RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 BICC1Q9H694 974 aaKnown RBP33.12■■■□□ 2.89
CHPT1-204ENST00000549128 DDX19BQ9UMR2 479 aa33.12■■■□□ 2.89
CHPT1-204ENST00000549128 LRRFIP2Q9Y608 721 aaKnown RBP33.12■■■□□ 2.89
CHPT1-204ENST00000549128 WWC3Q9ULE0 1092 aa33.11■■■□□ 2.89
CHPT1-204ENST00000549128 ANKRD44Q8N8A2 993 aa33.1■■■□□ 2.89
CHPT1-204ENST00000549128 CRBNQ96SW2 442 aa33.1■■■□□ 2.89
CHPT1-204ENST00000549128 CSF1RP07333 972 aa33.09■■■□□ 2.89
CHPT1-204ENST00000549128 LMBR1LQ6UX01 489 aa33.09■■■□□ 2.89
CHPT1-204ENST00000549128 C1orf115Q9H7X2 142 aa33.09■■■□□ 2.89
CHPT1-204ENST00000549128 GOLGB1Q14789 3259 aaKnown RBP33.09■■■□□ 2.89
CHPT1-204ENST00000549128 IRX6P78412 446 aaPredicted RBP33.09■■■□□ 2.89
CHPT1-204ENST00000549128 ZNF622Q969S3 477 aaKnown RBP eCLIP33.09■■■□□ 2.89
CHPT1-204ENST00000549128 RPGRQ92834 1020 aaKnown RBP33.08■■■□□ 2.89
CHPT1-204ENST00000549128 MASTLQ96GX5 879 aa33.08■■■□□ 2.89
CHPT1-204ENST00000549128 GREM2Q9H772 168 aa33.08■■■□□ 2.89
CHPT1-204ENST00000549128 SEC31BQ9NQW1 1179 aa33.08■■■□□ 2.89
CHPT1-204ENST00000549128 PDZRN3Q9UPQ7 1066 aa33.08■■■□□ 2.89
CHPT1-204ENST00000549128 NPR1P16066 1061 aa33.07■■■□□ 2.88
CHPT1-204ENST00000549128 MYH3P11055 1940 aa33.07■■■□□ 2.88
CHPT1-204ENST00000549128 HOXA10P31260 410 aaPredicted RBP33.06■■■□□ 2.88
CHPT1-204ENST00000549128 RABL6Q3YEC7 729 aaPredicted RBP33.06■■■□□ 2.88
CHPT1-204ENST00000549128 CCDC152Q4G0S7 254 aa33.06■■■□□ 2.88
CHPT1-204ENST00000549128 ZBTB40Q9NUA8 1239 aa33.06■■■□□ 2.88
CHPT1-204ENST00000549128 COL4A1P02462 1669 aa33.05■■■□□ 2.88
CHPT1-204ENST00000549128 GNAI2P04899 355 aa33.05■■■□□ 2.88
CHPT1-204ENST00000549128 FAM161AQ3B820 660 aa33.05■■■□□ 2.88
CHPT1-204ENST00000549128 STYK1Q6J9G0 422 aa33.04■■■□□ 2.88
CHPT1-204ENST00000549128 CHMP3Q9Y3E7 222 aa33.04■■■□□ 2.88
CHPT1-204ENST00000549128 TAF1P21675 1872 aa33.04■■■□□ 2.88
CHPT1-204ENST00000549128 RBM17Q96I25 401 aaKnown RBP33.04■■■□□ 2.88
CHPT1-204ENST00000549128 DDX46Q7L014 1031 aaKnown RBP33.03■■■□□ 2.88
CHPT1-204ENST00000549128 DLEC1Q9Y238 1755 aa33.03■■■□□ 2.88
CHPT1-204ENST00000549128 CELF1Q92879 486 aaKnown RBP33.02■■■□□ 2.88
CHPT1-204ENST00000549128 PIM2Q9P1W9 311 aa33.02■■■□□ 2.88
CHPT1-204ENST00000549128 CRAMP1Q96RY5 1269 aa33.01■■■□□ 2.88
CHPT1-204ENST00000549128 ITGA6P23229 1130 aa33■■■□□ 2.87
CHPT1-204ENST00000549128 SLC51AQ86UW1 340 aa33■■■□□ 2.87
CHPT1-204ENST00000549128 HDAC5Q9UQL6 1122 aa33■■■□□ 2.87
CHPT1-204ENST00000549128 EXOC6Q8TAG9 804 aa33■■■□□ 2.87
CHPT1-204ENST00000549128 RTL9Q8NET4 1388 aa32.99■■■□□ 2.87
CHPT1-204ENST00000549128 BRCA1P38398 1863 aaKnown RBP32.99■■■□□ 2.87
CHPT1-204ENST00000549128 TTLL6Q8N841 843 aa32.99■■■□□ 2.87
CHPT1-204ENST00000549128 CNKSR1Q969H4 720 aa32.99■■■□□ 2.87
CHPT1-204ENST00000549128 ALDH1B1P30837 517 aa32.97■■■□□ 2.87
CHPT1-204ENST00000549128 GRAPQ13588 217 aa32.97■■■□□ 2.87
CHPT1-204ENST00000549128 PRPF40BQ6NWY9 871 aaKnown RBP32.97■■■□□ 2.87
CHPT1-204ENST00000549128 GRAPLQ8TC17 118 aaPredicted RBP32.97■■■□□ 2.87
CHPT1-204ENST00000549128 SLX4Q8IY92 1834 aa32.97■■■□□ 2.87
CHPT1-204ENST00000549128 CHMP4BQ9H444 224 aaKnown RBP32.96■■■□□ 2.87
CHPT1-204ENST00000549128 IFIT5Q13325 482 aaKnown RBP32.96■■■□□ 2.87
CHPT1-204ENST00000549128 DALRD3Q5D0E6 543 aaKnown RBP32.96■■■□□ 2.87
CHPT1-204ENST00000549128 ZNF594Q96JF6 807 aaPredicted RBP32.96■■■□□ 2.87
CHPT1-204ENST00000549128 CACNA1SQ13698 1873 aa32.95■■■□□ 2.87
CHPT1-204ENST00000549128 PNMA6EA0A0J9YXQ4 647 aa32.95■■■□□ 2.86
CHPT1-204ENST00000549128 ZNF219Q9P2Y4 722 aaPredicted RBP32.95■■■□□ 2.86
CHPT1-204ENST00000549128 BCS1LQ9Y276 419 aa32.95■■■□□ 2.86
CHPT1-204ENST00000549128 ANKRD18BA2A2Z9 1011 aa32.94■■■□□ 2.86
CHPT1-204ENST00000549128 RPS8P62241 208 aaKnown RBP32.94■■■□□ 2.86
CHPT1-204ENST00000549128 MTX1Q13505 466 aa32.94■■■□□ 2.86
CHPT1-204ENST00000549128 CCDC57Q2TAC2 916 aa32.94■■■□□ 2.86
CHPT1-204ENST00000549128 KLHDC4Q8TBB5 520 aa32.94■■■□□ 2.86
CHPT1-204ENST00000549128 RFX5P48382 616 aaPredicted RBP32.93■■■□□ 2.86
CHPT1-204ENST00000549128 CEP85Q6P2H3 762 aa32.93■■■□□ 2.86
CHPT1-204ENST00000549128 OLFM4Q6UX06 510 aa32.93■■■□□ 2.86
CHPT1-204ENST00000549128 CDC5LQ99459 802 aaKnown RBP32.92■■■□□ 2.86
CHPT1-204ENST00000549128 SRGAP3O43295 1099 aa32.92■■■□□ 2.86
CHPT1-204ENST00000549128 ATP8B2P98198 1209 aa32.92■■■□□ 2.86
CHPT1-204ENST00000549128 C7orf43Q8WVR3 580 aa32.92■■■□□ 2.86
CHPT1-204ENST00000549128 PPEF1O14829 653 aaPredicted RBP32.91■■■□□ 2.86
CHPT1-204ENST00000549128 BBOX1O75936 387 aa32.91■■■□□ 2.86
CHPT1-204ENST00000549128 ANKRD18AQ8IVF6 992 aa32.91■■■□□ 2.86
CHPT1-204ENST00000549128 C21orf2O43822 256 aa32.9■■■□□ 2.86
CHPT1-204ENST00000549128 YBX3P16989 372 aaKnown RBP eCLIP32.89■■■□□ 2.863e-11■□□□□ 10.3
CHPT1-204ENST00000549128 SIRT2Q8IXJ6 389 aa32.89■■■□□ 2.86
CHPT1-204ENST00000549128 PELP1Q8IZL8 1130 aaKnown RBP32.89■■■□□ 2.86
CHPT1-204ENST00000549128 UTRNP46939 3433 aa32.89■■■□□ 2.86
CHPT1-204ENST00000549128 PTPN12Q05209 780 aaKnown RBP32.88■■■□□ 2.85
CHPT1-204ENST00000549128 PCDHB15Q9Y5E8 787 aa32.88■■■□□ 2.85
CHPT1-204ENST00000549128 PA2G4Q9UQ80 394 aaKnown RBP32.87■■■□□ 2.85
CHPT1-204ENST00000549128 IGHMBP2P38935 993 aaKnown RBP32.87■■■□□ 2.85
CHPT1-204ENST00000549128 TAF7LQ5H9L4 462 aa32.87■■■□□ 2.85
CHPT1-204ENST00000549128 PUS3Q9BZE2 481 aaKnown RBP32.87■■■□□ 2.85
CHPT1-204ENST00000549128 ATP6V0A2Q9Y487 856 aa32.87■■■□□ 2.85
CHPT1-204ENST00000549128 POLA2Q14181 598 aa32.86■■■□□ 2.85
CHPT1-204ENST00000549128 SSH3Q8TE77 659 aa32.86■■■□□ 2.85
CHPT1-204ENST00000549128 SPEF2Q9C093 1822 aa32.85■■■□□ 2.85
CHPT1-204ENST00000549128 RPAP2Q8IXW5 612 aaPredicted RBP32.85■■■□□ 2.85
CHPT1-204ENST00000549128 BSDC1Q9NW68 430 aaPredicted RBP32.85■■■□□ 2.85
CHPT1-204ENST00000549128 SP8Q8IXZ3 490 aa32.84■■■□□ 2.85
CHPT1-204ENST00000549128 MPHOSPH8Q99549 860 aa32.84■■■□□ 2.85
CHPT1-204ENST00000549128 LRRC24Q50LG9 513 aa32.83■■■□□ 2.85
CHPT1-204ENST00000549128 LDHAL6AQ6ZMR3 332 aa32.83■■■□□ 2.85
CHPT1-204ENST00000549128 GPR162Q16538 588 aa32.82■■■□□ 2.84
CHPT1-204ENST00000549128 SIL1Q9H173 461 aa32.82■■■□□ 2.84
CHPT1-204ENST00000549128 COPRSQ9NQ92 184 aa32.82■■■□□ 2.84
CHPT1-204ENST00000549128 TMC4Q7Z404 712 aa32.81■■■□□ 2.84
CHPT1-204ENST00000549128 MINPP1Q9UNW1 487 aa32.81■■■□□ 2.84
CHPT1-204ENST00000549128 ARFGEF1Q9Y6D6 1849 aa32.8■■■□□ 2.84
CHPT1-204ENST00000549128 CNNM1Q9NRU3 951 aa32.8■■■□□ 2.84
CHPT1-204ENST00000549128 RIPOR2Q9Y4F9 1068 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms