RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
CCDC38-207ENST00000549752 SMC1BQ8NDV3 1235 aa13.44□□□□□ -0.26
CCDC38-207ENST00000549752 JDP2Q8WYK2 163 aa13.44□□□□□ -0.26
CCDC38-207ENST00000549752 STK31Q9BXU1 1019 aa13.44□□□□□ -0.26
CCDC38-207ENST00000549752 IQCA1LA6NCM1 817 aa13.43□□□□□ -0.26
CCDC38-207ENST00000549752 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
CCDC38-207ENST00000549752 BBOX1O75936 387 aa13.43□□□□□ -0.26
CCDC38-207ENST00000549752 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
CCDC38-207ENST00000549752 TRIM28Q13263 835 aaKnown RBP13.43□□□□□ -0.26
CCDC38-207ENST00000549752 DDX46Q7L014 1031 aaKnown RBP13.43□□□□□ -0.26
CCDC38-207ENST00000549752 TMC4Q7Z404 712 aa13.43□□□□□ -0.26
CCDC38-207ENST00000549752 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
CCDC38-207ENST00000549752 SUPT20HQ8NEM7 779 aa13.42□□□□□ -0.26
CCDC38-207ENST00000549752 ISCA1Q9BUE6 129 aa13.42□□□□□ -0.26
CCDC38-207ENST00000549752 VPS33BQ9H267 617 aa13.42□□□□□ -0.26
CCDC38-207ENST00000549752 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
CCDC38-207ENST00000549752 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
CCDC38-207ENST00000549752 WDR63Q8IWG1 891 aa13.41□□□□□ -0.26
CCDC38-207ENST00000549752 C8orf58Q8NAV2 365 aa13.41□□□□□ -0.26
CCDC38-207ENST00000549752 ATP6V0A2Q9Y487 856 aa13.41□□□□□ -0.26
CCDC38-207ENST00000549752 ABCC4O15439 1325 aa13.4□□□□□ -0.26
CCDC38-207ENST00000549752 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
CCDC38-207ENST00000549752 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
CCDC38-207ENST00000549752 HS6ST3Q8IZP7 471 aa13.4□□□□□ -0.26
CCDC38-207ENST00000549752 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
CCDC38-207ENST00000549752 ATP5J2-PTCD1G3V325 749 aa13.39□□□□□ -0.27
CCDC38-207ENST00000549752 DDNO94850 711 aaPredicted RBP13.39□□□□□ -0.27
CCDC38-207ENST00000549752 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
CCDC38-207ENST00000549752 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
CCDC38-207ENST00000549752 GRAPQ13588 217 aa13.39□□□□□ -0.27
CCDC38-207ENST00000549752 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
CCDC38-207ENST00000549752 SP8Q8IXZ3 490 aa13.39□□□□□ -0.27
CCDC38-207ENST00000549752 LARGE2Q8N3Y3 721 aa13.39□□□□□ -0.27
CCDC38-207ENST00000549752 CCDC191Q8NCU4 936 aa13.39□□□□□ -0.27
CCDC38-207ENST00000549752 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
CCDC38-207ENST00000549752 TSR2Q969E8 191 aaKnown RBP13.39□□□□□ -0.27
CCDC38-207ENST00000549752 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
CCDC38-207ENST00000549752 PHAXQ9H814 394 aaKnown RBP13.39□□□□□ -0.27
CCDC38-207ENST00000549752 FZD9O00144 591 aa13.38□□□□□ -0.27
CCDC38-207ENST00000549752 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
CCDC38-207ENST00000549752 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
CCDC38-207ENST00000549752 NIM1KQ8IY84 436 aa13.38□□□□□ -0.27
CCDC38-207ENST00000549752 GPC2Q8N158 579 aa13.38□□□□□ -0.27
CCDC38-207ENST00000549752 ZBTB38Q8NAP3 1195 aaPredicted RBP13.38□□□□□ -0.27
CCDC38-207ENST00000549752 FAM89AQ96GI7 184 aa13.38□□□□□ -0.27
CCDC38-207ENST00000549752 METTL22Q9BUU2 404 aaPredicted RBP13.38□□□□□ -0.27
CCDC38-207ENST00000549752 CWC25Q9NXE8 425 aaPredicted RBP13.38□□□□□ -0.27
CCDC38-207ENST00000549752 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
CCDC38-207ENST00000549752 IRS4O14654 1257 aaPredicted RBP13.37□□□□□ -0.27
CCDC38-207ENST00000549752 TCERG1O14776 1098 aaKnown RBP13.37□□□□□ -0.27
CCDC38-207ENST00000549752 DPP8Q6V1X1 898 aaPredicted RBP13.37□□□□□ -0.27
CCDC38-207ENST00000549752 KSR2Q6VAB6 950 aa13.37□□□□□ -0.27
CCDC38-207ENST00000549752 FAM9BQ8IZU0 186 aa13.37□□□□□ -0.27
CCDC38-207ENST00000549752 MPNDQ8N594 471 aa13.37□□□□□ -0.27
CCDC38-207ENST00000549752 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
CCDC38-207ENST00000549752 MYD88Q99836 296 aa13.37□□□□□ -0.27
CCDC38-207ENST00000549752 MYH16Q9H6N6 1097 aa13.37□□□□□ -0.27
CCDC38-207ENST00000549752 TRPM7Q96QT4 1865 aa13.36□□□□□ -0.27
CCDC38-207ENST00000549752 POTECB2RU33 542 aa13.36□□□□□ -0.27
CCDC38-207ENST00000549752 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
CCDC38-207ENST00000549752 PCCAP05165 728 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-207ENST00000549752 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-207ENST00000549752 RTFDC1Q9BY42 306 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-207ENST00000549752 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
CCDC38-207ENST00000549752 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
CCDC38-207ENST00000549752 PDE8AO60658 829 aa13.35□□□□□ -0.27
CCDC38-207ENST00000549752 LMOD1P29536 600 aaPredicted RBP13.35□□□□□ -0.27
CCDC38-207ENST00000549752 CCDC152Q4G0S7 254 aa13.35□□□□□ -0.27
CCDC38-207ENST00000549752 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
CCDC38-207ENST00000549752 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
CCDC38-207ENST00000549752 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
CCDC38-207ENST00000549752 MAP3K2Q9Y2U5 619 aa13.35□□□□□ -0.27
CCDC38-207ENST00000549752 SALL2Q9Y467 1007 aaPredicted RBP13.35□□□□□ -0.27
CCDC38-207ENST00000549752 ZNF541Q9H0D2 1346 aa13.35□□□□□ -0.27
CCDC38-207ENST00000549752 PI4KAP2A4QPH2 592 aa13.34□□□□□ -0.27
CCDC38-207ENST00000549752 RTL5Q5HYW3 569 aaPredicted RBP13.34□□□□□ -0.27
CCDC38-207ENST00000549752 PI4KAP1Q8N8J0 262 aa13.34□□□□□ -0.27
CCDC38-207ENST00000549752 FAM212AQ96EL1 285 aa13.34□□□□□ -0.27
CCDC38-207ENST00000549752 TAF1DQ9H5J8 278 aaPredicted RBP13.34□□□□□ -0.27
CCDC38-207ENST00000549752 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
CCDC38-207ENST00000549752 ADAMTSL1Q8N6G6 1762 aa13.33□□□□□ -0.28
CCDC38-207ENST00000549752 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
CCDC38-207ENST00000549752 ZNRF3Q9ULT6 936 aa13.33□□□□□ -0.28
CCDC38-207ENST00000549752 GJA3Q9Y6H8 435 aa13.33□□□□□ -0.28
CCDC38-207ENST00000549752 PSME4Q14997 1843 aa13.33□□□□□ -0.28
CCDC38-207ENST00000549752 LTBP1Q14766 1721 aa13.33□□□□□ -0.28
CCDC38-207ENST00000549752 EPHX2P34913 555 aa13.32□□□□□ -0.28
CCDC38-207ENST00000549752 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
CCDC38-207ENST00000549752 KIAA2012Q0VF49 1180 aa13.32□□□□□ -0.28
CCDC38-207ENST00000549752 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
CCDC38-207ENST00000549752 TNIP1Q15025 636 aa13.32□□□□□ -0.28
CCDC38-207ENST00000549752 AOC3Q16853 763 aa13.32□□□□□ -0.28
CCDC38-207ENST00000549752 EYA3Q99504 573 aa13.32□□□□□ -0.28
CCDC38-207ENST00000549752 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
CCDC38-207ENST00000549752 COL4A5P29400 1685 aa13.31□□□□□ -0.28
CCDC38-207ENST00000549752 POLR2AP24928 1970 aaKnown RBP13.31□□□□□ -0.28
CCDC38-207ENST00000549752 VAMP4O75379 141 aa13.31□□□□□ -0.28
CCDC38-207ENST00000549752 PRR29P0C7W0 189 aa13.31□□□□□ -0.28
CCDC38-207ENST00000549752 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
CCDC38-207ENST00000549752 FLIIQ13045 1269 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms