RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 ARID4BQ4LE39 1312 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 PITPNM2Q9BZ72 1349 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 C8AP07357 584 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 YY1P25490 414 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 CTSWP56202 376 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 GRIPAP1Q4V328 841 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 LCE1AQ5T7P2 110 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 SH3RF1Q7Z6J0 888 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 ZC3H4Q9UPT8 1303 aaKnown RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 INSRP06213 1382 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 ANKARQ7Z5J8 1434 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 DHX57Q6P158 1386 aaKnown RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 SOBPA7XYQ1 873 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 J3QL48 77 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 GNB5O14775 395 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 VGFO15240 615 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 MAP2K3P46734 347 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 RAP1GAPP47736 663 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 BLOC1S3Q6QNY0 202 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 RIPOR1Q6ZS17 1223 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 BRINP3Q76B58 766 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 NGLY1Q96IV0 654 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 CRISPLD2Q9H0B8 497 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 TRPC5Q9UL62 973 aaPredicted RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 FCF1Q9Y324 198 aaKnown RBP0.71□□□□□ -2.3
CEP290-203ENST00000547691 TBX22Q9Y458 520 aa0.71□□□□□ -2.3
CEP290-203ENST00000547691 COL5A2P05997 1499 aaPredicted RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 FMNL1O95466 1100 aaPredicted RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 LTKP29376 864 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 WDR4P57081 412 aaKnown RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 ARID5BQ14865 1188 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 VPS72Q15906 364 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 PRSS36Q5K4E3 855 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 WHAMMQ8TF30 809 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 RELTQ969Z4 430 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 SLAIN2Q9P270 581 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 ATP1B4Q9UN42 357 aaPredicted RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 ZNF646O15015 1829 aaPredicted RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 PRRC2CQ9Y520 2896 aaKnown RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 TNS3Q68CZ2 1445 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 ATP10DQ9P241 1426 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 RIMS2Q9UQ26 1411 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 PLEKHD1A6NEE1 506 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 MAP3K7O43318 606 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 MICALL1Q8N3F8 863 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 LAMB2P55268 1798 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 MON2Q7Z3U7 1717 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 KCPQ6ZWJ8 1503 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 NSD3Q9BZ95 1437 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 FIGNL2A6NMB9 653 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 SPTLC1O15269 473 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 DYRK3O43781 588 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 HSPA6P17066 643 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 MX2P20592 715 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 SSTR3P32745 418 aaPredicted RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 MBIPQ9NS73 344 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 RAPGEFL1Q9UHV5 662 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 SCN4AP35499 1836 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 HUWE1Q7Z6Z7 4374 aaKnown RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 DOT1LQ8TEK3 1739 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 ZZEF1O43149 2961 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 H7C1W4 665 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 LMO1P25800 156 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 HMGA2P52926 109 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 PIP4K2BP78356 416 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 HNRNPA0Q13151 305 aaKnown RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 KRTAP4-3Q9BYR4 195 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 ESF1Q9H501 851 aaKnown RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 VPS13BQ7Z7G8 4022 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 SPATA31E1Q6ZUB1 1445 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 BUD31P41223 144 aaPredicted RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 APLP1P51693 650 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 RC3H1Q5TC82 1133 aaKnown RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 AFAP1Q8N556 730 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 TP53INP1Q96A56 240 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 FUBP1Q96AE4 644 aaKnown RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 GJD4Q96KN9 370 aaPredicted RBP0.7□□□□□ -2.3
CEP290-203ENST00000547691 MRGPRX2Q96LB1 330 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 ALMS1Q8TCU4 4167 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 SCN7AQ01118 1682 aa0.7□□□□□ -2.3
CEP290-203ENST00000547691 OVOL3O00110 214 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 KCNQ2O43526 872 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 TLL1O43897 1013 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 FECHP22830 423 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 AGERQ15109 404 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 TATDN2Q93075 761 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 LRRC59Q96AG4 307 aaKnown RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 VPS33BQ9H267 617 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 QTRT2Q9H974 415 aaKnown RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 PAPPA2Q9BXP8 1791 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 SCN11AQ9UI33 1791 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 KIAA0232Q92628 1395 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 KIF15Q9NS87 1388 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 FER1L6Q2WGJ9 1857 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 SPAG9O60271 1321 aaKnown RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 COL2A1P02458 1487 aaPredicted RBP0.69□□□□□ -2.3
CEP290-203ENST00000547691 KRBA1A5PL33 1030 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 ALAS2P22557 587 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 CADPS2Q86UW7 1296 aa0.69□□□□□ -2.3
CEP290-203ENST00000547691 SPOCK2Q92563 424 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms