RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 MRFAP1L1Q96HT8 127 aa16.78■□□□□ 0.28
RAPGEF3-216ENST00000547856 PLEKHG1Q9ULL1 1385 aa16.78■□□□□ 0.28
RAPGEF3-216ENST00000547856 SSH2Q76I76 1423 aa16.78■□□□□ 0.28
RAPGEF3-216ENST00000547856 PTPRUQ92729 1446 aa16.78■□□□□ 0.28
RAPGEF3-216ENST00000547856 ACEP12821 1306 aa16.77■□□□□ 0.28
RAPGEF3-216ENST00000547856 GNL2Q13823 731 aaKnown RBP16.77■□□□□ 0.28
RAPGEF3-216ENST00000547856 G2E3Q7L622 706 aa16.77■□□□□ 0.28
RAPGEF3-216ENST00000547856 REXO1L1PQ8IX06 675 aa16.77■□□□□ 0.28
RAPGEF3-216ENST00000547856 LEO1Q8WVC0 666 aaPredicted RBP16.77■□□□□ 0.28
RAPGEF3-216ENST00000547856 JRKLQ9Y4A0 524 aa16.77■□□□□ 0.28
RAPGEF3-216ENST00000547856 URI1O94763 535 aaPredicted RBP16.77■□□□□ 0.27
RAPGEF3-216ENST00000547856 IFIT2P09913 472 aaKnown RBP16.77■□□□□ 0.27
RAPGEF3-216ENST00000547856 PACS2Q86VP3 889 aa16.77■□□□□ 0.27
RAPGEF3-216ENST00000547856 FAM177A1Q8N128 213 aaPredicted RBP16.77■□□□□ 0.27
RAPGEF3-216ENST00000547856 KLHL34Q8N239 644 aa16.77■□□□□ 0.27
RAPGEF3-216ENST00000547856 FBXO18Q8NFZ0 1043 aa16.77■□□□□ 0.27
RAPGEF3-216ENST00000547856 PGBD1Q96JS3 809 aa16.77■□□□□ 0.27
RAPGEF3-216ENST00000547856 CARD6Q9BX69 1037 aa16.77■□□□□ 0.27
RAPGEF3-216ENST00000547856 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 KIF2AO00139 706 aaPredicted RBP16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 GOLGA6L1Q8N7Z2 621 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 TCEANC2Q96MN5 208 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 LSG1Q9H089 658 aaKnown RBP16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 MIS18AQ9NYP9 233 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 NRKQ7Z2Y5 1582 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 SGSM2O43147 1006 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 GNAI2P04899 355 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 E2F4Q16254 413 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 GOLGA5Q8TBA6 731 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 IL17RAQ96F46 866 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 AK7Q96M32 723 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 ADAM21Q9UKJ8 722 aa16.76■□□□□ 0.27
RAPGEF3-216ENST00000547856 GNAI3P08754 354 aa16.75■□□□□ 0.27
RAPGEF3-216ENST00000547856 PSEN1P49768 467 aa16.75■□□□□ 0.27
RAPGEF3-216ENST00000547856 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
RAPGEF3-216ENST00000547856 CTR9Q6PD62 1173 aa16.75■□□□□ 0.27
RAPGEF3-216ENST00000547856 FOXR1Q6PIV2 292 aa16.75■□□□□ 0.27
RAPGEF3-216ENST00000547856 MYCBPQ99417 103 aaPredicted RBP16.75■□□□□ 0.27
RAPGEF3-216ENST00000547856 KIAA0232Q92628 1395 aa16.75■□□□□ 0.27
RAPGEF3-216ENST00000547856 TTC21AQ8NDW8 1320 aa16.75■□□□□ 0.27
RAPGEF3-216ENST00000547856 STK3Q13188 491 aa16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 TTC31Q49AM3 519 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 RBM43Q6ZSC3 357 aaKnown RBP16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 MCM10Q7L590 875 aa16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 SCAND2PQ9GZW5 306 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 ELP1O95163 1332 aa16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 COL9A3Q14050 684 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 AOPEPQ8N6M6 819 aa16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 DDX11Q96FC9 970 aa16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 TPCN1Q9ULQ1 816 aa16.74■□□□□ 0.27
RAPGEF3-216ENST00000547856 A0A1B0GUL7 405 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 GUCY2CP25092 1073 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 EVCP57679 992 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 TMC6Q7Z403 805 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 EIF4A2Q14240 407 aaKnown RBP16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 SMC2O95347 1197 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 PTH1RQ03431 593 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 CC2D1AQ6P1N0 951 aaPredicted RBP16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 NCAPGQ9BPX3 1015 aa16.73■□□□□ 0.27
RAPGEF3-216ENST00000547856 OVOS2A0A0J9YW53 1432 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 OVOS2Q6IE36 1432 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 LMOD3Q0VAK6 560 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 DHX40Q8IX18 779 aaKnown RBP16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 USP6P35125 1406 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 MMP14P50281 582 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 SKIDA1Q1XH10 827 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 UBXN6Q9BZV1 441 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 STAP2Q9UGK3 403 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 AMOTL2Q9Y2J4 779 aa16.72■□□□□ 0.27
RAPGEF3-216ENST00000547856 H3BQF6 201 aa16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 ACTN2P35609 894 aa16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 STX1AQ16623 288 aa16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 NOM1Q5C9Z4 860 aaKnown RBP16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 LEKR1Q6ZMV7 388 aa16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 NBPF11Q86T75 865 aa16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 FMNL2Q96PY5 1086 aa16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 EID1Q9Y6B2 187 aa16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 PEAK1Q9H792 1746 aa16.71■□□□□ 0.27
RAPGEF3-216ENST00000547856 TADA3O75528 432 aa16.71■□□□□ 0.26
RAPGEF3-216ENST00000547856 FOSBP53539 338 aa16.71■□□□□ 0.26
RAPGEF3-216ENST00000547856 VPS53Q5VIR6 699 aa16.71■□□□□ 0.26
RAPGEF3-216ENST00000547856 SULT6B1Q6IMI4 303 aa16.71■□□□□ 0.26
RAPGEF3-216ENST00000547856 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.26
RAPGEF3-216ENST00000547856 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.26
RAPGEF3-216ENST00000547856 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
RAPGEF3-216ENST00000547856 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
RAPGEF3-216ENST00000547856 PLEKHA4Q9H4M7 779 aa16.7■□□□□ 0.26
RAPGEF3-216ENST00000547856 VPS18Q9P253 973 aa16.7■□□□□ 0.26
RAPGEF3-216ENST00000547856 RGPD8O14715 1765 aaPredicted RBP16.7■□□□□ 0.26
RAPGEF3-216ENST00000547856 SFPQP23246 707 aaKnown RBP eCLIP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms