RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TMPOP42166 694 aaKnown RBP15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 GMPSP49915 693 aaPredicted RBP15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 DDX46Q7L014 1031 aaKnown RBP15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 NLRP10Q86W26 655 aa15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 SP8Q8IXZ3 490 aa15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 BEGAINQ9BUH8 593 aa15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 GLIS2Q9BZE0 524 aaPredicted RBP15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 ADARB2Q9NS39 739 aaKnown RBP15.67■□□□□ 0.1
TRAFD1-205ENST00000548277 SHTN1A0MZ66 631 aa15.66■□□□□ 0.1
TRAFD1-205ENST00000548277 BBOX1O75936 387 aa15.66■□□□□ 0.1
TRAFD1-205ENST00000548277 CELF2O95319 508 aaKnown RBP15.66■□□□□ 0.1
TRAFD1-205ENST00000548277 ECE1P42892 770 aa15.66■□□□□ 0.1
TRAFD1-205ENST00000548277 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
TRAFD1-205ENST00000548277 CIAPIN1Q6FI81 312 aa15.66■□□□□ 0.1
TRAFD1-205ENST00000548277 TCIRG1Q13488 830 aa15.65■□□□□ 0.1
TRAFD1-205ENST00000548277 HSP90AB3PQ58FF7 597 aa15.65■□□□□ 0.1
TRAFD1-205ENST00000548277 ABHD8Q96I13 439 aa15.65■□□□□ 0.1
TRAFD1-205ENST00000548277 TLL2Q9Y6L7 1015 aa15.65■□□□□ 0.1
TRAFD1-205ENST00000548277 RIMBP2O15034 1052 aa15.64■□□□□ 0.09
TRAFD1-205ENST00000548277 HIRAP54198 1017 aaPredicted RBP15.64■□□□□ 0.09
TRAFD1-205ENST00000548277 GRAPQ13588 217 aa15.64■□□□□ 0.09
TRAFD1-205ENST00000548277 DLK2Q6UY11 383 aa15.64■□□□□ 0.09
TRAFD1-205ENST00000548277 GRAPLQ8TC17 118 aaPredicted RBP15.64■□□□□ 0.09
TRAFD1-205ENST00000548277 RTFDC1Q9BY42 306 aaPredicted RBP15.64■□□□□ 0.09
TRAFD1-205ENST00000548277 VPS33BQ9H267 617 aa15.64■□□□□ 0.09
TRAFD1-205ENST00000548277 CNOT7Q9UIV1 285 aaKnown RBP15.64■□□□□ 0.09
TRAFD1-205ENST00000548277 DDX60Q8IY21 1712 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 CCDC85CA6NKD9 419 aa15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 ATP5J2-PTCD1G3V325 749 aa15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 KIAA2012Q0VF49 1180 aa15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 TNIP1Q15025 636 aa15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 TRPM4Q8TD43 1214 aa15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 CHPF2Q9P2E5 772 aa15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 SH3TC1Q8TE82 1336 aa15.63■□□□□ 0.09
TRAFD1-205ENST00000548277 YDJCA8MPS7 323 aa15.62■□□□□ 0.09
TRAFD1-205ENST00000548277 LMOD3Q0VAK6 560 aa15.62■□□□□ 0.09
TRAFD1-205ENST00000548277 FAM89AQ96GI7 184 aa15.62■□□□□ 0.09
TRAFD1-205ENST00000548277 NSFL1CQ9UNZ2 370 aaKnown RBP15.62■□□□□ 0.09
TRAFD1-205ENST00000548277 RBM26Q5T8P6 1007 aaKnown RBP15.61■□□□□ 0.09
TRAFD1-205ENST00000548277 SAPCD2Q86UD0 394 aa15.61■□□□□ 0.09
TRAFD1-205ENST00000548277 USP48Q86UV5 1035 aa15.61■□□□□ 0.09
TRAFD1-205ENST00000548277 CELF1Q92879 486 aaKnown RBP15.61■□□□□ 0.09
TRAFD1-205ENST00000548277 DBNDD1Q9H9R9 158 aa15.61■□□□□ 0.09
TRAFD1-205ENST00000548277 BABAM1Q9NWV8 329 aa15.61■□□□□ 0.09
TRAFD1-205ENST00000548277 C6orf229H3BNL8 230 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 H7C1D1 291 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 DDX10Q13206 875 aaKnown RBP15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 DOK7Q18PE1 504 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 WASHC4Q2M389 1173 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 HDGFL1Q5TGJ6 251 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 SAMD7Q7Z3H4 446 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 MICALL2Q8IY33 904 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 CFAP44Q96MT7 982 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 KCNQ5Q9NR82 932 aa15.6■□□□□ 0.09
TRAFD1-205ENST00000548277 PSMD14O00487 310 aa15.59■□□□□ 0.09
TRAFD1-205ENST00000548277 CHL1O00533 1208 aa15.59■□□□□ 0.09
TRAFD1-205ENST00000548277 RALBP1Q15311 655 aa15.59■□□□□ 0.09
TRAFD1-205ENST00000548277 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
TRAFD1-205ENST00000548277 TBC1D10BQ4KMP7 808 aaPredicted RBP15.59■□□□□ 0.09
TRAFD1-205ENST00000548277 ANKRD13DQ6ZTN6 518 aa15.59■□□□□ 0.09
TRAFD1-205ENST00000548277 CDC37L1Q7L3B6 337 aa15.59■□□□□ 0.09
TRAFD1-205ENST00000548277 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
TRAFD1-205ENST00000548277 COL4A1P02462 1669 aa15.58■□□□□ 0.08
TRAFD1-205ENST00000548277 MAP2K2P36507 400 aa15.58■□□□□ 0.08
TRAFD1-205ENST00000548277 GPSM2P81274 684 aa15.58■□□□□ 0.08
TRAFD1-205ENST00000548277 PLBD2Q8NHP8 589 aa15.58■□□□□ 0.08
TRAFD1-205ENST00000548277 THSD7BQ9C0I4 1608 aa15.57■□□□□ 0.08
TRAFD1-205ENST00000548277 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAFD1-205ENST00000548277 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
TRAFD1-205ENST00000548277 RUNDC1Q96C34 613 aa15.57■□□□□ 0.08
TRAFD1-205ENST00000548277 ZIC5Q96T25 663 aa15.57■□□□□ 0.08
TRAFD1-205ENST00000548277 POLLQ9UGP5 575 aa15.57■□□□□ 0.08
TRAFD1-205ENST00000548277 PGAP2Q9UHJ9 254 aa15.57■□□□□ 0.08
TRAFD1-205ENST00000548277 DUOX1Q9NRD9 1551 aa15.57■□□□□ 0.08
TRAFD1-205ENST00000548277 ELL2O00472 640 aaPredicted RBP15.56■□□□□ 0.08
TRAFD1-205ENST00000548277 EGFRP00533 1210 aa15.56■□□□□ 0.08
TRAFD1-205ENST00000548277 ZC3H15Q8WU90 426 aaKnown RBP15.56■□□□□ 0.08
TRAFD1-205ENST00000548277 ISCA1Q9BUE6 129 aa15.56■□□□□ 0.08
TRAFD1-205ENST00000548277 LRRC37AA6NMS7 1700 aa15.56■□□□□ 0.08
TRAFD1-205ENST00000548277 AKAP11Q9UKA4 1901 aa15.56■□□□□ 0.08
TRAFD1-205ENST00000548277 SCN9AQ15858 1988 aa15.56■□□□□ 0.08
TRAFD1-205ENST00000548277 G3V3G9 751 aa15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 IRS4O14654 1257 aaPredicted RBP15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 ECE2O60344 883 aa15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 HUNKP57058 714 aa15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 DCAF8Q5TAQ9 597 aa15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 DUSP27Q5VZP5 1158 aa15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 RIC3Q7Z5B4 369 aa15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 CCDC85AQ96PX6 553 aaPredicted RBP15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 DBF4Q9UBU7 674 aaPredicted RBP15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 ADAMTS8Q9UP79 889 aa15.55■□□□□ 0.08
TRAFD1-205ENST00000548277 MYBBP1AQ9BQG0 1328 aaKnown RBP15.54■□□□□ 0.08
TRAFD1-205ENST00000548277 ADM5C9JUS6 153 aa15.54■□□□□ 0.08
TRAFD1-205ENST00000548277 SF3B3Q15393 1217 aaKnown RBP15.54■□□□□ 0.08
TRAFD1-205ENST00000548277 KRT26Q7Z3Y9 468 aa15.54■□□□□ 0.08
TRAFD1-205ENST00000548277 TMC4Q7Z404 712 aa15.54■□□□□ 0.08
TRAFD1-205ENST00000548277 PHAXQ9H814 394 aaKnown RBP15.54■□□□□ 0.08
TRAFD1-205ENST00000548277 SEC31BQ9NQW1 1179 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms