RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 GRAPLQ8TC17 118 aaPredicted RBP14.64□□□□□ -0.07
BEST3-209ENST00000548658 FAM89AQ96GI7 184 aa14.64□□□□□ -0.07
BEST3-209ENST00000548658 SNED1Q8TER0 1413 aa14.64□□□□□ -0.07
BEST3-209ENST00000548658 EIF6P56537 245 aaKnown RBP14.63□□□□□ -0.07
BEST3-209ENST00000548658 GPC2Q8N158 579 aa14.63□□□□□ -0.07
BEST3-209ENST00000548658 LARGE2Q8N3Y3 721 aa14.63□□□□□ -0.07
BEST3-209ENST00000548658 METTL22Q9BUU2 404 aaPredicted RBP14.63□□□□□ -0.07
BEST3-209ENST00000548658 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
BEST3-209ENST00000548658 CEP350Q5VT06 3117 aa14.63□□□□□ -0.07
BEST3-209ENST00000548658 IRS4O14654 1257 aaPredicted RBP14.62□□□□□ -0.07
BEST3-209ENST00000548658 NEXNQ0ZGT2 675 aa14.62□□□□□ -0.07
BEST3-209ENST00000548658 DPP8Q6V1X1 898 aaPredicted RBP14.62□□□□□ -0.07
BEST3-209ENST00000548658 KSR2Q6VAB6 950 aa14.62□□□□□ -0.07
BEST3-209ENST00000548658 FAM9BQ8IZU0 186 aa14.62□□□□□ -0.07
BEST3-209ENST00000548658 MPNDQ8N594 471 aa14.62□□□□□ -0.07
BEST3-209ENST00000548658 MYD88Q99836 296 aa14.62□□□□□ -0.07
BEST3-209ENST00000548658 CWC25Q9NXE8 425 aaPredicted RBP14.62□□□□□ -0.07
BEST3-209ENST00000548658 PNMA8AQ86V59 439 aaPredicted RBP14.61□□□□□ -0.07
BEST3-209ENST00000548658 NIM1KQ8IY84 436 aa14.61□□□□□ -0.07
BEST3-209ENST00000548658 RTFDC1Q9BY42 306 aaPredicted RBP14.61□□□□□ -0.07
BEST3-209ENST00000548658 HACL1Q9UJ83 578 aa14.61□□□□□ -0.07
BEST3-209ENST00000548658 SCN4AP35499 1836 aa14.6□□□□□ -0.07
BEST3-209ENST00000548658 PI4KAP2A4QPH2 592 aa14.6□□□□□ -0.07
BEST3-209ENST00000548658 PPIP5K2O43314 1243 aa14.6□□□□□ -0.07
BEST3-209ENST00000548658 PCCAP05165 728 aaPredicted RBP14.6□□□□□ -0.07
BEST3-209ENST00000548658 RTL5Q5HYW3 569 aaPredicted RBP14.6□□□□□ -0.07
BEST3-209ENST00000548658 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
BEST3-209ENST00000548658 PI4KAP1Q8N8J0 262 aa14.6□□□□□ -0.07
BEST3-209ENST00000548658 TAF1DQ9H5J8 278 aaPredicted RBP14.6□□□□□ -0.07
BEST3-209ENST00000548658 MYH16Q9H6N6 1097 aa14.6□□□□□ -0.07
BEST3-209ENST00000548658 MAP3K2Q9Y2U5 619 aa14.6□□□□□ -0.07
BEST3-209ENST00000548658 SALL2Q9Y467 1007 aaPredicted RBP14.6□□□□□ -0.07
BEST3-209ENST00000548658 ZNF541Q9H0D2 1346 aa14.6□□□□□ -0.07
BEST3-209ENST00000548658 LDHDQ86WU2 507 aa14.59□□□□□ -0.07
BEST3-209ENST00000548658 DNAJC5GQ8N7S2 189 aa14.59□□□□□ -0.07
BEST3-209ENST00000548658 FANCIQ9NVI1 1328 aa14.59□□□□□ -0.07
BEST3-209ENST00000548658 PDE8AO60658 829 aa14.58□□□□□ -0.08
BEST3-209ENST00000548658 CAPN15O75808 1086 aa14.58□□□□□ -0.08
BEST3-209ENST00000548658 LMOD1P29536 600 aaPredicted RBP14.58□□□□□ -0.08
BEST3-209ENST00000548658 EPHX2P34913 555 aa14.58□□□□□ -0.08
BEST3-209ENST00000548658 RPS8P62241 208 aaKnown RBP14.58□□□□□ -0.08
BEST3-209ENST00000548658 CCDC152Q4G0S7 254 aa14.58□□□□□ -0.08
BEST3-209ENST00000548658 ZNF428Q96B54 188 aa14.58□□□□□ -0.08
BEST3-209ENST00000548658 ZNRF3Q9ULT6 936 aa14.58□□□□□ -0.08
BEST3-209ENST00000548658 LAMB2P55268 1798 aa14.57□□□□□ -0.08
BEST3-209ENST00000548658 VAMP4O75379 141 aa14.57□□□□□ -0.08
BEST3-209ENST00000548658 KIAA2012Q0VF49 1180 aa14.57□□□□□ -0.08
BEST3-209ENST00000548658 AOC3Q16853 763 aa14.57□□□□□ -0.08
BEST3-209ENST00000548658 CELF1Q92879 486 aaKnown RBP14.57□□□□□ -0.08
BEST3-209ENST00000548658 NSFL1CQ9UNZ2 370 aaKnown RBP14.57□□□□□ -0.08
BEST3-209ENST00000548658 GJA3Q9Y6H8 435 aa14.57□□□□□ -0.08
BEST3-209ENST00000548658 EAPPQ56P03 285 aaPredicted RBP14.56□□□□□ -0.08
BEST3-209ENST00000548658 KLRG1Q96E93 195 aa14.56□□□□□ -0.08
BEST3-209ENST00000548658 CDHR2Q9BYE9 1310 aa14.56□□□□□ -0.08
BEST3-209ENST00000548658 DDX60Q8IY21 1712 aaKnown RBP14.55□□□□□ -0.08
BEST3-209ENST00000548658 CACNA1FO60840 1977 aa14.55□□□□□ -0.08
BEST3-209ENST00000548658 EXOSC9Q06265 439 aaKnown RBP14.55□□□□□ -0.08
BEST3-209ENST00000548658 FLIIQ13045 1269 aa14.55□□□□□ -0.08
BEST3-209ENST00000548658 FKBP5Q13451 457 aaPredicted RBP14.55□□□□□ -0.08
BEST3-209ENST00000548658 TNIP1Q15025 636 aa14.55□□□□□ -0.08
BEST3-209ENST00000548658 WASHC4Q2M389 1173 aa14.55□□□□□ -0.08
BEST3-209ENST00000548658 EYA3Q99504 573 aa14.55□□□□□ -0.08
BEST3-209ENST00000548658 CLEC11AQ9Y240 323 aa14.55□□□□□ -0.08
BEST3-209ENST00000548658 IGKV5-2P06315 115 aa14.54□□□□□ -0.08
BEST3-209ENST00000548658 G2E3Q7L622 706 aa14.54□□□□□ -0.08
BEST3-209ENST00000548658 NEURL1BA8MQ27 555 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 C6orf229H3BNL8 230 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 POTEIP0CG38 1075 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 POTEJP0CG39 1038 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 CXCL9Q07325 125 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 CIAPIN1Q6FI81 312 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 USP50Q70EL3 339 aaPredicted RBP14.53□□□□□ -0.08
BEST3-209ENST00000548658 LINS1Q8NG48 757 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 DNAAF4Q8WXU2 420 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 CDC5LQ99459 802 aaKnown RBP14.53□□□□□ -0.08
BEST3-209ENST00000548658 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 PODXL2Q9NZ53 605 aa14.53□□□□□ -0.08
BEST3-209ENST00000548658 SCNN1DP51172 638 aa14.52□□□□□ -0.09
BEST3-209ENST00000548658 CTSWP56202 376 aa14.52□□□□□ -0.09
BEST3-209ENST00000548658 HTRA3P83110 453 aa14.52□□□□□ -0.09
BEST3-209ENST00000548658 CWF19L2Q2TBE0 894 aaKnown RBP14.52□□□□□ -0.09
BEST3-209ENST00000548658 SLC51AQ86UW1 340 aa14.52□□□□□ -0.09
BEST3-209ENST00000548658 ANKRD18AQ8IVF6 992 aa14.52□□□□□ -0.09
BEST3-209ENST00000548658 SEC31BQ9NQW1 1179 aa14.52□□□□□ -0.09
BEST3-209ENST00000548658 ANKIB1Q9P2G1 1089 aa14.52□□□□□ -0.09
BEST3-209ENST00000548658 COL4A5P29400 1685 aa14.52□□□□□ -0.09
BEST3-209ENST00000548658 TAF1P21675 1872 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 H7C1W4 665 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 GPSM2P81274 684 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 GCKRQ14397 625 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 CNTROBQ8N137 903 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 JMYQ8N9B5 988 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 TTLL11Q8NHH1 800 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 JARID2Q92833 1246 aaPredicted RBP14.51□□□□□ -0.09
BEST3-209ENST00000548658 BCL2L13Q9BXK5 485 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 ZC3H12CQ9C0D7 883 aaKnown RBP14.51□□□□□ -0.09
BEST3-209ENST00000548658 GPRC5DQ9NZD1 345 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 POLLQ9UGP5 575 aa14.51□□□□□ -0.09
BEST3-209ENST00000548658 LRRC37AA6NMS7 1700 aa14.5□□□□□ -0.09
BEST3-209ENST00000548658 PASKQ96RG2 1323 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms