RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 ZNF277Q9NRM2 450 aaPredicted RBP10.16□□□□□ -0.78
PRIM1-203ENST00000548173 DDX60Q8IY21 1712 aaKnown RBP10.16□□□□□ -0.78
PRIM1-203ENST00000548173 IRS4O14654 1257 aaPredicted RBP10.15□□□□□ -0.78
PRIM1-203ENST00000548173 BBOX1O75936 387 aa10.15□□□□□ -0.78
PRIM1-203ENST00000548173 TOMM70O94826 608 aa10.15□□□□□ -0.78
PRIM1-203ENST00000548173 PCCAP05165 728 aaPredicted RBP10.15□□□□□ -0.78
PRIM1-203ENST00000548173 IGKV5-2P06315 115 aa10.15□□□□□ -0.78
PRIM1-203ENST00000548173 FLIIQ13045 1269 aa10.15□□□□□ -0.78
PRIM1-203ENST00000548173 DPY19L2Q6NUT2 758 aa10.15□□□□□ -0.78
PRIM1-203ENST00000548173 DDX46Q7L014 1031 aaKnown RBP10.15□□□□□ -0.78
PRIM1-203ENST00000548173 CWC25Q9NXE8 425 aaPredicted RBP10.15□□□□□ -0.78
PRIM1-203ENST00000548173 ATP6V0A2Q9Y487 856 aa10.15□□□□□ -0.78
PRIM1-203ENST00000548173 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
PRIM1-203ENST00000548173 IARSP41252 1262 aaKnown RBP10.14□□□□□ -0.79
PRIM1-203ENST00000548173 GRAPQ13588 217 aa10.14□□□□□ -0.79
PRIM1-203ENST00000548173 SP8Q8IXZ3 490 aa10.14□□□□□ -0.79
PRIM1-203ENST00000548173 GRAPLQ8TC17 118 aaPredicted RBP10.14□□□□□ -0.79
PRIM1-203ENST00000548173 POTECB2RU33 542 aa10.13□□□□□ -0.79
PRIM1-203ENST00000548173 HSP90B1P14625 803 aaKnown RBP10.13□□□□□ -0.79
PRIM1-203ENST00000548173 VEGFAP15692 232 aaPredicted RBP10.13□□□□□ -0.79
PRIM1-203ENST00000548173 NEXNQ0ZGT2 675 aa10.13□□□□□ -0.79
PRIM1-203ENST00000548173 CWF19L2Q2TBE0 894 aaKnown RBP10.13□□□□□ -0.79
PRIM1-203ENST00000548173 TAF1P21675 1872 aa10.13□□□□□ -0.79
PRIM1-203ENST00000548173 CDHR2Q9BYE9 1310 aa10.12□□□□□ -0.79
PRIM1-203ENST00000548173 NEURL1BA8MQ27 555 aa10.12□□□□□ -0.79
PRIM1-203ENST00000548173 E9PSI1 815 aa10.12□□□□□ -0.79
PRIM1-203ENST00000548173 FZD9O00144 591 aa10.12□□□□□ -0.79
PRIM1-203ENST00000548173 PDE8AO60658 829 aa10.12□□□□□ -0.79
PRIM1-203ENST00000548173 DDNO94850 711 aaPredicted RBP10.12□□□□□ -0.79
PRIM1-203ENST00000548173 FKBP5Q13451 457 aaPredicted RBP10.12□□□□□ -0.79
PRIM1-203ENST00000548173 TMC4Q7Z404 712 aa10.12□□□□□ -0.79
PRIM1-203ENST00000548173 C16orf71Q8IYS4 520 aaPredicted RBP10.12□□□□□ -0.79
PRIM1-203ENST00000548173 RBM46Q8TBY0 533 aaKnown RBP10.12□□□□□ -0.79
PRIM1-203ENST00000548173 DNAAF4Q8WXU2 420 aa10.12□□□□□ -0.79
PRIM1-203ENST00000548173 JARID2Q92833 1246 aaPredicted RBP10.12□□□□□ -0.79
PRIM1-203ENST00000548173 CELF1Q92879 486 aaKnown RBP10.12□□□□□ -0.79
PRIM1-203ENST00000548173 RTFDC1Q9BY42 306 aaPredicted RBP10.12□□□□□ -0.79
PRIM1-203ENST00000548173 TMX4Q9H1E5 349 aaPredicted RBP10.12□□□□□ -0.79
PRIM1-203ENST00000548173 WDR90Q96KV7 1748 aa10.12□□□□□ -0.79
PRIM1-203ENST00000548173 ZNF541Q9H0D2 1346 aa10.11□□□□□ -0.79
PRIM1-203ENST00000548173 H7C1W4 665 aa10.11□□□□□ -0.79
PRIM1-203ENST00000548173 RPS8P62241 208 aaKnown RBP10.11□□□□□ -0.79
PRIM1-203ENST00000548173 SLFN5Q08AF3 891 aa10.11□□□□□ -0.79
PRIM1-203ENST00000548173 MPNDQ8N594 471 aa10.11□□□□□ -0.79
PRIM1-203ENST00000548173 JDP2Q8WYK2 163 aa10.11□□□□□ -0.79
PRIM1-203ENST00000548173 VPS33BQ9H267 617 aa10.11□□□□□ -0.79
PRIM1-203ENST00000548173 COL4A5P29400 1685 aa10.11□□□□□ -0.79
PRIM1-203ENST00000548173 COL4A1P02462 1669 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 HSPA6P17066 643 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 GCKRQ14397 625 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 CCDC152Q4G0S7 254 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 DIEXFQ68CQ4 756 aaKnown RBP10.1□□□□□ -0.79
PRIM1-203ENST00000548173 DPP8Q6V1X1 898 aaPredicted RBP10.1□□□□□ -0.79
PRIM1-203ENST00000548173 LARGE2Q8N3Y3 721 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 SUPT20HQ8NEM7 779 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 LINS1Q8NG48 757 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 CDCA7LQ96GN5 454 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 L3MBTL3Q96JM7 780 aaPredicted RBP10.1□□□□□ -0.79
PRIM1-203ENST00000548173 SEC31BQ9NQW1 1179 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 LRRC37AA6NMS7 1700 aa10.1□□□□□ -0.79
PRIM1-203ENST00000548173 F6X3S4 739 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 ZBTB22O15209 634 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 PPIP5K2O43314 1243 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 CASP7P55210 303 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 CTSWP56202 376 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 FSTL1Q12841 308 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 AOC3Q16853 763 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 BEND3Q5T5X7 828 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 UBE3BQ7Z3V4 1068 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 TRMT2AQ8IZ69 625 aaKnown RBP10.09□□□□□ -0.79
PRIM1-203ENST00000548173 MIER1Q8N108 512 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 TTLL11Q8NHH1 800 aa10.09□□□□□ -0.79
PRIM1-203ENST00000548173 IQCA1LA6NCM1 817 aa10.08□□□□□ -0.8
PRIM1-203ENST00000548173 EIF6P56537 245 aaKnown RBP10.08□□□□□ -0.8
PRIM1-203ENST00000548173 KIAA2012Q0VF49 1180 aa10.08□□□□□ -0.8
PRIM1-203ENST00000548173 NIM1KQ8IY84 436 aa10.08□□□□□ -0.8
PRIM1-203ENST00000548173 GPC2Q8N158 579 aa10.08□□□□□ -0.8
PRIM1-203ENST00000548173 SMC1BQ8NDV3 1235 aa10.08□□□□□ -0.8
PRIM1-203ENST00000548173 CCDC85AQ96PX6 553 aaPredicted RBP10.08□□□□□ -0.8
PRIM1-203ENST00000548173 PLA2G12BQ9BX93 195 aa10.08□□□□□ -0.8
PRIM1-203ENST00000548173 NSFL1CQ9UNZ2 370 aaKnown RBP10.08□□□□□ -0.8
PRIM1-203ENST00000548173 DUOX1Q9NRD9 1551 aa10.08□□□□□ -0.8
PRIM1-203ENST00000548173 RTL9Q8NET4 1388 aa10.07□□□□□ -0.8
PRIM1-203ENST00000548173 GPSM2P81274 684 aa10.07□□□□□ -0.8
PRIM1-203ENST00000548173 MRPL50Q8N5N7 158 aaKnown RBP10.07□□□□□ -0.8
PRIM1-203ENST00000548173 TAF1DQ9H5J8 278 aaPredicted RBP10.07□□□□□ -0.8
PRIM1-203ENST00000548173 PODXL2Q9NZ53 605 aa10.07□□□□□ -0.8
PRIM1-203ENST00000548173 ZNRF3Q9ULT6 936 aa10.07□□□□□ -0.8
PRIM1-203ENST00000548173 SCN4AP35499 1836 aa10.07□□□□□ -0.8
PRIM1-203ENST00000548173 MYH3P11055 1940 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 CSF1RP07333 972 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 POTEIP0CG38 1075 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 POTEJP0CG39 1038 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 CXCL9Q07325 125 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 ANKRD18AQ8IVF6 992 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 TBC1D16Q8TBP0 767 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 SSH1Q8WYL5 1049 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 CDC5LQ99459 802 aaKnown RBP10.06□□□□□ -0.8
PRIM1-203ENST00000548173 GREM2Q9H772 168 aa10.06□□□□□ -0.8
PRIM1-203ENST00000548173 POLLQ9UGP5 575 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms