RNA–Protein interactions for RNA: ENST00000548221.5

NCKAP1L-204, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 3,559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-204ENST00000548221 STK3Q13188 491 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 HSP90B2PQ58FF3 399 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 RUFY3Q7L099 469 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 CCDC91Q7Z6B0 441 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 MICALL1Q8N3F8 863 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 PI4KAP1Q8N8J0 262 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 SCAND2PQ9GZW5 306 aaPredicted RBP6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 PHAXQ9H814 394 aaKnown RBP6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 STRN4Q9NRL3 753 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 ORC3Q9UBD5 711 aaPredicted RBP6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 UNC13BO14795 1591 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 LAMC1P11047 1609 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 NR1I2O75469 434 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 LARGE1O95461 756 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 EVA1CP58658 441 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 NEXNQ0ZGT2 675 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 SLC39A6Q13433 755 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 PACS2Q86VP3 889 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 DNAAF4Q8WXU2 420 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 CCDC102AQ96A19 550 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 PLEKHA4Q9H4M7 779 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 FAM53CQ9NYF3 392 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 RTL1A6NKG5 1358 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 H3BQV1 296 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 TDO2P48775 406 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 GSDMDP57764 484 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 IFFO2Q5TF58 517 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 CDC37L1Q7L3B6 337 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 AOPEPQ8N6M6 819 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 NFATC2IPQ8NCF5 419 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 ERCC4Q92889 916 aaPredicted RBP6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 ZNF622Q969S3 477 aaKnown RBP eCLIP6.78□□□□□ -1.322e-6■□□□□ 9.2
NCKAP1L-204ENST00000548221 PPP1R13BQ96KQ4 1090 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 NEUROD6Q96NK8 337 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 CCDC85AQ96PX6 553 aaPredicted RBP6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 CLSTN2Q9H4D0 955 aa6.78□□□□□ -1.32
NCKAP1L-204ENST00000548221 ELP1O95163 1332 aa6.77□□□□□ -1.32
NCKAP1L-204ENST00000548221 NPHP3Q7Z494 1330 aa6.77□□□□□ -1.32
NCKAP1L-204ENST00000548221 MLH3Q9UHC1 1453 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 EIF3CLB5ME19 914 aaKnown RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 PSEN1P49768 467 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CT47A1Q5JQC4 288 aaPredicted RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CCDC73Q6ZRK6 1079 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 UNC5CLQ8IV45 518 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CEP57L1Q8IYX8 460 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CLASRPQ8N2M8 674 aaKnown RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 ANKRD20A12PQ8NF67 263 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 DDX17Q92841 729 aaKnown RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 GPATCH3Q96I76 525 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 ORAI2Q96SN7 254 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 EIF3CQ99613 913 aaKnown RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 LGR6Q9HBX8 967 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CEP83Q9Y592 693 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CYP46A1Q9Y6A2 500 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 SRCAPQ6ZRS2 3230 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 KINO60870 393 aaKnown RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 PTCD1O75127 700 aaKnown RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 TPM1P09493 284 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CCDC172P0C7W6 258 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 PDCP20941 246 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 MAP2K2P36507 400 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 MAGEA9P43362 315 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CCZ1BP86790 482 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CCZ1P86791 482 aaPredicted RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 C11orf57Q6ZUT1 292 aaPredicted RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 RASEFQ8IZ41 740 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 MRFAP1L1Q96HT8 127 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 TCEANC2Q96MN5 208 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 SDF4Q9BRK5 362 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 SNX14Q9Y5W7 946 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 HSP90B1P14625 803 aaKnown RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 ATP2B1P20020 1258 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 IBSPP21815 317 aaPredicted RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 HSPA4P34932 840 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 BRPF1P55201 1214 aaPredicted RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 STX1AQ16623 288 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 PRPF40BQ6NWY9 871 aaKnown RBP6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 FAM212AQ96EL1 285 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 CHPF2Q9P2E5 772 aa6.77□□□□□ -1.33
NCKAP1L-204ENST00000548221 MYOM2P54296 1465 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 MSH6P52701 1360 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 CHL1O00533 1208 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 ISM2Q6H9L7 571 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 PPP1R42Q7Z4L9 355 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 HOMEZQ8IX15 550 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 EXOC4Q96A65 974 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 ERBB3P21860 1342 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 MED14O60244 1454 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 KCNQ3O43525 872 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 SASH3O75995 380 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 DDX58O95786 925 aaKnown RBP6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 ZKSCAN1P17029 563 aaPredicted RBP6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 ETF1P62495 437 aaKnown RBP6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 NAT10Q9H0A0 1025 aaKnown RBP6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 CCDC8Q9H0W5 538 aaPredicted RBP6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 CXorf56Q9H5V9 222 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 MADDQ8WXG6 1647 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 ABCC3O15438 1527 aa6.76□□□□□ -1.33
NCKAP1L-204ENST00000548221 EFCAB6Q5THR3 1501 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms