RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 MAP3K2Q9Y2U5 619 aa15.9■□□□□ 0.14
SSH1-206ENST00000547381 DDX60Q8IY21 1712 aaKnown RBP15.89■□□□□ 0.13
SSH1-206ENST00000547381 PCCAP05165 728 aaPredicted RBP15.89■□□□□ 0.13
SSH1-206ENST00000547381 RTL5Q5HYW3 569 aaPredicted RBP15.89■□□□□ 0.13
SSH1-206ENST00000547381 DPP8Q6V1X1 898 aaPredicted RBP15.89■□□□□ 0.13
SSH1-206ENST00000547381 LARGE2Q8N3Y3 721 aa15.89■□□□□ 0.13
SSH1-206ENST00000547381 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
SSH1-206ENST00000547381 RTFDC1Q9BY42 306 aaPredicted RBP15.89■□□□□ 0.13
SSH1-206ENST00000547381 VAMP4O75379 141 aa15.88■□□□□ 0.13
SSH1-206ENST00000547381 EIF6P56537 245 aaKnown RBP15.88■□□□□ 0.13
SSH1-206ENST00000547381 EXOSC9Q06265 439 aaKnown RBP15.88■□□□□ 0.13
SSH1-206ENST00000547381 GPC2Q8N158 579 aa15.88■□□□□ 0.13
SSH1-206ENST00000547381 MPNDQ8N594 471 aa15.88■□□□□ 0.13
SSH1-206ENST00000547381 FLIIQ13045 1269 aa15.87■□□□□ 0.13
SSH1-206ENST00000547381 CACNA1FO60840 1977 aa15.87■□□□□ 0.13
SSH1-206ENST00000547381 ZNF541Q9H0D2 1346 aa15.87■□□□□ 0.13
SSH1-206ENST00000547381 PPIP5K2O43314 1243 aa15.86■□□□□ 0.13
SSH1-206ENST00000547381 PDE8AO60658 829 aa15.86■□□□□ 0.13
SSH1-206ENST00000547381 CCDC152Q4G0S7 254 aa15.86■□□□□ 0.13
SSH1-206ENST00000547381 G2E3Q7L622 706 aa15.86■□□□□ 0.13
SSH1-206ENST00000547381 NIM1KQ8IY84 436 aa15.86■□□□□ 0.13
SSH1-206ENST00000547381 PCNTO95613 3336 aa15.86■□□□□ 0.13
SSH1-206ENST00000547381 SCN4AP35499 1836 aa15.85■□□□□ 0.13
SSH1-206ENST00000547381 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
SSH1-206ENST00000547381 RPS8P62241 208 aaKnown RBP15.85■□□□□ 0.13
SSH1-206ENST00000547381 FKBP5Q13451 457 aaPredicted RBP15.85■□□□□ 0.13
SSH1-206ENST00000547381 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
SSH1-206ENST00000547381 CDHR2Q9BYE9 1310 aa15.85■□□□□ 0.13
SSH1-206ENST00000547381 NEURL1BA8MQ27 555 aa15.84■□□□□ 0.13
SSH1-206ENST00000547381 AOC3Q16853 763 aa15.84■□□□□ 0.13
SSH1-206ENST00000547381 SLC51AQ86UW1 340 aa15.84■□□□□ 0.13
SSH1-206ENST00000547381 CELF1Q92879 486 aaKnown RBP15.84■□□□□ 0.13
SSH1-206ENST00000547381 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
SSH1-206ENST00000547381 HACL1Q9UJ83 578 aa15.84■□□□□ 0.13
SSH1-206ENST00000547381 ZNF521Q96K83 1311 aa15.84■□□□□ 0.13
SSH1-206ENST00000547381 CCER2I3L3R5 266 aa15.83■□□□□ 0.12
SSH1-206ENST00000547381 KIAA2012Q0VF49 1180 aa15.83■□□□□ 0.12
SSH1-206ENST00000547381 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
SSH1-206ENST00000547381 ZNRF3Q9ULT6 936 aa15.83■□□□□ 0.12
SSH1-206ENST00000547381 GJA3Q9Y6H8 435 aa15.83■□□□□ 0.12
SSH1-206ENST00000547381 TAF1P21675 1872 aa15.82■□□□□ 0.12
SSH1-206ENST00000547381 CWF19L2Q2TBE0 894 aaKnown RBP15.82■□□□□ 0.12
SSH1-206ENST00000547381 PNMA8AQ86V59 439 aaPredicted RBP15.82■□□□□ 0.12
SSH1-206ENST00000547381 LDHDQ86WU2 507 aa15.82■□□□□ 0.12
SSH1-206ENST00000547381 DNAAF4Q8WXU2 420 aa15.82■□□□□ 0.12
SSH1-206ENST00000547381 NSFL1CQ9UNZ2 370 aaKnown RBP15.82■□□□□ 0.12
SSH1-206ENST00000547381 COL4A5P29400 1685 aa15.82■□□□□ 0.12
SSH1-206ENST00000547381 LRRC37AA6NMS7 1700 aa15.82■□□□□ 0.12
SSH1-206ENST00000547381 E9PSI1 815 aa15.81■□□□□ 0.12
SSH1-206ENST00000547381 H7C1W4 665 aa15.81■□□□□ 0.12
SSH1-206ENST00000547381 LMOD1P29536 600 aaPredicted RBP15.81■□□□□ 0.12
SSH1-206ENST00000547381 EPHX2P34913 555 aa15.81■□□□□ 0.12
SSH1-206ENST00000547381 CTSWP56202 376 aa15.81■□□□□ 0.12
SSH1-206ENST00000547381 GCKRQ14397 625 aa15.81■□□□□ 0.12
SSH1-206ENST00000547381 LINS1Q8NG48 757 aa15.81■□□□□ 0.12
SSH1-206ENST00000547381 JARID2Q92833 1246 aaPredicted RBP15.81■□□□□ 0.12
SSH1-206ENST00000547381 WASHC4Q2M389 1173 aa15.8■□□□□ 0.12
SSH1-206ENST00000547381 EYA3Q99504 573 aa15.8■□□□□ 0.12
SSH1-206ENST00000547381 SEC31BQ9NQW1 1179 aa15.8■□□□□ 0.12
SSH1-206ENST00000547381 C6orf229H3BNL8 230 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 GPSM2P81274 684 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 CXCL9Q07325 125 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 TNIP1Q15025 636 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 EAPPQ56P03 285 aaPredicted RBP15.79■□□□□ 0.12
SSH1-206ENST00000547381 UBE3BQ7Z3V4 1068 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 DNAJC5GQ8N7S2 189 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 TTLL11Q8NHH1 800 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 CDC5LQ99459 802 aaKnown RBP15.79■□□□□ 0.12
SSH1-206ENST00000547381 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
SSH1-206ENST00000547381 RTL9Q8NET4 1388 aa15.78■□□□□ 0.12
SSH1-206ENST00000547381 CCDC85AQ96PX6 553 aaPredicted RBP15.78■□□□□ 0.12
SSH1-206ENST00000547381 ANKIB1Q9P2G1 1089 aa15.78■□□□□ 0.12
SSH1-206ENST00000547381 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
SSH1-206ENST00000547381 POTEIP0CG38 1075 aa15.77■□□□□ 0.12
SSH1-206ENST00000547381 POTEJP0CG39 1038 aa15.77■□□□□ 0.12
SSH1-206ENST00000547381 SCNN1DP51172 638 aa15.77■□□□□ 0.12
SSH1-206ENST00000547381 CIAPIN1Q6FI81 312 aa15.77■□□□□ 0.12
SSH1-206ENST00000547381 TBC1D16Q8TBP0 767 aa15.77■□□□□ 0.12
SSH1-206ENST00000547381 PLA2G12BQ9BX93 195 aa15.77■□□□□ 0.12
SSH1-206ENST00000547381 ZC3H12CQ9C0D7 883 aaKnown RBP15.77■□□□□ 0.12
SSH1-206ENST00000547381 POLLQ9UGP5 575 aa15.77■□□□□ 0.12
SSH1-206ENST00000547381 DUOX1Q9NRD9 1551 aa15.77■□□□□ 0.11
SSH1-206ENST00000547381 SLFN5Q08AF3 891 aa15.76■□□□□ 0.11
SSH1-206ENST00000547381 GREM2Q9H772 168 aa15.76■□□□□ 0.11
SSH1-206ENST00000547381 GGA1Q9UJY5 639 aa15.76■□□□□ 0.11
SSH1-206ENST00000547381 MYH3P11055 1940 aa15.76■□□□□ 0.11
SSH1-206ENST00000547381 F6X3S4 739 aa15.75■□□□□ 0.11
SSH1-206ENST00000547381 RAD17O75943 681 aa15.75■□□□□ 0.11
SSH1-206ENST00000547381 UFL1O94874 794 aa15.75■□□□□ 0.11
SSH1-206ENST00000547381 CASP7P55210 303 aa15.75■□□□□ 0.11
SSH1-206ENST00000547381 HTRA3P83110 453 aa15.75■□□□□ 0.11
SSH1-206ENST00000547381 BEND3Q5T5X7 828 aa15.75■□□□□ 0.11
SSH1-206ENST00000547381 USP50Q70EL3 339 aaPredicted RBP15.75■□□□□ 0.11
SSH1-206ENST00000547381 ADARB2Q9NS39 739 aaKnown RBP15.75■□□□□ 0.11
SSH1-206ENST00000547381 BSDC1Q9NW68 430 aaPredicted RBP15.75■□□□□ 0.11
SSH1-206ENST00000547381 GPRC5DQ9NZD1 345 aa15.75■□□□□ 0.11
SSH1-206ENST00000547381 COL4A1P02462 1669 aa15.75■□□□□ 0.11
SSH1-206ENST00000547381 LTBP1Q14766 1721 aa15.74■□□□□ 0.11
SSH1-206ENST00000547381 XDHP47989 1333 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms