RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 CASTP20810 708 aaKnown RBP22.42■■□□□ 1.18
VDR-204ENST00000547065 PKP1Q13835 747 aa22.42■■□□□ 1.18
VDR-204ENST00000547065 HLFQ16534 295 aa22.42■■□□□ 1.18
VDR-204ENST00000547065 CREB3L3Q68CJ9 461 aa22.42■■□□□ 1.18
VDR-204ENST00000547065 NLRP10Q86W26 655 aa22.42■■□□□ 1.18
VDR-204ENST00000547065 CEP126Q9P2H0 1117 aa22.42■■□□□ 1.18
VDR-204ENST00000547065 ZDHHC9Q9Y397 364 aa22.42■■□□□ 1.18
VDR-204ENST00000547065 SPATA31A5Q5VU36 1347 aa22.42■■□□□ 1.18
VDR-204ENST00000547065 SPATA31A7Q8IWB4 1347 aa22.42■■□□□ 1.18
VDR-204ENST00000547065 TIMM10P62072 90 aa22.41■■□□□ 1.18
VDR-204ENST00000547065 VPS53Q5VIR6 699 aa22.41■■□□□ 1.18
VDR-204ENST00000547065 RNF20Q5VTR2 975 aa22.41■■□□□ 1.18
VDR-204ENST00000547065 EDC3Q96F86 508 aaKnown RBP22.41■■□□□ 1.18
VDR-204ENST00000547065 DNAJC2Q99543 621 aaKnown RBP22.41■■□□□ 1.18
VDR-204ENST00000547065 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
VDR-204ENST00000547065 CYP46A1Q9Y6A2 500 aa22.41■■□□□ 1.18
VDR-204ENST00000547065 AK2P54819 239 aa22.4■■□□□ 1.18
VDR-204ENST00000547065 L1TD1Q5T7N2 865 aaKnown RBP22.4■■□□□ 1.18
VDR-204ENST00000547065 JAKMIP1Q96N16 626 aaKnown RBP22.4■■□□□ 1.18
VDR-204ENST00000547065 GZF1Q9H116 711 aaPredicted RBP22.4■■□□□ 1.18
VDR-204ENST00000547065 WNK3Q9BYP7 1800 aa22.4■■□□□ 1.18
VDR-204ENST00000547065 NUTM2BA6NNL0 878 aaPredicted RBP22.4■■□□□ 1.18
VDR-204ENST00000547065 NUTM2EB1AL46 878 aaPredicted RBP22.4■■□□□ 1.18
VDR-204ENST00000547065 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
VDR-204ENST00000547065 NUTM2AQ8IVF1 878 aaPredicted RBP22.4■■□□□ 1.18
VDR-204ENST00000547065 PDRG1Q9NUG6 133 aa22.4■■□□□ 1.18
VDR-204ENST00000547065 AKAP2Q9Y2D5 859 aa22.4■■□□□ 1.18
VDR-204ENST00000547065 SLC27A2O14975 620 aa22.39■■□□□ 1.17
VDR-204ENST00000547065 TAF5LO75529 589 aa22.39■■□□□ 1.17
VDR-204ENST00000547065 PSMA5P28066 241 aa22.39■■□□□ 1.17
VDR-204ENST00000547065 IFIT5Q13325 482 aaKnown RBP22.39■■□□□ 1.17
VDR-204ENST00000547065 KBTBD3Q8NAB2 608 aa22.39■■□□□ 1.17
VDR-204ENST00000547065 PUS3Q9BZE2 481 aaKnown RBP22.39■■□□□ 1.17
VDR-204ENST00000547065 RUFY3Q7L099 469 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 MARCH10Q8NA82 808 aaPredicted RBP22.38■■□□□ 1.17
VDR-204ENST00000547065 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.38■■□□□ 1.17
VDR-204ENST00000547065 ZSCAN31Q96LW9 406 aaPredicted RBP22.38■■□□□ 1.17
VDR-204ENST00000547065 JCADQ9P266 1359 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 A0A1B0GUL7 405 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 BRD1O95696 1058 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 GPTP24298 496 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 ADCK5Q3MIX3 580 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 TAF7LQ5H9L4 462 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 MCTP1Q6DN14 999 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 DZIP3Q86Y13 1208 aaKnown RBP22.38■■□□□ 1.17
VDR-204ENST00000547065 HMG20BQ9P0W2 317 aa22.38■■□□□ 1.17
VDR-204ENST00000547065 NRAPQ86VF7 1730 aa22.37■■□□□ 1.17
VDR-204ENST00000547065 ZNF609O15014 1411 aa22.37■■□□□ 1.17
VDR-204ENST00000547065 TSGA10IPQ3SY00 556 aa22.37■■□□□ 1.17
VDR-204ENST00000547065 MCMDC2Q4G0Z9 681 aa22.37■■□□□ 1.17
VDR-204ENST00000547065 ZNF589Q86UQ0 364 aaPredicted RBP22.37■■□□□ 1.17
VDR-204ENST00000547065 PAG1Q9NWQ8 432 aa22.37■■□□□ 1.17
VDR-204ENST00000547065 PIP4K2BP78356 416 aa22.36■■□□□ 1.17
VDR-204ENST00000547065 USPL1Q5W0Q7 1092 aa22.36■■□□□ 1.17
VDR-204ENST00000547065 GOLGA6L3A6NEY3 463 aa22.35■■□□□ 1.17
VDR-204ENST00000547065 DDX46Q7L014 1031 aaKnown RBP22.35■■□□□ 1.17
VDR-204ENST00000547065 CCDC9Q9Y3X0 531 aaKnown RBP22.35■■□□□ 1.17
VDR-204ENST00000547065 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.35■■□□□ 1.17
VDR-204ENST00000547065 NDUFB9Q9Y6M9 179 aa22.35■■□□□ 1.17
VDR-204ENST00000547065 FSD2A1L4K1 749 aa22.35■■□□□ 1.17
VDR-204ENST00000547065 IFIT1P09914 478 aaKnown RBP22.35■■□□□ 1.17
VDR-204ENST00000547065 CPA1P15085 419 aa22.35■■□□□ 1.17
VDR-204ENST00000547065 EIF5P55010 431 aaKnown RBP22.35■■□□□ 1.17
VDR-204ENST00000547065 ZNF34Q8IZ26 560 aa22.35■■□□□ 1.17
VDR-204ENST00000547065 TTLL11Q8NHH1 800 aa22.35■■□□□ 1.17
VDR-204ENST00000547065 PALLDQ8WX93 1383 aa22.35■■□□□ 1.17
VDR-204ENST00000547065 SH2B1Q9NRF2 756 aaPredicted RBP22.35■■□□□ 1.17
VDR-204ENST00000547065 TRMT112Q9UI30 125 aaKnown RBP22.35■■□□□ 1.17
VDR-204ENST00000547065 TBC1D2BQ9UPU7 963 aa22.35■■□□□ 1.17
VDR-204ENST00000547065 SLIT2O94813 1529 aa22.34■■□□□ 1.17
VDR-204ENST00000547065 IRS4O14654 1257 aaPredicted RBP22.34■■□□□ 1.17
VDR-204ENST00000547065 INTS5Q6P9B9 1019 aaKnown RBP22.34■■□□□ 1.17
VDR-204ENST00000547065 ALDH8A1Q9H2A2 487 aaPredicted RBP22.34■■□□□ 1.17
VDR-204ENST00000547065 HELLSQ9NRZ9 838 aa22.34■■□□□ 1.17
VDR-204ENST00000547065 CCDC87Q9NVE4 849 aa22.34■■□□□ 1.17
VDR-204ENST00000547065 U3KPZ7 1027 aaPredicted RBP22.34■■□□□ 1.17
VDR-204ENST00000547065 RPAP1Q9BWH6 1393 aaPredicted RBP22.33■■□□□ 1.17
VDR-204ENST00000547065 SH3TC1Q8TE82 1336 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 GOLIM4O00461 696 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 ATP6V1AP38606 617 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 CTSWP56202 376 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 KLHL40Q2TBA0 621 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 CCDC158Q5M9N0 1113 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 SYNE4Q8N205 404 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 ACSBG1Q96GR2 724 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 LMBRD1Q9NUN5 540 aa22.33■■□□□ 1.17
VDR-204ENST00000547065 ISY1Q9ULR0 285 aaKnown RBP22.33■■□□□ 1.17
VDR-204ENST00000547065 DOT1LQ8TEK3 1739 aa22.33■■□□□ 1.16
VDR-204ENST00000547065 ANKRD18BA2A2Z9 1011 aa22.33■■□□□ 1.16
VDR-204ENST00000547065 PDE8AO60658 829 aa22.33■■□□□ 1.16
VDR-204ENST00000547065 KRT32Q14532 448 aa22.33■■□□□ 1.16
VDR-204ENST00000547065 CCDC85AQ96PX6 553 aaPredicted RBP22.33■■□□□ 1.16
VDR-204ENST00000547065 WDR33Q9C0J8 1336 aaKnown RBP22.32■■□□□ 1.16
VDR-204ENST00000547065 LOC102724428A0A0B4J2F2 783 aa22.32■■□□□ 1.16
VDR-204ENST00000547065 SIK1P57059 783 aa22.32■■□□□ 1.16
VDR-204ENST00000547065 GORABQ5T7V8 394 aa22.32■■□□□ 1.16
VDR-204ENST00000547065 SMARCC1Q92922 1105 aaPredicted RBP22.32■■□□□ 1.16
VDR-204ENST00000547065 AK7Q96M32 723 aa22.32■■□□□ 1.16
VDR-204ENST00000547065 RIPOR2Q9Y4F9 1068 aa22.32■■□□□ 1.16
VDR-204ENST00000547065 DDX49Q9Y6V7 483 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms