694 aa10.62□□□□□ -0.71
TMEM116-209ENST00000550020 DNAJC10Q8IXB1 793 aa10.62□□□□□ -0.71
TMEM116-209ENST00000550020 FOXD4L4Q8WXT5 416 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-209ENST00000550020 TSPY26PQ9H489 355 aa10.62□□□□□ -0.71
TMEM116-209ENST00000550020 PLCH1Q4KWH8 1693 aa10.61□□□□□ -0.71
TMEM116-209ENST00000550020 ANKRD18BA2A2Z9 1011 aa10.61□□□□□ -0.71
TMEM116-209ENST00000550020 GOLIM4O00461 696 aa10.61□□□□□ -0.71
TMEM116-209ENST00000550020 IL6STP40189 918 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-209ENST00000550020 KRT85P78386 507 aa10.61□□□□□ -0.71
TMEM116-209ENST00000550020 ME3Q16798 604 aa10.61□□□□□ -0.71
TMEM116-209ENST00000550020 ZMYM1Q5SVZ6 1142 aa10.61□□□□□ -0.71
TMEM116-209ENST00000550020 CCDC183Q5T5S1 534 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms