RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TMC4Q7Z404 712 aa21.21■□□□□ 0.99
CCDC38-203ENST00000546803 TTLL11Q8NHH1 800 aa21.21■□□□□ 0.99
CCDC38-203ENST00000546803 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
CCDC38-203ENST00000546803 DLEC1Q9Y238 1755 aa21.2■□□□□ 0.99
CCDC38-203ENST00000546803 PPEF1O14829 653 aaPredicted RBP21.2■□□□□ 0.98
CCDC38-203ENST00000546803 GRIPAP1Q4V328 841 aa21.2■□□□□ 0.98
CCDC38-203ENST00000546803 CCDC93Q567U6 631 aa21.2■□□□□ 0.98
CCDC38-203ENST00000546803 TMX4Q9H1E5 349 aaPredicted RBP21.2■□□□□ 0.98
CCDC38-203ENST00000546803 CSF1RP07333 972 aa21.19■□□□□ 0.98
CCDC38-203ENST00000546803 RTKN2Q8IZC4 609 aa21.19■□□□□ 0.98
CCDC38-203ENST00000546803 USP44Q9H0E7 712 aa21.19■□□□□ 0.98
CCDC38-203ENST00000546803 BRCA1P38398 1863 aaKnown RBP21.19■□□□□ 0.98
CCDC38-203ENST00000546803 RTL9Q8NET4 1388 aa21.19■□□□□ 0.98
CCDC38-203ENST00000546803 NBPF7P0C2Y1 421 aaPredicted RBP21.18■□□□□ 0.98
CCDC38-203ENST00000546803 ATP6V0A2Q9Y487 856 aa21.18■□□□□ 0.98
CCDC38-203ENST00000546803 RPS8P62241 208 aaKnown RBP21.17■□□□□ 0.98
CCDC38-203ENST00000546803 FOXO4P98177 505 aa21.17■□□□□ 0.98
CCDC38-203ENST00000546803 SP8Q8IXZ3 490 aa21.17■□□□□ 0.98
CCDC38-203ENST00000546803 CDC5LQ99459 802 aaKnown RBP21.17■□□□□ 0.98
CCDC38-203ENST00000546803 HDAC5Q9UQL6 1122 aa21.17■□□□□ 0.98
CCDC38-203ENST00000546803 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
CCDC38-203ENST00000546803 MS4A1P11836 297 aa21.16■□□□□ 0.98
CCDC38-203ENST00000546803 FTSJ3Q8IY81 847 aaKnown RBP21.16■□□□□ 0.98
CCDC38-203ENST00000546803 CELF1Q92879 486 aaKnown RBP21.16■□□□□ 0.98
CCDC38-203ENST00000546803 CLUAP1Q96AJ1 413 aa21.16■□□□□ 0.98
CCDC38-203ENST00000546803 CCDC85AQ96PX6 553 aaPredicted RBP21.16■□□□□ 0.98
CCDC38-203ENST00000546803 GREM2Q9H772 168 aa21.16■□□□□ 0.98
CCDC38-203ENST00000546803 SEC31BQ9NQW1 1179 aa21.16■□□□□ 0.98
CCDC38-203ENST00000546803 DDX60Q8IY21 1712 aaKnown RBP21.15■□□□□ 0.98
CCDC38-203ENST00000546803 NFKBIEO00221 500 aa21.15■□□□□ 0.98
CCDC38-203ENST00000546803 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
CCDC38-203ENST00000546803 SUCLG2Q96I99 432 aa21.15■□□□□ 0.98
CCDC38-203ENST00000546803 TAOK3Q9H2K8 898 aa21.15■□□□□ 0.98
CCDC38-203ENST00000546803 LMBR1LQ6UX01 489 aa21.14■□□□□ 0.97
CCDC38-203ENST00000546803 ANKRD18AQ8IVF6 992 aa21.14■□□□□ 0.97
CCDC38-203ENST00000546803 TNNQ9UQP3 1299 aa21.14■□□□□ 0.97
CCDC38-203ENST00000546803 UBTFL1P0CB47 393 aaPredicted RBP21.13■□□□□ 0.97
CCDC38-203ENST00000546803 ITGA6P23229 1130 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
CCDC38-203ENST00000546803 FAM161AQ3B820 660 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 EPHA10Q5JZY3 1008 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 OLFM4Q6UX06 510 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 TMEM57Q8N5G2 664 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 KAZALD1Q96I82 304 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 SLX4Q8IY92 1834 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 ARFGEF1Q9Y6D6 1849 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 LAMB2P55268 1798 aa21.13■□□□□ 0.97
CCDC38-203ENST00000546803 ANKRD18BA2A2Z9 1011 aa21.12■□□□□ 0.97
CCDC38-203ENST00000546803 GNAI3P08754 354 aa21.12■□□□□ 0.97
CCDC38-203ENST00000546803 LMNB1P20700 586 aa21.12■□□□□ 0.97
CCDC38-203ENST00000546803 RASSF7Q02833 373 aa21.12■□□□□ 0.97
CCDC38-203ENST00000546803 IFIT5Q13325 482 aaKnown RBP21.12■□□□□ 0.97
CCDC38-203ENST00000546803 RABL6Q3YEC7 729 aaPredicted RBP21.12■□□□□ 0.97
CCDC38-203ENST00000546803 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.12■□□□□ 0.97
CCDC38-203ENST00000546803 PSMD1Q99460 953 aa21.12■□□□□ 0.97
CCDC38-203ENST00000546803 BICC1Q9H694 974 aaKnown RBP21.11■□□□□ 0.97
CCDC38-203ENST00000546803 CHMP3Q9Y3E7 222 aa21.11■□□□□ 0.97
CCDC38-203ENST00000546803 IGHMBP2P38935 993 aaKnown RBP21.1■□□□□ 0.97
CCDC38-203ENST00000546803 CCDC57Q2TAC2 916 aa21.1■□□□□ 0.97
CCDC38-203ENST00000546803 C9orf131Q5VYM1 1079 aa21.1■□□□□ 0.97
CCDC38-203ENST00000546803 MEIS3Q99687 375 aa21.1■□□□□ 0.97
CCDC38-203ENST00000546803 BSDC1Q9NW68 430 aaPredicted RBP21.1■□□□□ 0.97
CCDC38-203ENST00000546803 SNED1Q8TER0 1413 aa21.1■□□□□ 0.97
CCDC38-203ENST00000546803 RLBP1P12271 317 aa21.09■□□□□ 0.97
CCDC38-203ENST00000546803 YY1P25490 414 aa21.09■□□□□ 0.97
CCDC38-203ENST00000546803 MPNDQ8N594 471 aa21.09■□□□□ 0.97
CCDC38-203ENST00000546803 SUPT20HQ8NEM7 779 aa21.09■□□□□ 0.97
CCDC38-203ENST00000546803 RNF181Q9P0P0 153 aa21.09■□□□□ 0.97
CCDC38-203ENST00000546803 DPP8Q6V1X1 898 aaPredicted RBP21.08■□□□□ 0.97
CCDC38-203ENST00000546803 ANKRD44Q8N8A2 993 aa21.08■□□□□ 0.97
CCDC38-203ENST00000546803 MPHOSPH8Q99549 860 aa21.08■□□□□ 0.97
CCDC38-203ENST00000546803 RTFDC1Q9BY42 306 aaPredicted RBP21.08■□□□□ 0.97
CCDC38-203ENST00000546803 PRELPP51888 382 aa21.07■□□□□ 0.96
CCDC38-203ENST00000546803 TAF7LQ5H9L4 462 aa21.07■□□□□ 0.96
CCDC38-203ENST00000546803 ITPRIPQ8IWB1 547 aa21.07■□□□□ 0.96
CCDC38-203ENST00000546803 VPS33BQ9H267 617 aa21.07■□□□□ 0.96
CCDC38-203ENST00000546803 NSFL1CQ9UNZ2 370 aaKnown RBP21.07■□□□□ 0.96
CCDC38-203ENST00000546803 ZC3H4Q9UPT8 1303 aaKnown RBP21.06■□□□□ 0.96
CCDC38-203ENST00000546803 SLC51AQ86UW1 340 aa21.06■□□□□ 0.96
CCDC38-203ENST00000546803 PANK1Q8TE04 598 aa21.06■□□□□ 0.96
CCDC38-203ENST00000546803 ZNF277Q9NRM2 450 aaPredicted RBP21.06■□□□□ 0.96
CCDC38-203ENST00000546803 PODXL2Q9NZ53 605 aa21.06■□□□□ 0.96
CCDC38-203ENST00000546803 LRRFIP2Q9Y608 721 aaKnown RBP21.06■□□□□ 0.96
CCDC38-203ENST00000546803 PLIN1O60240 522 aa21.05■□□□□ 0.96
CCDC38-203ENST00000546803 IARSP41252 1262 aaKnown RBP21.05■□□□□ 0.96
CCDC38-203ENST00000546803 GPSM2P81274 684 aa21.05■□□□□ 0.96
CCDC38-203ENST00000546803 PDE3AQ14432 1141 aa21.05■□□□□ 0.96
CCDC38-203ENST00000546803 GNAI2P04899 355 aa21.04■□□□□ 0.96
CCDC38-203ENST00000546803 ANKIB1Q9P2G1 1089 aa21.04■□□□□ 0.96
CCDC38-203ENST00000546803 MINPP1Q9UNW1 487 aa21.04■□□□□ 0.96
CCDC38-203ENST00000546803 ZBTB7BO15156 539 aaPredicted RBP21.03■□□□□ 0.96
CCDC38-203ENST00000546803 XDHP47989 1333 aa21.03■□□□□ 0.96
CCDC38-203ENST00000546803 LDHAL6AQ6ZMR3 332 aa21.02■□□□□ 0.96
CCDC38-203ENST00000546803 ANKRD2Q9GZV1 360 aa21.02■□□□□ 0.96
CCDC38-203ENST00000546803 CHMP4BQ9H444 224 aaKnown RBP21.02■□□□□ 0.96
CCDC38-203ENST00000546803 GGA1Q9UJY5 639 aa21.02■□□□□ 0.96
CCDC38-203ENST00000546803 COL4A1P02462 1669 aa21.02■□□□□ 0.95
CCDC38-203ENST00000546803 C6orf229H3BNL8 230 aa21.01■□□□□ 0.95
CCDC38-203ENST00000546803 ATP2B4P23634 1241 aa21.01■□□□□ 0.95
CCDC38-203ENST00000546803 MVPQ14764 893 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms