RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 TRIM5Q9C035 493 aa15.09■□□□□ 0.01
CALCOCO1-217ENST00000549935 LRMPQ12912 555 aa15.08■□□□□ 0.01
CALCOCO1-217ENST00000549935 LMOD2Q6P5Q4 547 aa15.08■□□□□ 0.01
CALCOCO1-217ENST00000549935 NECAB1Q8N987 351 aa15.08■□□□□ 0.01
CALCOCO1-217ENST00000549935 DDX54Q8TDD1 881 aaKnown RBP15.08■□□□□ 0.01
CALCOCO1-217ENST00000549935 LEO1Q8WVC0 666 aaPredicted RBP15.08■□□□□ 0.01
CALCOCO1-217ENST00000549935 KCND1Q9NSA2 647 aa15.08■□□□□ 0.01
CALCOCO1-217ENST00000549935 RBM8AQ9Y5S9 174 aaKnown RBP15.08■□□□□ 0.01
CALCOCO1-217ENST00000549935 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
CALCOCO1-217ENST00000549935 GCP02774 474 aa15.08■□□□□ 0
CALCOCO1-217ENST00000549935 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0
CALCOCO1-217ENST00000549935 CAMK4Q16566 473 aa15.08■□□□□ 0
CALCOCO1-217ENST00000549935 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0
CALCOCO1-217ENST00000549935 SPATA32Q96LK8 384 aa15.08■□□□□ 0
CALCOCO1-217ENST00000549935 C16orf45Q96MC5 204 aaPredicted RBP15.08■□□□□ 0
CALCOCO1-217ENST00000549935 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.08■□□□□ 0
CALCOCO1-217ENST00000549935 ZNF165P49910 485 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 DRC7Q8IY82 874 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 CACTINQ8WUQ7 758 aaKnown RBP15.07■□□□□ 0
CALCOCO1-217ENST00000549935 MRFAP1L1Q96HT8 127 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 SUCLG2Q96I99 432 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 PODXL2Q9NZ53 605 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 NRBP1Q9UHY1 535 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 NCAPD2Q15021 1401 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 JCADQ9P266 1359 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 ANKRD24Q8TF21 1146 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 FAM227BQ96M60 508 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 BICC1Q9H694 974 aaKnown RBP15.07■□□□□ 0
CALCOCO1-217ENST00000549935 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 HDAC5Q9UQL6 1122 aa15.07■□□□□ 0
CALCOCO1-217ENST00000549935 GRM8O00222 908 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 SLC27A2O14975 620 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 KCNJ4P48050 445 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 FAM193AP78312 1265 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 RNF20Q5VTR2 975 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 ARHGEF25Q86VW2 580 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 CKAP2LQ8IYA6 745 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 LINS1Q8NG48 757 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 KIF18AQ8NI77 898 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 FAM53CQ9NYF3 392 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 PHRF1Q9P1Y6 1649 aaKnown RBP15.06■□□□□ 0
CALCOCO1-217ENST00000549935 HEG1Q9ULI3 1381 aa15.06■□□□□ 0
CALCOCO1-217ENST00000549935 SASH1O94885 1247 aa15.05■□□□□ 0
CALCOCO1-217ENST00000549935 TPD52L1Q16890 204 aaPredicted RBP15.05■□□□□ 0
CALCOCO1-217ENST00000549935 CEP135Q66GS9 1140 aa15.05■□□□□ 0
CALCOCO1-217ENST00000549935 NYAP1Q6ZVC0 841 aa15.05■□□□□ 0
CALCOCO1-217ENST00000549935 ANKLE2Q86XL3 938 aa15.05■□□□□ 0
CALCOCO1-217ENST00000549935 KAZALD1Q96I82 304 aa15.05■□□□□ 0
CALCOCO1-217ENST00000549935 CCDC8Q9H0W5 538 aaPredicted RBP15.05■□□□□ 0
CALCOCO1-217ENST00000549935 SIL1Q9H173 461 aa15.05■□□□□ 0
CALCOCO1-217ENST00000549935 HMG20BQ9P0W2 317 aa15.05■□□□□ 0
CALCOCO1-217ENST00000549935 RPS6KB1P23443 525 aa15.05■□□□□ -0
CALCOCO1-217ENST00000549935 G3BP1Q13283 466 aaKnown RBP eCLIP15.05■□□□□ -0
CALCOCO1-217ENST00000549935 SLFNL1Q499Z3 407 aa15.05■□□□□ -0
CALCOCO1-217ENST00000549935 BLOC1S2Q6QNY1 142 aa15.05■□□□□ -0
CALCOCO1-217ENST00000549935 FERMT3Q86UX7 667 aa15.05■□□□□ -0
CALCOCO1-217ENST00000549935 LRRC8AQ8IWT6 810 aa15.05■□□□□ -0
CALCOCO1-217ENST00000549935 EAF2Q96CJ1 260 aaPredicted RBP15.05■□□□□ -0
CALCOCO1-217ENST00000549935 ORAI2Q96SN7 254 aa15.05■□□□□ -0
CALCOCO1-217ENST00000549935 TLR7Q9NYK1 1049 aaKnown RBP15.05■□□□□ -0
CALCOCO1-217ENST00000549935 NPHP4O75161 1426 aaPredicted RBP15.04■□□□□ -0
CALCOCO1-217ENST00000549935 CTAGE5O15320 804 aa15.04■□□□□ -0
CALCOCO1-217ENST00000549935 NMIQ13287 307 aaPredicted RBP15.04■□□□□ -0
CALCOCO1-217ENST00000549935 IQCB1Q15051 598 aa15.04■□□□□ -0
CALCOCO1-217ENST00000549935 PGBD1Q96JS3 809 aa15.04■□□□□ -0
CALCOCO1-217ENST00000549935 OVOS2A0A0G2JMS6 1433 aa15.04■□□□□ -0
CALCOCO1-217ENST00000549935 NR1I2O75469 434 aa15.04■□□□□ -0
CALCOCO1-217ENST00000549935 DDX58O95786 925 aaKnown RBP15.04■□□□□ -0
CALCOCO1-217ENST00000549935 SLFN14P0C7P3 912 aa15.04■□□□□ -0
CALCOCO1-217ENST00000549935 TOB2Q14106 344 aaPredicted RBP15.04■□□□□ -0
CALCOCO1-217ENST00000549935 FAM173BQ6P4H8 233 aa15.04■□□□□ -0
CALCOCO1-217ENST00000549935 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
CALCOCO1-217ENST00000549935 ZNF397Q8NF99 534 aaPredicted RBP15.04■□□□□ -0
CALCOCO1-217ENST00000549935 AXIN2Q9Y2T1 843 aa15.04■□□□□ -0
CALCOCO1-217ENST00000549935 CCDC144BQ3MJ40 725 aa15.03■□□□□ -0
CALCOCO1-217ENST00000549935 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
CALCOCO1-217ENST00000549935 KLHDC4Q8TBB5 520 aa15.03■□□□□ -0
CALCOCO1-217ENST00000549935 DNAJC25Q9H1X3 360 aa15.03■□□□□ -0
CALCOCO1-217ENST00000549935 ZSCAN16Q9H4T2 348 aaPredicted RBP15.03■□□□□ -0
CALCOCO1-217ENST00000549935 DDX21Q9NR30 783 aaKnown RBP eCLIP15.03■□□□□ -0
CALCOCO1-217ENST00000549935 CHMP3Q9Y3E7 222 aa15.03■□□□□ -0
CALCOCO1-217ENST00000549935 MED23Q9ULK4 1368 aa15.03■□□□□ -0
CALCOCO1-217ENST00000549935 COL9A3Q14050 684 aaPredicted RBP15.02■□□□□ -0
CALCOCO1-217ENST00000549935 CREBRFQ8IUR6 639 aa15.02■□□□□ -0
CALCOCO1-217ENST00000549935 BOLA2Q9H3K6 86 aa15.02■□□□□ -0
CALCOCO1-217ENST00000549935 A0A0D9SFI3 127 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 KIF2AO00139 706 aaPredicted RBP15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 RESTQ13127 1097 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 PDIA6Q15084 440 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 RIC3Q7Z5B4 369 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 KRT222Q8N1A0 295 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 ERO1AQ96HE7 468 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 FSD1Q9BTV5 496 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 TFIP11Q9UBB9 837 aaKnown RBP15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 CFAP45Q9UL16 551 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 UTYO14607 1347 aa15.02□□□□□ -0.01
CALCOCO1-217ENST00000549935 IGKV5-2P06315 115 aa15.01□□□□□ -0.01
CALCOCO1-217ENST00000549935 MYL6BP14649 208 aa15.01□□□□□ -0.01
CALCOCO1-217ENST00000549935 SLC39A6Q13433 755 aa15.01□□□□□ -0.01
CALCOCO1-217ENST00000549935 KRT32Q14532 448 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms