RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 HOXA10P31260 410 aaPredicted RBP26.28■■□□□ 1.8
GPN3-205ENST00000547323 FOXO4P98177 505 aa26.28■■□□□ 1.8
GPN3-205ENST00000547323 YBX3P16989 372 aaKnown RBP eCLIP26.27■■□□□ 1.81e-7■■□□□ 13.6
GPN3-205ENST00000547323 CTSWP56202 376 aa26.27■■□□□ 1.8
GPN3-205ENST00000547323 DALRD3Q5D0E6 543 aaKnown RBP26.27■■□□□ 1.8
GPN3-205ENST00000547323 TTLL6Q8N841 843 aa26.27■■□□□ 1.8
GPN3-205ENST00000547323 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.27■■□□□ 1.8
GPN3-205ENST00000547323 TTLL11Q8NHH1 800 aa26.27■■□□□ 1.8
GPN3-205ENST00000547323 RBM17Q96I25 401 aaKnown RBP26.27■■□□□ 1.8
GPN3-205ENST00000547323 BCS1LQ9Y276 419 aa26.27■■□□□ 1.8
GPN3-205ENST00000547323 RRP1P56182 461 aaKnown RBP26.26■■□□□ 1.79
GPN3-205ENST00000547323 ITPRIPQ8IWB1 547 aa26.26■■□□□ 1.79
GPN3-205ENST00000547323 COL4A1P02462 1669 aa26.25■■□□□ 1.79
GPN3-205ENST00000547323 MS4A1P11836 297 aa26.25■■□□□ 1.79
GPN3-205ENST00000547323 CNKSR1Q969H4 720 aa26.25■■□□□ 1.79
GPN3-205ENST00000547323 CRAMP1Q96RY5 1269 aa26.25■■□□□ 1.79
GPN3-205ENST00000547323 SEC31BQ9NQW1 1179 aa26.25■■□□□ 1.79
GPN3-205ENST00000547323 CSF1RP07333 972 aa26.24■■□□□ 1.79
GPN3-205ENST00000547323 CCDC152Q4G0S7 254 aa26.24■■□□□ 1.79
GPN3-205ENST00000547323 PRPF40BQ6NWY9 871 aaKnown RBP26.24■■□□□ 1.79
GPN3-205ENST00000547323 DDX46Q7L014 1031 aaKnown RBP26.24■■□□□ 1.79
GPN3-205ENST00000547323 GREM2Q9H772 168 aa26.24■■□□□ 1.79
GPN3-205ENST00000547323 ZNF219Q9P2Y4 722 aaPredicted RBP26.24■■□□□ 1.79
GPN3-205ENST00000547323 COG6Q9Y2V7 657 aa26.24■■□□□ 1.79
GPN3-205ENST00000547323 UBTFL1P0CB47 393 aaPredicted RBP26.23■■□□□ 1.79
GPN3-205ENST00000547323 ALDH1B1P30837 517 aa26.23■■□□□ 1.79
GPN3-205ENST00000547323 GPR162Q16538 588 aa26.23■■□□□ 1.79
GPN3-205ENST00000547323 LMBR1LQ6UX01 489 aa26.23■■□□□ 1.79
GPN3-205ENST00000547323 SLC51AQ86UW1 340 aa26.23■■□□□ 1.79
GPN3-205ENST00000547323 PDE3AQ14432 1141 aa26.22■■□□□ 1.79
GPN3-205ENST00000547323 BICC1Q9H694 974 aaKnown RBP26.22■■□□□ 1.79
GPN3-205ENST00000547323 SUPT16HQ9Y5B9 1047 aaKnown RBP26.22■■□□□ 1.79
GPN3-205ENST00000547323 GOLGB1Q14789 3259 aaKnown RBP26.21■■□□□ 1.79
GPN3-205ENST00000547323 ZBTB7BO15156 539 aaPredicted RBP26.21■■□□□ 1.79
GPN3-205ENST00000547323 ANKRD44Q8N8A2 993 aa26.21■■□□□ 1.79
GPN3-205ENST00000547323 CELF1Q92879 486 aaKnown RBP26.21■■□□□ 1.79
GPN3-205ENST00000547323 LRRFIP2Q9Y608 721 aaKnown RBP26.21■■□□□ 1.79
GPN3-205ENST00000547323 ARFGEF1Q9Y6D6 1849 aa26.21■■□□□ 1.79
GPN3-205ENST00000547323 FAM161AQ3B820 660 aa26.2■■□□□ 1.78
GPN3-205ENST00000547323 OLFM4Q6UX06 510 aa26.2■■□□□ 1.78
GPN3-205ENST00000547323 C21orf2O43822 256 aa26.19■■□□□ 1.78
GPN3-205ENST00000547323 GNAI3P08754 354 aa26.19■■□□□ 1.78
GPN3-205ENST00000547323 GRAPQ13588 217 aa26.19■■□□□ 1.78
GPN3-205ENST00000547323 MVPQ14764 893 aaKnown RBP26.19■■□□□ 1.78
GPN3-205ENST00000547323 GRAPLQ8TC17 118 aaPredicted RBP26.19■■□□□ 1.78
GPN3-205ENST00000547323 C7orf43Q8WVR3 580 aa26.19■■□□□ 1.78
GPN3-205ENST00000547323 CHMP3Q9Y3E7 222 aa26.19■■□□□ 1.78
GPN3-205ENST00000547323 ITGA6P23229 1130 aa26.17■■□□□ 1.78
GPN3-205ENST00000547323 RABL6Q3YEC7 729 aaPredicted RBP26.17■■□□□ 1.78
GPN3-205ENST00000547323 RTL9Q8NET4 1388 aa26.17■■□□□ 1.78
GPN3-205ENST00000547323 PPEF1O14829 653 aaPredicted RBP26.16■■□□□ 1.78
GPN3-205ENST00000547323 BBOX1O75936 387 aa26.16■■□□□ 1.78
GPN3-205ENST00000547323 RPS8P62241 208 aaKnown RBP26.16■■□□□ 1.78
GPN3-205ENST00000547323 C1orf115Q9H7X2 142 aa26.15■■□□□ 1.78
GPN3-205ENST00000547323 SPEF2Q9C093 1822 aa26.15■■□□□ 1.78
GPN3-205ENST00000547323 GNAI2P04899 355 aa26.14■■□□□ 1.78
GPN3-205ENST00000547323 ZNF594Q96JF6 807 aaPredicted RBP26.14■■□□□ 1.78
GPN3-205ENST00000547323 IFIT5Q13325 482 aaKnown RBP26.13■■□□□ 1.77
GPN3-205ENST00000547323 ARHGAP27Q6ZUM4 889 aa26.13■■□□□ 1.77
GPN3-205ENST00000547323 DDX19BQ9UMR2 479 aa26.13■■□□□ 1.77
GPN3-205ENST00000547323 ATP6V0A2Q9Y487 856 aa26.13■■□□□ 1.77
GPN3-205ENST00000547323 ANKRD18BA2A2Z9 1011 aa26.12■■□□□ 1.77
GPN3-205ENST00000547323 ANKRD18AQ8IVF6 992 aa26.12■■□□□ 1.77
GPN3-205ENST00000547323 CDC5LQ99459 802 aaKnown RBP26.12■■□□□ 1.77
GPN3-205ENST00000547323 HDAC5Q9UQL6 1122 aa26.12■■□□□ 1.77
GPN3-205ENST00000547323 CCDC57Q2TAC2 916 aa26.11■■□□□ 1.77
GPN3-205ENST00000547323 SP8Q8IXZ3 490 aa26.11■■□□□ 1.77
GPN3-205ENST00000547323 DCAF8L1A6NGE4 600 aa26.1■■□□□ 1.77
GPN3-205ENST00000547323 GRIN3BO60391 1043 aa26.1■■□□□ 1.77
GPN3-205ENST00000547323 ZBTB40Q9NUA8 1239 aa26.1■■□□□ 1.77
GPN3-205ENST00000547323 KLHDC4Q8TBB5 520 aa26.09■■□□□ 1.77
GPN3-205ENST00000547323 CRBNQ96SW2 442 aa26.09■■□□□ 1.77
GPN3-205ENST00000547323 FER1L6Q2WGJ9 1857 aa26.08■■□□□ 1.77
GPN3-205ENST00000547323 RFX5P48382 616 aaPredicted RBP26.08■■□□□ 1.77
GPN3-205ENST00000547323 IGHMBP2P38935 993 aaKnown RBP26.07■■□□□ 1.76
GPN3-205ENST00000547323 CCDC93Q567U6 631 aa26.07■■□□□ 1.76
GPN3-205ENST00000547323 TMC4Q7Z404 712 aa26.07■■□□□ 1.76
GPN3-205ENST00000547323 BSDC1Q9NW68 430 aaPredicted RBP26.07■■□□□ 1.76
GPN3-205ENST00000547323 LRRC37AA6NMS7 1700 aa26.06■■□□□ 1.76
GPN3-205ENST00000547323 NFKBIEO00221 500 aa26.06■■□□□ 1.76
GPN3-205ENST00000547323 TAF7LQ5H9L4 462 aa26.06■■□□□ 1.76
GPN3-205ENST00000547323 MPHOSPH8Q99549 860 aa26.06■■□□□ 1.76
GPN3-205ENST00000547323 PUS3Q9BZE2 481 aaKnown RBP26.06■■□□□ 1.76
GPN3-205ENST00000547323 SNED1Q8TER0 1413 aa26.05■■□□□ 1.76
GPN3-205ENST00000547323 UTRNP46939 3433 aa26.05■■□□□ 1.76
GPN3-205ENST00000547323 PNMA6EA0A0J9YXQ4 647 aa26.05■■□□□ 1.76
GPN3-205ENST00000547323 RASSF7Q02833 373 aa26.05■■□□□ 1.76
GPN3-205ENST00000547323 MTX1Q13505 466 aa26.05■■□□□ 1.76
GPN3-205ENST00000547323 SOGA3Q5TF21 947 aa26.05■■□□□ 1.76
GPN3-205ENST00000547323 CC2D2BQ6DHV5 1058 aa26.05■■□□□ 1.76
GPN3-205ENST00000547323 SRGAP3O43295 1099 aa26.04■■□□□ 1.76
GPN3-205ENST00000547323 PRELPP51888 382 aa26.04■■□□□ 1.76
GPN3-205ENST00000547323 GPSM2P81274 684 aa26.04■■□□□ 1.76
GPN3-205ENST00000547323 RTKN2Q8IZC4 609 aa26.04■■□□□ 1.76
GPN3-205ENST00000547323 MINPP1Q9UNW1 487 aa26.04■■□□□ 1.76
GPN3-205ENST00000547323 CCDC88AQ3V6T2 1871 aa26.04■■□□□ 1.76
GPN3-205ENST00000547323 IRX6P78412 446 aaPredicted RBP26.03■■□□□ 1.76
GPN3-205ENST00000547323 ATP8B2P98198 1209 aa26.03■■□□□ 1.76
GPN3-205ENST00000547323 PTPN12Q05209 780 aaKnown RBP26.03■■□□□ 1.76
GPN3-205ENST00000547323 LDHAL6AQ6ZMR3 332 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms