RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 IFIT5Q13325 482 aaKnown RBP21.56■■□□□ 1.04
LETMD1-220ENST00000549686 ERC1Q8IUD2 1116 aa21.56■■□□□ 1.04
LETMD1-220ENST00000549686 FBXO3Q9UK99 471 aa21.56■■□□□ 1.04
LETMD1-220ENST00000549686 DDR1Q08345 913 aa21.55■■□□□ 1.04
LETMD1-220ENST00000549686 SF3B3Q15393 1217 aaKnown RBP21.55■■□□□ 1.04
LETMD1-220ENST00000549686 NLRP3Q96P20 1036 aa21.55■■□□□ 1.04
LETMD1-220ENST00000549686 PARP3Q9Y6F1 533 aa21.55■■□□□ 1.04
LETMD1-220ENST00000549686 ANKRD18BA2A2Z9 1011 aa21.54■■□□□ 1.04
LETMD1-220ENST00000549686 G3BP1Q13283 466 aaKnown RBP eCLIP21.54■■□□□ 1.04
LETMD1-220ENST00000549686 PRR5LQ6MZQ0 368 aa21.54■■□□□ 1.04
LETMD1-220ENST00000549686 ABCC12Q96J65 1359 aa21.53■■□□□ 1.04
LETMD1-220ENST00000549686 MMP10P09238 476 aa21.53■■□□□ 1.04
LETMD1-220ENST00000549686 PTPN12Q05209 780 aaKnown RBP21.53■■□□□ 1.04
LETMD1-220ENST00000549686 OS9Q13438 667 aaPredicted RBP21.53■■□□□ 1.04
LETMD1-220ENST00000549686 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
LETMD1-220ENST00000549686 ANKRD45Q5TZF3 282 aa21.53■■□□□ 1.04
LETMD1-220ENST00000549686 CHD1LQ86WJ1 897 aa21.53■■□□□ 1.04
LETMD1-220ENST00000549686 PDZRN3Q9UPQ7 1066 aa21.53■■□□□ 1.04
LETMD1-220ENST00000549686 EXOC6BQ9Y2D4 811 aa21.53■■□□□ 1.04
LETMD1-220ENST00000549686 LAMB2P55268 1798 aa21.53■■□□□ 1.04
LETMD1-220ENST00000549686 TAF7LQ5H9L4 462 aa21.52■■□□□ 1.04
LETMD1-220ENST00000549686 KIF1BPQ96EK5 621 aa21.52■■□□□ 1.04
LETMD1-220ENST00000549686 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
LETMD1-220ENST00000549686 GREM2Q9H772 168 aa21.52■■□□□ 1.04
LETMD1-220ENST00000549686 CIAO1O76071 339 aa21.51■■□□□ 1.03
LETMD1-220ENST00000549686 ITGA6P23229 1130 aa21.51■■□□□ 1.03
LETMD1-220ENST00000549686 CDC5LQ99459 802 aaKnown RBP21.5■■□□□ 1.03
LETMD1-220ENST00000549686 PA2G4Q9UQ80 394 aaKnown RBP21.5■■□□□ 1.03
LETMD1-220ENST00000549686 EYA2O00167 538 aa21.49■■□□□ 1.03
LETMD1-220ENST00000549686 IL15P40933 162 aaPredicted RBP21.49■■□□□ 1.03
LETMD1-220ENST00000549686 MSL1Q68DK7 614 aa21.49■■□□□ 1.03
LETMD1-220ENST00000549686 ILDR2Q71H61 639 aa21.49■■□□□ 1.03
LETMD1-220ENST00000549686 PELP1Q8IZL8 1130 aaKnown RBP21.49■■□□□ 1.03
LETMD1-220ENST00000549686 DDX60Q8IY21 1712 aaKnown RBP21.49■■□□□ 1.03
LETMD1-220ENST00000549686 RHPN1Q8TCX5 695 aa21.48■■□□□ 1.03
LETMD1-220ENST00000549686 BRIP1Q9BX63 1249 aa21.48■■□□□ 1.03
LETMD1-220ENST00000549686 CCDC85AQ96PX6 553 aaPredicted RBP21.47■■□□□ 1.03
LETMD1-220ENST00000549686 MYH3P11055 1940 aa21.47■■□□□ 1.03
LETMD1-220ENST00000549686 KLRG2A4D1S0 409 aaPredicted RBP21.46■■□□□ 1.03
LETMD1-220ENST00000549686 IGHMBP2P38935 993 aaKnown RBP21.46■■□□□ 1.03
LETMD1-220ENST00000549686 KLHDC4Q8TBB5 520 aa21.46■■□□□ 1.03
LETMD1-220ENST00000549686 LNPKQ9C0E8 428 aa21.46■■□□□ 1.03
LETMD1-220ENST00000549686 SIL1Q9H173 461 aa21.46■■□□□ 1.03
LETMD1-220ENST00000549686 NRXN2Q9P2S2 1712 aa21.46■■□□□ 1.03
LETMD1-220ENST00000549686 APBB1O00213 710 aa21.45■■□□□ 1.02
LETMD1-220ENST00000549686 PDE6BP35913 854 aa21.45■■□□□ 1.02
LETMD1-220ENST00000549686 CRY2Q49AN0 593 aa21.45■■□□□ 1.02
LETMD1-220ENST00000549686 LDHAL6AQ6ZMR3 332 aa21.45■■□□□ 1.02
LETMD1-220ENST00000549686 C3orf67Q6ZVT6 689 aa21.45■■□□□ 1.02
LETMD1-220ENST00000549686 DDX46Q7L014 1031 aaKnown RBP21.45■■□□□ 1.02
LETMD1-220ENST00000549686 CLASRPQ8N2M8 674 aaKnown RBP21.45■■□□□ 1.02
LETMD1-220ENST00000549686 MTFR1LQ9H019 292 aa21.45■■□□□ 1.02
LETMD1-220ENST00000549686 R3HDM1Q15032 1099 aaKnown RBP21.44■■□□□ 1.02
LETMD1-220ENST00000549686 ANKRD18AQ8IVF6 992 aa21.44■■□□□ 1.02
LETMD1-220ENST00000549686 MPHOSPH8Q99549 860 aa21.44■■□□□ 1.02
LETMD1-220ENST00000549686 SASH1O94885 1247 aa21.43■■□□□ 1.02
LETMD1-220ENST00000549686 ATG9AQ7Z3C6 839 aa21.43■■□□□ 1.02
LETMD1-220ENST00000549686 RPGRQ92834 1020 aaKnown RBP21.43■■□□□ 1.02
LETMD1-220ENST00000549686 ZNF594Q96JF6 807 aaPredicted RBP21.43■■□□□ 1.02
LETMD1-220ENST00000549686 PDGFDQ9GZP0 370 aaPredicted RBP21.43■■□□□ 1.02
LETMD1-220ENST00000549686 GPR108Q9NPR9 543 aa21.43■■□□□ 1.02
LETMD1-220ENST00000549686 CNNM1Q9NRU3 951 aa21.43■■□□□ 1.02
LETMD1-220ENST00000549686 LRP5O75197 1615 aa21.42■■□□□ 1.02
LETMD1-220ENST00000549686 MROH5Q6ZUA9 1318 aa21.42■■□□□ 1.02
LETMD1-220ENST00000549686 CCDC24Q8N4L8 307 aa21.42■■□□□ 1.02
LETMD1-220ENST00000549686 RBM17Q96I25 401 aaKnown RBP21.42■■□□□ 1.02
LETMD1-220ENST00000549686 SEC31BQ9NQW1 1179 aa21.42■■□□□ 1.02
LETMD1-220ENST00000549686 CEP126Q9P2H0 1117 aa21.42■■□□□ 1.02
LETMD1-220ENST00000549686 POLD1P28340 1107 aa21.41■■□□□ 1.02
LETMD1-220ENST00000549686 HOXA10P31260 410 aaPredicted RBP21.41■■□□□ 1.02
LETMD1-220ENST00000549686 BSDC1Q9NW68 430 aaPredicted RBP21.41■■□□□ 1.02
LETMD1-220ENST00000549686 RIPOR2Q9Y4F9 1068 aa21.41■■□□□ 1.02
LETMD1-220ENST00000549686 SMARCA5O60264 1052 aaPredicted RBP21.4■■□□□ 1.02
LETMD1-220ENST00000549686 PDE4AP27815 886 aa21.4■■□□□ 1.02
LETMD1-220ENST00000549686 RPS8P62241 208 aaKnown RBP21.4■■□□□ 1.02
LETMD1-220ENST00000549686 GRAPQ13588 217 aa21.4■■□□□ 1.02
LETMD1-220ENST00000549686 LRRC24Q50LG9 513 aa21.4■■□□□ 1.02
LETMD1-220ENST00000549686 GRAPLQ8TC17 118 aaPredicted RBP21.4■■□□□ 1.02
LETMD1-220ENST00000549686 CRAMP1Q96RY5 1269 aa21.4■■□□□ 1.02
LETMD1-220ENST00000549686 IL1RAPL2Q9NP60 686 aa21.4■■□□□ 1.02
LETMD1-220ENST00000549686 AKAP2Q9Y2D5 859 aa21.4■■□□□ 1.02
LETMD1-220ENST00000549686 CASZ1Q86V15 1759 aa21.4■■□□□ 1.02
LETMD1-220ENST00000549686 RGS3P49796 1198 aa21.39■■□□□ 1.01
LETMD1-220ENST00000549686 TFCP2Q12800 502 aa21.39■■□□□ 1.01
LETMD1-220ENST00000549686 PUS3Q9BZE2 481 aaKnown RBP21.39■■□□□ 1.01
LETMD1-220ENST00000549686 TNRC6CQ9HCJ0 1690 aaKnown RBP21.38■■□□□ 1.01
LETMD1-220ENST00000549686 IFIT2P09913 472 aaKnown RBP21.38■■□□□ 1.01
LETMD1-220ENST00000549686 NPR1P16066 1061 aa21.38■■□□□ 1.01
LETMD1-220ENST00000549686 METTL24Q5JXM2 366 aa21.38■■□□□ 1.01
LETMD1-220ENST00000549686 TMC4Q7Z404 712 aa21.38■■□□□ 1.01
LETMD1-220ENST00000549686 BBOX1O75936 387 aa21.37■■□□□ 1.01
LETMD1-220ENST00000549686 ZBTB7AO95365 584 aa21.37■■□□□ 1.01
LETMD1-220ENST00000549686 TNNI3KQ59H18 835 aa21.37■■□□□ 1.01
LETMD1-220ENST00000549686 AACSQ86V21 672 aa21.37■■□□□ 1.01
LETMD1-220ENST00000549686 GPATCH3Q96I76 525 aa21.37■■□□□ 1.01
LETMD1-220ENST00000549686 FPGT-TNNI3KV9GXZ4 949 aa21.37■■□□□ 1.01
LETMD1-220ENST00000549686 AOX1Q06278 1338 aa21.36■■□□□ 1.01
LETMD1-220ENST00000549686 SRGNP10124 158 aa21.36■■□□□ 1.01
LETMD1-220ENST00000549686 PLEKHM2Q8IWE5 1019 aa21.36■■□□□ 1.01
LETMD1-220ENST00000549686 CELF1Q92879 486 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms