RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TFCP2Q12800 502 aa12.09□□□□□ -0.47
RAB5B-206ENST00000549505 NLRP10Q86W26 655 aa12.09□□□□□ -0.47
RAB5B-206ENST00000549505 TLR7Q9NYK1 1049 aaKnown RBP12.09□□□□□ -0.47
RAB5B-206ENST00000549505 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
RAB5B-206ENST00000549505 PTCD1O75127 700 aaKnown RBP12.08□□□□□ -0.48
RAB5B-206ENST00000549505 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
RAB5B-206ENST00000549505 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
RAB5B-206ENST00000549505 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
RAB5B-206ENST00000549505 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
RAB5B-206ENST00000549505 TNPO1Q92973 898 aaKnown RBP12.08□□□□□ -0.48
RAB5B-206ENST00000549505 SMARCC1Q92922 1105 aaPredicted RBP12.07□□□□□ -0.48
RAB5B-206ENST00000549505 DDB1Q16531 1140 aa12.07□□□□□ -0.48
RAB5B-206ENST00000549505 ANO2Q9NQ90 1003 aa12.07□□□□□ -0.48
RAB5B-206ENST00000549505 HMG20BQ9P0W2 317 aa12.07□□□□□ -0.48
RAB5B-206ENST00000549505 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
RAB5B-206ENST00000549505 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
RAB5B-206ENST00000549505 ATRNO75882 1429 aa12.07□□□□□ -0.48
RAB5B-206ENST00000549505 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
RAB5B-206ENST00000549505 DIAPH3Q9NSV4 1193 aa12.06□□□□□ -0.48
RAB5B-206ENST00000549505 PDIA4P13667 645 aaKnown RBP12.06□□□□□ -0.48
RAB5B-206ENST00000549505 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
RAB5B-206ENST00000549505 TMX3Q96JJ7 454 aa12.06□□□□□ -0.48
RAB5B-206ENST00000549505 CASZ1Q86V15 1759 aa12.06□□□□□ -0.48
RAB5B-206ENST00000549505 SKOR2Q2VWA4 1001 aaPredicted RBP12.06□□□□□ -0.48
RAB5B-206ENST00000549505 VGLL2Q8N8G2 317 aa12.06□□□□□ -0.48
RAB5B-206ENST00000549505 GBP4Q96PP9 640 aa12.06□□□□□ -0.48
RAB5B-206ENST00000549505 CNTNAP4Q9C0A0 1308 aa12.05□□□□□ -0.48
RAB5B-206ENST00000549505 KBTBD3Q8NAB2 608 aa12.05□□□□□ -0.48
RAB5B-206ENST00000549505 HELLSQ9NRZ9 838 aa12.05□□□□□ -0.48
RAB5B-206ENST00000549505 AKAP2Q9Y2D5 859 aa12.05□□□□□ -0.48
RAB5B-206ENST00000549505 RIPOR2Q9Y4F9 1068 aa12.05□□□□□ -0.48
RAB5B-206ENST00000549505 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
RAB5B-206ENST00000549505 FBXL16Q8N461 479 aa12.05□□□□□ -0.48
RAB5B-206ENST00000549505 CCDC8Q9H0W5 538 aaPredicted RBP12.05□□□□□ -0.48
RAB5B-206ENST00000549505 SBF2Q86WG5 1849 aa12.05□□□□□ -0.48
RAB5B-206ENST00000549505 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
RAB5B-206ENST00000549505 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
RAB5B-206ENST00000549505 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 ZBTB3Q9H5J0 574 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 AKAP11Q9UKA4 1901 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 NEK4P51957 841 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 PTH1RQ03431 593 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 NMIQ13287 307 aaPredicted RBP12.04□□□□□ -0.48
RAB5B-206ENST00000549505 PARP10Q53GL7 1025 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
RAB5B-206ENST00000549505 BTAF1O14981 1849 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 FSD2A1L4K1 749 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 TAF5LO75529 589 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 KIAA1211Q6ZU35 1233 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 TTLL11Q8NHH1 800 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 ZSCAN31Q96LW9 406 aaPredicted RBP12.04□□□□□ -0.48
RAB5B-206ENST00000549505 ZBTB1Q9Y2K1 713 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 ZDHHC9Q9Y397 364 aa12.04□□□□□ -0.48
RAB5B-206ENST00000549505 MYH7P12883 1935 aa12.03□□□□□ -0.48
RAB5B-206ENST00000549505 CAMTA2O94983 1202 aa12.03□□□□□ -0.48
RAB5B-206ENST00000549505 BRD1O95696 1058 aa12.03□□□□□ -0.48
RAB5B-206ENST00000549505 CTSWP56202 376 aa12.03□□□□□ -0.48
RAB5B-206ENST00000549505 HLFQ16534 295 aa12.03□□□□□ -0.48
RAB5B-206ENST00000549505 DBNDD2Q9BQY9 259 aa12.03□□□□□ -0.48
RAB5B-206ENST00000549505 PDE8AO60658 829 aa12.03□□□□□ -0.48
RAB5B-206ENST00000549505 CWC27Q6UX04 472 aaKnown RBP12.03□□□□□ -0.48
RAB5B-206ENST00000549505 UBN2Q6ZU65 1347 aa12.03□□□□□ -0.48
RAB5B-206ENST00000549505 SSFA2P28290 1259 aa12.02□□□□□ -0.48
RAB5B-206ENST00000549505 DSCC1Q9BVC3 393 aa12.02□□□□□ -0.48
RAB5B-206ENST00000549505 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 A0A0D9SFI3 127 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 HSP90B1P14625 803 aaKnown RBP12.02□□□□□ -0.49
RAB5B-206ENST00000549505 SIK1P57059 783 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 ZMYM1Q5SVZ6 1142 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 SIL1Q9H173 461 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
RAB5B-206ENST00000549505 LAMA4Q16363 1823 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 CREB3L3Q68CJ9 461 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 RUFY3Q7L099 469 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
RAB5B-206ENST00000549505 SLC27A2O14975 620 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
RAB5B-206ENST00000549505 FGFR2P21802 821 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 FAM227BQ96M60 508 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
RAB5B-206ENST00000549505 PSMA5P28066 241 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 KRT32Q14532 448 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 CCDC57Q2TAC2 916 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 MCMDC2Q4G0Z9 681 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 LRRC24Q50LG9 513 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 DZIP3Q86Y13 1208 aaKnown RBP12.01□□□□□ -0.49
RAB5B-206ENST00000549505 RGS22Q8NE09 1264 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 BOLA2Q9H3K6 86 aa12.01□□□□□ -0.49
RAB5B-206ENST00000549505 RBM8AQ9Y5S9 174 aaKnown RBP12.01□□□□□ -0.49
RAB5B-206ENST00000549505 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
RAB5B-206ENST00000549505 ZFYP08048 801 aaPredicted RBP12□□□□□ -0.49
RAB5B-206ENST00000549505 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
RAB5B-206ENST00000549505 ITPK1Q13572 414 aa12□□□□□ -0.49
RAB5B-206ENST00000549505 AGXT2Q9BYV1 514 aa12□□□□□ -0.49
RAB5B-206ENST00000549505 RNF20Q5VTR2 975 aa12□□□□□ -0.49
RAB5B-206ENST00000549505 FSD1Q9BTV5 496 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms