RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 PSMD1Q99460 953 aa25.41■■□□□ 1.66
RBFOX1-211ENST00000548749 GLTPD2A6NH11 291 aa25.4■■□□□ 1.66
RBFOX1-211ENST00000548749 GRIPAP1Q4V328 841 aa25.4■■□□□ 1.66
RBFOX1-211ENST00000548749 IARSP41252 1262 aaKnown RBP25.39■■□□□ 1.66
RBFOX1-211ENST00000548749 RRAGCQ9HB90 399 aa25.39■■□□□ 1.66
RBFOX1-211ENST00000548749 F6X3S4 739 aa25.38■■□□□ 1.65
RBFOX1-211ENST00000548749 PDE8AO60658 829 aa25.38■■□□□ 1.65
RBFOX1-211ENST00000548749 DPY19L2Q6NUT2 758 aa25.38■■□□□ 1.65
RBFOX1-211ENST00000548749 CDHR2Q9BYE9 1310 aa25.37■■□□□ 1.65
RBFOX1-211ENST00000548749 SP8Q8IXZ3 490 aa25.37■■□□□ 1.65
RBFOX1-211ENST00000548749 CELF1Q92879 486 aaKnown RBP25.37■■□□□ 1.65
RBFOX1-211ENST00000548749 CCDC85AQ96PX6 553 aaPredicted RBP25.37■■□□□ 1.65
RBFOX1-211ENST00000548749 CCDC152Q4G0S7 254 aa25.36■■□□□ 1.65
RBFOX1-211ENST00000548749 UBE3BQ7Z3V4 1068 aa25.36■■□□□ 1.65
RBFOX1-211ENST00000548749 LINS1Q8NG48 757 aa25.36■■□□□ 1.65
RBFOX1-211ENST00000548749 GCKRQ14397 625 aa25.35■■□□□ 1.65
RBFOX1-211ENST00000548749 TMC4Q7Z404 712 aa25.35■■□□□ 1.65
RBFOX1-211ENST00000548749 COL4A1P02462 1669 aa25.35■■□□□ 1.65
RBFOX1-211ENST00000548749 DPP8Q6V1X1 898 aaPredicted RBP25.34■■□□□ 1.65
RBFOX1-211ENST00000548749 C16orf71Q8IYS4 520 aaPredicted RBP25.34■■□□□ 1.65
RBFOX1-211ENST00000548749 SEC31BQ9NQW1 1179 aa25.34■■□□□ 1.65
RBFOX1-211ENST00000548749 MYH3P11055 1940 aa25.33■■□□□ 1.65
RBFOX1-211ENST00000548749 H7C1W4 665 aa25.33■■□□□ 1.65
RBFOX1-211ENST00000548749 CTSWP56202 376 aa25.33■■□□□ 1.65
RBFOX1-211ENST00000548749 TRMT2AQ8IZ69 625 aaKnown RBP25.33■■□□□ 1.65
RBFOX1-211ENST00000548749 MPNDQ8N594 471 aa25.33■■□□□ 1.65
RBFOX1-211ENST00000548749 MRPL50Q8N5N7 158 aaKnown RBP25.33■■□□□ 1.65
RBFOX1-211ENST00000548749 JDP2Q8WYK2 163 aa25.33■■□□□ 1.65
RBFOX1-211ENST00000548749 DDNO94850 711 aaPredicted RBP25.32■■□□□ 1.64
RBFOX1-211ENST00000548749 SLC4A10Q6U841 1118 aa25.32■■□□□ 1.64
RBFOX1-211ENST00000548749 LARGE2Q8N3Y3 721 aa25.32■■□□□ 1.64
RBFOX1-211ENST00000548749 SSH1Q8WYL5 1049 aa25.32■■□□□ 1.64
RBFOX1-211ENST00000548749 BCL2L13Q9BXK5 485 aa25.32■■□□□ 1.64
RBFOX1-211ENST00000548749 LRRC37AA6NMS7 1700 aa25.32■■□□□ 1.64
RBFOX1-211ENST00000548749 PPIP5K2O43314 1243 aa25.31■■□□□ 1.64
RBFOX1-211ENST00000548749 RPS8P62241 208 aaKnown RBP25.31■■□□□ 1.64
RBFOX1-211ENST00000548749 BEND3Q5T5X7 828 aa25.31■■□□□ 1.64
RBFOX1-211ENST00000548749 SUPT20HQ8NEM7 779 aa25.31■■□□□ 1.64
RBFOX1-211ENST00000548749 ZNF541Q9H0D2 1346 aa25.31■■□□□ 1.64
RBFOX1-211ENST00000548749 WDR90Q96KV7 1748 aa25.3■■□□□ 1.64
RBFOX1-211ENST00000548749 TOMM70O94826 608 aa25.3■■□□□ 1.64
RBFOX1-211ENST00000548749 VEGFAP15692 232 aaPredicted RBP25.3■■□□□ 1.64
RBFOX1-211ENST00000548749 HNRNPUQ00839 825 aaKnown RBP eCLIP25.3■■□□□ 1.64
RBFOX1-211ENST00000548749 AOC3Q16853 763 aa25.3■■□□□ 1.64
RBFOX1-211ENST00000548749 COL4A5P29400 1685 aa25.29■■□□□ 1.64
RBFOX1-211ENST00000548749 RTFDC1Q9BY42 306 aaPredicted RBP25.29■■□□□ 1.64
RBFOX1-211ENST00000548749 FZD9O00144 591 aa25.28■■□□□ 1.64
RBFOX1-211ENST00000548749 NIM1KQ8IY84 436 aa25.28■■□□□ 1.64
RBFOX1-211ENST00000548749 TTLL11Q8NHH1 800 aa25.28■■□□□ 1.64
RBFOX1-211ENST00000548749 NSFL1CQ9UNZ2 370 aaKnown RBP25.28■■□□□ 1.64
RBFOX1-211ENST00000548749 CASP7P55210 303 aa25.27■■□□□ 1.64
RBFOX1-211ENST00000548749 ANKRD18AQ8IVF6 992 aa25.27■■□□□ 1.64
RBFOX1-211ENST00000548749 SMC4Q9NTJ3 1288 aa25.27■■□□□ 1.64
RBFOX1-211ENST00000548749 EIF6P56537 245 aaKnown RBP25.26■■□□□ 1.63
RBFOX1-211ENST00000548749 GPSM2P81274 684 aa25.26■■□□□ 1.63
RBFOX1-211ENST00000548749 ALDH1L2Q3SY69 923 aa25.26■■□□□ 1.63
RBFOX1-211ENST00000548749 SRCIN1Q9C0H9 1055 aa25.26■■□□□ 1.63
RBFOX1-211ENST00000548749 GREM2Q9H772 168 aa25.26■■□□□ 1.63
RBFOX1-211ENST00000548749 POTECB2RU33 542 aa25.25■■□□□ 1.63
RBFOX1-211ENST00000548749 RBM46Q8TBY0 533 aaKnown RBP25.25■■□□□ 1.63
RBFOX1-211ENST00000548749 CDC5LQ99459 802 aaKnown RBP25.25■■□□□ 1.63
RBFOX1-211ENST00000548749 PLA2G12BQ9BX93 195 aa25.25■■□□□ 1.63
RBFOX1-211ENST00000548749 VPS33BQ9H267 617 aa25.25■■□□□ 1.63
RBFOX1-211ENST00000548749 PTPRCP08575 1304 aa25.25■■□□□ 1.63
RBFOX1-211ENST00000548749 DUOX1Q9NRD9 1551 aa25.25■■□□□ 1.63
RBFOX1-211ENST00000548749 SPEF2Q9C093 1822 aa25.24■■□□□ 1.63
RBFOX1-211ENST00000548749 ALDH1L1O75891 902 aa25.24■■□□□ 1.63
RBFOX1-211ENST00000548749 CT47B1P0C2W7 299 aaPredicted RBP25.24■■□□□ 1.63
RBFOX1-211ENST00000548749 C6orf229H3BNL8 230 aa25.23■■□□□ 1.63
RBFOX1-211ENST00000548749 KIAA2012Q0VF49 1180 aa25.23■■□□□ 1.63
RBFOX1-211ENST00000548749 C9orf78Q9NZ63 289 aaPredicted RBP25.23■■□□□ 1.63
RBFOX1-211ENST00000548749 GJA3Q9Y6H8 435 aa25.23■■□□□ 1.63
RBFOX1-211ENST00000548749 RTL9Q8NET4 1388 aa25.22■■□□□ 1.63
RBFOX1-211ENST00000548749 GRM8O00222 908 aa25.22■■□□□ 1.63
RBFOX1-211ENST00000548749 ANKIB1Q9P2G1 1089 aa25.22■■□□□ 1.63
RBFOX1-211ENST00000548749 FAM161AQ3B820 660 aa25.21■■□□□ 1.63
RBFOX1-211ENST00000548749 GPC2Q8N158 579 aa25.21■■□□□ 1.63
RBFOX1-211ENST00000548749 L3MBTL3Q96JM7 780 aaPredicted RBP25.21■■□□□ 1.63
RBFOX1-211ENST00000548749 POLLQ9UGP5 575 aa25.21■■□□□ 1.63
RBFOX1-211ENST00000548749 LTBP1Q14766 1721 aa25.2■■□□□ 1.63
RBFOX1-211ENST00000548749 IQCA1LA6NCM1 817 aa25.2■■□□□ 1.62
RBFOX1-211ENST00000548749 RIMBP2O15034 1052 aa25.2■■□□□ 1.62
RBFOX1-211ENST00000548749 ITGA6P23229 1130 aa25.2■■□□□ 1.62
RBFOX1-211ENST00000548749 WASHC4Q2M389 1173 aa25.2■■□□□ 1.62
RBFOX1-211ENST00000548749 ZNRF3Q9ULT6 936 aa25.2■■□□□ 1.62
RBFOX1-211ENST00000548749 CHMP3Q9Y3E7 222 aa25.2■■□□□ 1.62
RBFOX1-211ENST00000548749 SCN4AP35499 1836 aa25.19■■□□□ 1.62
RBFOX1-211ENST00000548749 CSF1RP07333 972 aa25.19■■□□□ 1.62
RBFOX1-211ENST00000548749 TBC1D16Q8TBP0 767 aa25.19■■□□□ 1.62
RBFOX1-211ENST00000548749 GPR101Q96P66 508 aaPredicted RBP25.19■■□□□ 1.62
RBFOX1-211ENST00000548749 UFL1O94874 794 aa25.18■■□□□ 1.62
RBFOX1-211ENST00000548749 IGHMBP2P38935 993 aaKnown RBP25.18■■□□□ 1.62
RBFOX1-211ENST00000548749 FOXO4P98177 505 aa25.18■■□□□ 1.62
RBFOX1-211ENST00000548749 SMC1BQ8NDV3 1235 aa25.18■■□□□ 1.62
RBFOX1-211ENST00000548749 EYA3Q99504 573 aa25.18■■□□□ 1.62
RBFOX1-211ENST00000548749 PODXL2Q9NZ53 605 aa25.18■■□□□ 1.62
RBFOX1-211ENST00000548749 GGA1Q9UJY5 639 aa25.18■■□□□ 1.62
RBFOX1-211ENST00000548749 HSPA6P17066 643 aa25.17■■□□□ 1.62
RBFOX1-211ENST00000548749 FSTL1Q12841 308 aa25.17■■□□□ 1.62
RBFOX1-211ENST00000548749 BSDC1Q9NW68 430 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms