RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CCDC152Q4G0S7 254 aa24.48■■□□□ 1.51
DDX54-207ENST00000550016 FRAT1Q92837 279 aaPredicted RBP24.48■■□□□ 1.51
DDX54-207ENST00000550016 PLA2G12BQ9BX93 195 aa24.48■■□□□ 1.51
DDX54-207ENST00000550016 BBOX1O75936 387 aa24.47■■□□□ 1.51
DDX54-207ENST00000550016 CCT4P50991 539 aaKnown RBP24.47■■□□□ 1.51
DDX54-207ENST00000550016 CTSWP56202 376 aa24.47■■□□□ 1.51
DDX54-207ENST00000550016 PPEF1O14829 653 aaPredicted RBP24.46■■□□□ 1.51
DDX54-207ENST00000550016 GRAPQ13588 217 aa24.46■■□□□ 1.51
DDX54-207ENST00000550016 GRAPLQ8TC17 118 aaPredicted RBP24.46■■□□□ 1.51
DDX54-207ENST00000550016 CCDC93Q567U6 631 aa24.45■■□□□ 1.5
DDX54-207ENST00000550016 CC2D2BQ6DHV5 1058 aa24.45■■□□□ 1.5
DDX54-207ENST00000550016 ATF7IPQ6VMQ6 1270 aa24.45■■□□□ 1.5
DDX54-207ENST00000550016 TTLL11Q8NHH1 800 aa24.45■■□□□ 1.5
DDX54-207ENST00000550016 UTYO14607 1347 aa24.44■■□□□ 1.5
DDX54-207ENST00000550016 DICER1Q9UPY3 1922 aaKnown RBP24.44■■□□□ 1.5
DDX54-207ENST00000550016 TRIM27P14373 513 aa24.43■■□□□ 1.5
DDX54-207ENST00000550016 ZKSCAN2Q63HK3 967 aa24.43■■□□□ 1.5
DDX54-207ENST00000550016 OLFM4Q6UX06 510 aa24.43■■□□□ 1.5
DDX54-207ENST00000550016 TMC4Q7Z404 712 aa24.43■■□□□ 1.5
DDX54-207ENST00000550016 RTKN2Q8IZC4 609 aa24.43■■□□□ 1.5
DDX54-207ENST00000550016 CCDC85AQ96PX6 553 aaPredicted RBP24.43■■□□□ 1.5
DDX54-207ENST00000550016 ATP6V0A2Q9Y487 856 aa24.43■■□□□ 1.5
DDX54-207ENST00000550016 UTRNP46939 3433 aa24.43■■□□□ 1.5
DDX54-207ENST00000550016 SPEF2Q9C093 1822 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 NFKBIEO00221 500 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 CSF1RP07333 972 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 RPS8P62241 208 aaKnown RBP24.42■■□□□ 1.5
DDX54-207ENST00000550016 GRIPAP1Q4V328 841 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 SP8Q8IXZ3 490 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 CELF1Q92879 486 aaKnown RBP24.42■■□□□ 1.5
DDX54-207ENST00000550016 USP44Q9H0E7 712 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 TMX4Q9H1E5 349 aaPredicted RBP24.42■■□□□ 1.5
DDX54-207ENST00000550016 SEC31BQ9NQW1 1179 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 RCAN3Q9UKA8 241 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 RTL9Q8NET4 1388 aa24.42■■□□□ 1.5
DDX54-207ENST00000550016 LTBP3Q9NS15 1303 aa24.41■■□□□ 1.5
DDX54-207ENST00000550016 NBPF7P0C2Y1 421 aaPredicted RBP24.41■■□□□ 1.5
DDX54-207ENST00000550016 YY1P25490 414 aa24.41■■□□□ 1.5
DDX54-207ENST00000550016 FOXO4P98177 505 aa24.41■■□□□ 1.5
DDX54-207ENST00000550016 RASSF7Q02833 373 aa24.41■■□□□ 1.5
DDX54-207ENST00000550016 INTS3Q68E01 1043 aaKnown RBP24.41■■□□□ 1.5
DDX54-207ENST00000550016 COL4A1P02462 1669 aa24.4■■□□□ 1.5
DDX54-207ENST00000550016 GREM2Q9H772 168 aa24.4■■□□□ 1.5
DDX54-207ENST00000550016 LRRC37AA6NMS7 1700 aa24.4■■□□□ 1.5
DDX54-207ENST00000550016 TAOK3Q9H2K8 898 aa24.39■■□□□ 1.49
DDX54-207ENST00000550016 TNNQ9UQP3 1299 aa24.39■■□□□ 1.49
DDX54-207ENST00000550016 LMNB1P20700 586 aa24.38■■□□□ 1.49
DDX54-207ENST00000550016 FKBP4Q02790 459 aaKnown RBP eCLIP24.38■■□□□ 1.49
DDX54-207ENST00000550016 EPHA10Q5JZY3 1008 aa24.38■■□□□ 1.49
DDX54-207ENST00000550016 C9orf131Q5VYM1 1079 aa24.38■■□□□ 1.49
DDX54-207ENST00000550016 CLUAP1Q96AJ1 413 aa24.38■■□□□ 1.49
DDX54-207ENST00000550016 SUCLG2Q96I99 432 aa24.38■■□□□ 1.49
DDX54-207ENST00000550016 CDC5LQ99459 802 aaKnown RBP24.38■■□□□ 1.49
DDX54-207ENST00000550016 SNED1Q8TER0 1413 aa24.37■■□□□ 1.49
DDX54-207ENST00000550016 ANKRD18AQ8IVF6 992 aa24.37■■□□□ 1.49
DDX54-207ENST00000550016 RNF181Q9P0P0 153 aa24.37■■□□□ 1.49
DDX54-207ENST00000550016 PRELPP51888 382 aa24.36■■□□□ 1.49
DDX54-207ENST00000550016 LMBR1LQ6UX01 489 aa24.36■■□□□ 1.49
DDX54-207ENST00000550016 SLC51AQ86UW1 340 aa24.36■■□□□ 1.49
DDX54-207ENST00000550016 KAZALD1Q96I82 304 aa24.36■■□□□ 1.49
DDX54-207ENST00000550016 PSMD1Q99460 953 aa24.36■■□□□ 1.49
DDX54-207ENST00000550016 ITGA6P23229 1130 aa24.35■■□□□ 1.49
DDX54-207ENST00000550016 FAM161AQ3B820 660 aa24.35■■□□□ 1.49
DDX54-207ENST00000550016 DZIP1LQ8IYY4 767 aaKnown RBP24.34■■□□□ 1.49
DDX54-207ENST00000550016 MPNDQ8N594 471 aa24.34■■□□□ 1.49
DDX54-207ENST00000550016 CHMP3Q9Y3E7 222 aa24.34■■□□□ 1.49
DDX54-207ENST00000550016 ANKRD18BA2A2Z9 1011 aa24.33■■□□□ 1.49
DDX54-207ENST00000550016 UBTFL1P0CB47 393 aaPredicted RBP24.33■■□□□ 1.49
DDX54-207ENST00000550016 IFIT5Q13325 482 aaKnown RBP24.33■■□□□ 1.49
DDX54-207ENST00000550016 FTSJ3Q8IY81 847 aaKnown RBP24.33■■□□□ 1.49
DDX54-207ENST00000550016 BICC1Q9H694 974 aaKnown RBP24.33■■□□□ 1.49
DDX54-207ENST00000550016 HDAC5Q9UQL6 1122 aa24.33■■□□□ 1.49
DDX54-207ENST00000550016 TIAM2Q8IVF5 1701 aa24.32■■□□□ 1.48
DDX54-207ENST00000550016 DPP8Q6V1X1 898 aaPredicted RBP24.32■■□□□ 1.48
DDX54-207ENST00000550016 TMEM57Q8N5G2 664 aa24.32■■□□□ 1.48
DDX54-207ENST00000550016 ZNF277Q9NRM2 450 aaPredicted RBP24.32■■□□□ 1.48
DDX54-207ENST00000550016 BSDC1Q9NW68 430 aaPredicted RBP24.32■■□□□ 1.48
DDX54-207ENST00000550016 IGHMBP2P38935 993 aaKnown RBP24.31■■□□□ 1.48
DDX54-207ENST00000550016 CCDC57Q2TAC2 916 aa24.31■■□□□ 1.48
DDX54-207ENST00000550016 RABL6Q3YEC7 729 aaPredicted RBP24.31■■□□□ 1.48
DDX54-207ENST00000550016 MEIS3Q99687 375 aa24.31■■□□□ 1.48
DDX54-207ENST00000550016 RTFDC1Q9BY42 306 aaPredicted RBP24.31■■□□□ 1.48
DDX54-207ENST00000550016 GNAI3P08754 354 aa24.3■■□□□ 1.48
DDX54-207ENST00000550016 MS4A1P11836 297 aa24.3■■□□□ 1.48
DDX54-207ENST00000550016 ANKRD44Q8N8A2 993 aa24.3■■□□□ 1.48
DDX54-207ENST00000550016 SUPT20HQ8NEM7 779 aa24.3■■□□□ 1.48
DDX54-207ENST00000550016 LTBP1Q14766 1721 aa24.3■■□□□ 1.48
DDX54-207ENST00000550016 RLBP1P12271 317 aa24.29■■□□□ 1.48
DDX54-207ENST00000550016 IARSP41252 1262 aaKnown RBP24.29■■□□□ 1.48
DDX54-207ENST00000550016 GPSM2P81274 684 aa24.29■■□□□ 1.48
DDX54-207ENST00000550016 MPHOSPH8Q99549 860 aa24.29■■□□□ 1.48
DDX54-207ENST00000550016 NSFL1CQ9UNZ2 370 aaKnown RBP24.29■■□□□ 1.48
DDX54-207ENST00000550016 VPS33BQ9H267 617 aa24.28■■□□□ 1.48
DDX54-207ENST00000550016 ZC3H4Q9UPT8 1303 aaKnown RBP24.28■■□□□ 1.48
DDX54-207ENST00000550016 PODXL2Q9NZ53 605 aa24.27■■□□□ 1.48
DDX54-207ENST00000550016 ANKIB1Q9P2G1 1089 aa24.27■■□□□ 1.48
DDX54-207ENST00000550016 MINPP1Q9UNW1 487 aa24.27■■□□□ 1.48
DDX54-207ENST00000550016 DUOX1Q9NRD9 1551 aa24.26■■□□□ 1.47
DDX54-207ENST00000550016 PLIN1O60240 522 aa24.26■■□□□ 1.47
DDX54-207ENST00000550016 TAF7LQ5H9L4 462 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms