RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 G3BP1Q13283 466 aaKnown RBP eCLIP17.51■□□□□ 0.39
CACNB3-211ENST00000549226 SF3B3Q15393 1217 aaKnown RBP17.51■□□□□ 0.39
CACNB3-211ENST00000549226 CHD1LQ86WJ1 897 aa17.51■□□□□ 0.39
CACNB3-211ENST00000549226 LRRCC1Q9C099 1032 aa17.51■□□□□ 0.39
CACNB3-211ENST00000549226 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
CACNB3-211ENST00000549226 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
CACNB3-211ENST00000549226 POLRMTO00411 1230 aaKnown RBP17.5■□□□□ 0.39
CACNB3-211ENST00000549226 CIAO1O76071 339 aa17.5■□□□□ 0.39
CACNB3-211ENST00000549226 SERPINB2P05120 415 aa17.5■□□□□ 0.39
CACNB3-211ENST00000549226 PTPN12Q05209 780 aaKnown RBP17.5■□□□□ 0.39
CACNB3-211ENST00000549226 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
CACNB3-211ENST00000549226 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
CACNB3-211ENST00000549226 NUTM1Q86Y26 1132 aa17.5■□□□□ 0.39
CACNB3-211ENST00000549226 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
CACNB3-211ENST00000549226 LAMB2P55268 1798 aa17.49■□□□□ 0.39
CACNB3-211ENST00000549226 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-211ENST00000549226 OS9Q13438 667 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-211ENST00000549226 FAM161AQ3B820 660 aa17.49■□□□□ 0.39
CACNB3-211ENST00000549226 TAF7LQ5H9L4 462 aa17.49■□□□□ 0.39
CACNB3-211ENST00000549226 EXOC6BQ9Y2D4 811 aa17.49■□□□□ 0.39
CACNB3-211ENST00000549226 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
CACNB3-211ENST00000549226 TUBGCP6Q96RT7 1819 aa17.49■□□□□ 0.39
CACNB3-211ENST00000549226 IL15P40933 162 aaPredicted RBP17.48■□□□□ 0.39
CACNB3-211ENST00000549226 PRR5LQ6MZQ0 368 aa17.48■□□□□ 0.39
CACNB3-211ENST00000549226 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
CACNB3-211ENST00000549226 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
CACNB3-211ENST00000549226 ITGA6P23229 1130 aa17.47■□□□□ 0.39
CACNB3-211ENST00000549226 DDR1Q08345 913 aa17.47■□□□□ 0.39
CACNB3-211ENST00000549226 CDC5LQ99459 802 aaKnown RBP17.47■□□□□ 0.39
CACNB3-211ENST00000549226 GREM2Q9H772 168 aa17.47■□□□□ 0.39
CACNB3-211ENST00000549226 EYA2O00167 538 aa17.46■□□□□ 0.39
CACNB3-211ENST00000549226 MMP10P09238 476 aa17.46■□□□□ 0.39
CACNB3-211ENST00000549226 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.39
CACNB3-211ENST00000549226 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.39
CACNB3-211ENST00000549226 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
CACNB3-211ENST00000549226 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
CACNB3-211ENST00000549226 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
CACNB3-211ENST00000549226 BRIP1Q9BX63 1249 aa17.44■□□□□ 0.38
CACNB3-211ENST00000549226 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
CACNB3-211ENST00000549226 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
CACNB3-211ENST00000549226 KLRG2A4D1S0 409 aaPredicted RBP17.43■□□□□ 0.38
CACNB3-211ENST00000549226 CRY2Q49AN0 593 aa17.43■□□□□ 0.38
CACNB3-211ENST00000549226 SIL1Q9H173 461 aa17.43■□□□□ 0.38
CACNB3-211ENST00000549226 LRP5O75197 1615 aa17.43■□□□□ 0.38
CACNB3-211ENST00000549226 MYH3P11055 1940 aa17.43■□□□□ 0.38
CACNB3-211ENST00000549226 NRXN2Q9P2S2 1712 aa17.42■□□□□ 0.38
CACNB3-211ENST00000549226 APBB1O00213 710 aa17.42■□□□□ 0.38
CACNB3-211ENST00000549226 LDHAL6AQ6ZMR3 332 aa17.42■□□□□ 0.38
CACNB3-211ENST00000549226 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
CACNB3-211ENST00000549226 MPHOSPH8Q99549 860 aa17.42■□□□□ 0.38
CACNB3-211ENST00000549226 MROH5Q6ZUA9 1318 aa17.42■□□□□ 0.38
CACNB3-211ENST00000549226 PDE6BP35913 854 aa17.41■□□□□ 0.38
CACNB3-211ENST00000549226 ANKRD18AQ8IVF6 992 aa17.41■□□□□ 0.38
CACNB3-211ENST00000549226 KLHDC4Q8TBB5 520 aa17.41■□□□□ 0.38
CACNB3-211ENST00000549226 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
CACNB3-211ENST00000549226 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
CACNB3-211ENST00000549226 MTFR1LQ9H019 292 aa17.41■□□□□ 0.38
CACNB3-211ENST00000549226 CNNM1Q9NRU3 951 aa17.41■□□□□ 0.38
CACNB3-211ENST00000549226 AKAP2Q9Y2D5 859 aa17.41■□□□□ 0.38
CACNB3-211ENST00000549226 AOX1Q06278 1338 aa17.41■□□□□ 0.38
CACNB3-211ENST00000549226 SASH1O94885 1247 aa17.4■□□□□ 0.38
CACNB3-211ENST00000549226 MSL1Q68DK7 614 aa17.4■□□□□ 0.38
CACNB3-211ENST00000549226 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
CACNB3-211ENST00000549226 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
CACNB3-211ENST00000549226 OSBPL3Q9H4L5 887 aa17.4■□□□□ 0.38
CACNB3-211ENST00000549226 CEP126Q9P2H0 1117 aa17.4■□□□□ 0.38
CACNB3-211ENST00000549226 PDE4AP27815 886 aa17.39■□□□□ 0.37
CACNB3-211ENST00000549226 HOXA10P31260 410 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-211ENST00000549226 RGS3P49796 1198 aa17.39■□□□□ 0.37
CACNB3-211ENST00000549226 C3orf67Q6ZVT6 689 aa17.39■□□□□ 0.37
CACNB3-211ENST00000549226 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
CACNB3-211ENST00000549226 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.37
CACNB3-211ENST00000549226 ZNF594Q96JF6 807 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-211ENST00000549226 BSDC1Q9NW68 430 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-211ENST00000549226 RIPOR2Q9Y4F9 1068 aa17.39■□□□□ 0.37
CACNB3-211ENST00000549226 SMARCA5O60264 1052 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-211ENST00000549226 IFIT2P09913 472 aaKnown RBP17.38■□□□□ 0.37
CACNB3-211ENST00000549226 POLD1P28340 1107 aa17.38■□□□□ 0.37
CACNB3-211ENST00000549226 GRAPQ13588 217 aa17.38■□□□□ 0.37
CACNB3-211ENST00000549226 GRAPLQ8TC17 118 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-211ENST00000549226 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
CACNB3-211ENST00000549226 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
CACNB3-211ENST00000549226 STAP2Q9UGK3 403 aa17.38■□□□□ 0.37
CACNB3-211ENST00000549226 MX1P20591 662 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 RPS8P62241 208 aaKnown RBP17.37■□□□□ 0.37
CACNB3-211ENST00000549226 TFCP2Q12800 502 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 LRRC24Q50LG9 513 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 SALL3Q9BXA9 1300 aa17.37■□□□□ 0.37
CACNB3-211ENST00000549226 BBOX1O75936 387 aa17.36■□□□□ 0.37
CACNB3-211ENST00000549226 NPR1P16066 1061 aa17.36■□□□□ 0.37
CACNB3-211ENST00000549226 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
CACNB3-211ENST00000549226 AACSQ86V21 672 aa17.36■□□□□ 0.37
CACNB3-211ENST00000549226 PUS3Q9BZE2 481 aaKnown RBP17.36■□□□□ 0.37
CACNB3-211ENST00000549226 ERC2O15083 957 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms