RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 FZD9O00144 591 aa13.34□□□□□ -0.27
BEST3-208ENST00000547208 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
BEST3-208ENST00000547208 SMC1BQ8NDV3 1235 aa13.34□□□□□ -0.27
BEST3-208ENST00000547208 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
BEST3-208ENST00000547208 IL16Q14005 1332 aa13.34□□□□□ -0.27
BEST3-208ENST00000547208 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
BEST3-208ENST00000547208 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
BEST3-208ENST00000547208 FAM89AQ96GI7 184 aa13.33□□□□□ -0.28
BEST3-208ENST00000547208 ATP6V0A2Q9Y487 856 aa13.33□□□□□ -0.28
BEST3-208ENST00000547208 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
BEST3-208ENST00000547208 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
BEST3-208ENST00000547208 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
BEST3-208ENST00000547208 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
BEST3-208ENST00000547208 SF3B3Q15393 1217 aaKnown RBP13.31□□□□□ -0.28
BEST3-208ENST00000547208 RIC3Q7Z5B4 369 aa13.31□□□□□ -0.28
BEST3-208ENST00000547208 RTFDC1Q9BY42 306 aaPredicted RBP13.31□□□□□ -0.28
BEST3-208ENST00000547208 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
BEST3-208ENST00000547208 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
BEST3-208ENST00000547208 BBOX1O75936 387 aa13.3□□□□□ -0.28
BEST3-208ENST00000547208 GRAPQ13588 217 aa13.3□□□□□ -0.28
BEST3-208ENST00000547208 TWISTNBQ3B726 338 aaPredicted RBP13.3□□□□□ -0.28
BEST3-208ENST00000547208 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
BEST3-208ENST00000547208 SP8Q8IXZ3 490 aa13.3□□□□□ -0.28
BEST3-208ENST00000547208 ZBTB38Q8NAP3 1195 aaPredicted RBP13.3□□□□□ -0.28
BEST3-208ENST00000547208 GRAPLQ8TC17 118 aaPredicted RBP13.3□□□□□ -0.28
BEST3-208ENST00000547208 MYD88Q99836 296 aa13.3□□□□□ -0.28
BEST3-208ENST00000547208 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
BEST3-208ENST00000547208 PSME4Q14997 1843 aa13.29□□□□□ -0.28
BEST3-208ENST00000547208 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
BEST3-208ENST00000547208 WDR63Q8IWG1 891 aa13.29□□□□□ -0.28
BEST3-208ENST00000547208 GPC2Q8N158 579 aa13.29□□□□□ -0.28
BEST3-208ENST00000547208 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
BEST3-208ENST00000547208 TAF1DQ9H5J8 278 aaPredicted RBP13.29□□□□□ -0.28
BEST3-208ENST00000547208 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
BEST3-208ENST00000547208 FOXN1O15353 648 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 G2E3Q7L622 706 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 JDP2Q8WYK2 163 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
BEST3-208ENST00000547208 CHMP4AQ9BY43 222 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 SCN9AQ15858 1988 aa13.28□□□□□ -0.28
BEST3-208ENST00000547208 PI4KAP2A4QPH2 592 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 DDX58O95786 925 aaKnown RBP13.27□□□□□ -0.29
BEST3-208ENST00000547208 PCCAP05165 728 aaPredicted RBP13.27□□□□□ -0.29
BEST3-208ENST00000547208 IGKV5-2P06315 115 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 AOC3Q16853 763 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 KSR2Q6VAB6 950 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 PI4KAP1Q8N8J0 262 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 VPS33BQ9H267 617 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.29
BEST3-208ENST00000547208 A0A1B0GUL6 1792 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 TRPM7Q96QT4 1865 aa13.27□□□□□ -0.29
BEST3-208ENST00000547208 ZNF646O15015 1829 aaPredicted RBP13.26□□□□□ -0.29
BEST3-208ENST00000547208 PPIP5K2O43314 1243 aa13.26□□□□□ -0.29
BEST3-208ENST00000547208 VAMP4O75379 141 aa13.26□□□□□ -0.29
BEST3-208ENST00000547208 DPP8Q6V1X1 898 aaPredicted RBP13.26□□□□□ -0.29
BEST3-208ENST00000547208 TMC4Q7Z404 712 aa13.26□□□□□ -0.29
BEST3-208ENST00000547208 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
BEST3-208ENST00000547208 MPNDQ8N594 471 aa13.26□□□□□ -0.29
BEST3-208ENST00000547208 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
BEST3-208ENST00000547208 STK31Q9BXU1 1019 aa13.26□□□□□ -0.29
BEST3-208ENST00000547208 CWC25Q9NXE8 425 aaPredicted RBP13.26□□□□□ -0.29
BEST3-208ENST00000547208 HACL1Q9UJ83 578 aa13.26□□□□□ -0.29
BEST3-208ENST00000547208 ZNF521Q96K83 1311 aa13.25□□□□□ -0.29
BEST3-208ENST00000547208 EPHX2P34913 555 aa13.25□□□□□ -0.29
BEST3-208ENST00000547208 SCNN1DP51172 638 aa13.25□□□□□ -0.29
BEST3-208ENST00000547208 EIF6P56537 245 aaKnown RBP13.25□□□□□ -0.29
BEST3-208ENST00000547208 EXOSC9Q06265 439 aaKnown RBP13.25□□□□□ -0.29
BEST3-208ENST00000547208 KIAA2012Q0VF49 1180 aa13.25□□□□□ -0.29
BEST3-208ENST00000547208 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
BEST3-208ENST00000547208 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
BEST3-208ENST00000547208 SUPT20HQ8NEM7 779 aa13.25□□□□□ -0.29
BEST3-208ENST00000547208 TMX4Q9H1E5 349 aaPredicted RBP13.25□□□□□ -0.29
BEST3-208ENST00000547208 PASKQ96RG2 1323 aa13.24□□□□□ -0.29
BEST3-208ENST00000547208 CDHR2Q9BYE9 1310 aa13.24□□□□□ -0.29
BEST3-208ENST00000547208 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
BEST3-208ENST00000547208 SEC31BQ9NQW1 1179 aa13.24□□□□□ -0.29
BEST3-208ENST00000547208 ZNRF3Q9ULT6 936 aa13.24□□□□□ -0.29
BEST3-208ENST00000547208 GJA3Q9Y6H8 435 aa13.24□□□□□ -0.29
BEST3-208ENST00000547208 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
BEST3-208ENST00000547208 PDE8AO60658 829 aa13.23□□□□□ -0.29
BEST3-208ENST00000547208 ITGBL1O95965 494 aaPredicted RBP13.23□□□□□ -0.29
BEST3-208ENST00000547208 RPS8P62241 208 aaKnown RBP13.23□□□□□ -0.29
BEST3-208ENST00000547208 GPSM2P81274 684 aa13.23□□□□□ -0.29
BEST3-208ENST00000547208 CXCL9Q07325 125 aa13.23□□□□□ -0.29
BEST3-208ENST00000547208 FLIIQ13045 1269 aa13.23□□□□□ -0.29
BEST3-208ENST00000547208 POLR2AP24928 1970 aaKnown RBP13.22□□□□□ -0.29
BEST3-208ENST00000547208 YDJCA8MPS7 323 aa13.22□□□□□ -0.29
BEST3-208ENST00000547208 HSP90B1P14625 803 aaKnown RBP13.22□□□□□ -0.29
BEST3-208ENST00000547208 EPS15P42566 896 aa13.22□□□□□ -0.29
BEST3-208ENST00000547208 FMR1Q06787 632 aaKnown RBP eCLIP13.22□□□□□ -0.29
BEST3-208ENST00000547208 EAPPQ56P03 285 aaPredicted RBP13.22□□□□□ -0.29
BEST3-208ENST00000547208 PNMA8AQ86V59 439 aaPredicted RBP13.22□□□□□ -0.29
BEST3-208ENST00000547208 POLLQ9UGP5 575 aa13.22□□□□□ -0.29
BEST3-208ENST00000547208 H7C1W4 665 aa13.21□□□□□ -0.29
BEST3-208ENST00000547208 NEXNQ0ZGT2 675 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms