RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 JARID2Q92833 1246 aaPredicted RBP16.63■□□□□ 0.25
LINC00661-201ENST00000546512 NEURL1BA8MQ27 555 aa16.62■□□□□ 0.25
LINC00661-201ENST00000546512 SP8Q8IXZ3 490 aa16.62■□□□□ 0.25
LINC00661-201ENST00000546512 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
LINC00661-201ENST00000546512 CACNA1FO60840 1977 aa16.61■□□□□ 0.25
LINC00661-201ENST00000546512 PDE8AO60658 829 aa16.61■□□□□ 0.25
LINC00661-201ENST00000546512 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
LINC00661-201ENST00000546512 TMC4Q7Z404 712 aa16.61■□□□□ 0.25
LINC00661-201ENST00000546512 MIER1Q8N108 512 aa16.61■□□□□ 0.25
LINC00661-201ENST00000546512 CELF1Q92879 486 aaKnown RBP16.61■□□□□ 0.25
LINC00661-201ENST00000546512 CDHR2Q9BYE9 1310 aa16.61■□□□□ 0.25
LINC00661-201ENST00000546512 TAF1P21675 1872 aa16.61■□□□□ 0.25
LINC00661-201ENST00000546512 DDNO94850 711 aaPredicted RBP16.6■□□□□ 0.25
LINC00661-201ENST00000546512 SLFN5Q08AF3 891 aa16.6■□□□□ 0.25
LINC00661-201ENST00000546512 DPP8Q6V1X1 898 aaPredicted RBP16.6■□□□□ 0.25
LINC00661-201ENST00000546512 JDP2Q8WYK2 163 aa16.6■□□□□ 0.25
LINC00661-201ENST00000546512 CCDC152Q4G0S7 254 aa16.59■□□□□ 0.25
LINC00661-201ENST00000546512 LARGE2Q8N3Y3 721 aa16.59■□□□□ 0.25
LINC00661-201ENST00000546512 MPNDQ8N594 471 aa16.59■□□□□ 0.25
LINC00661-201ENST00000546512 SUPT20HQ8NEM7 779 aa16.59■□□□□ 0.25
LINC00661-201ENST00000546512 LINS1Q8NG48 757 aa16.59■□□□□ 0.25
LINC00661-201ENST00000546512 CDCA7LQ96GN5 454 aa16.59■□□□□ 0.25
LINC00661-201ENST00000546512 ZNF541Q9H0D2 1346 aa16.59■□□□□ 0.25
LINC00661-201ENST00000546512 WDR90Q96KV7 1748 aa16.59■□□□□ 0.25
LINC00661-201ENST00000546512 F6X3S4 739 aa16.58■□□□□ 0.24
LINC00661-201ENST00000546512 FZD9O00144 591 aa16.58■□□□□ 0.24
LINC00661-201ENST00000546512 PPIP5K2O43314 1243 aa16.58■□□□□ 0.24
LINC00661-201ENST00000546512 GCKRQ14397 625 aa16.58■□□□□ 0.24
LINC00661-201ENST00000546512 RBM46Q8TBY0 533 aaKnown RBP16.58■□□□□ 0.24
LINC00661-201ENST00000546512 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
LINC00661-201ENST00000546512 RTFDC1Q9BY42 306 aaPredicted RBP16.58■□□□□ 0.24
LINC00661-201ENST00000546512 SEC31BQ9NQW1 1179 aa16.58■□□□□ 0.24
LINC00661-201ENST00000546512 COL4A1P02462 1669 aa16.58■□□□□ 0.24
LINC00661-201ENST00000546512 COL4A5P29400 1685 aa16.58■□□□□ 0.24
LINC00661-201ENST00000546512 LRRC37AA6NMS7 1700 aa16.57■□□□□ 0.24
LINC00661-201ENST00000546512 POTECB2RU33 542 aa16.57■□□□□ 0.24
LINC00661-201ENST00000546512 CTSWP56202 376 aa16.57■□□□□ 0.24
LINC00661-201ENST00000546512 RPS8P62241 208 aaKnown RBP16.57■□□□□ 0.24
LINC00661-201ENST00000546512 AOC3Q16853 763 aa16.57■□□□□ 0.24
LINC00661-201ENST00000546512 UBE3BQ7Z3V4 1068 aa16.57■□□□□ 0.24
LINC00661-201ENST00000546512 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
LINC00661-201ENST00000546512 H7C1W4 665 aa16.56■□□□□ 0.24
LINC00661-201ENST00000546512 HSPA6P17066 643 aa16.56■□□□□ 0.24
LINC00661-201ENST00000546512 NIM1KQ8IY84 436 aa16.56■□□□□ 0.24
LINC00661-201ENST00000546512 EIF6P56537 245 aaKnown RBP16.55■□□□□ 0.24
LINC00661-201ENST00000546512 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
LINC00661-201ENST00000546512 L3MBTL3Q96JM7 780 aaPredicted RBP16.55■□□□□ 0.24
LINC00661-201ENST00000546512 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
LINC00661-201ENST00000546512 GPSM2P81274 684 aa16.54■□□□□ 0.24
LINC00661-201ENST00000546512 FSTL1Q12841 308 aa16.54■□□□□ 0.24
LINC00661-201ENST00000546512 TRMT2AQ8IZ69 625 aaKnown RBP16.54■□□□□ 0.24
LINC00661-201ENST00000546512 GPC2Q8N158 579 aa16.54■□□□□ 0.24
LINC00661-201ENST00000546512 MRPL50Q8N5N7 158 aaKnown RBP16.54■□□□□ 0.24
LINC00661-201ENST00000546512 SMC1BQ8NDV3 1235 aa16.54■□□□□ 0.24
LINC00661-201ENST00000546512 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
LINC00661-201ENST00000546512 DUOX1Q9NRD9 1551 aa16.54■□□□□ 0.24
LINC00661-201ENST00000546512 IQCA1LA6NCM1 817 aa16.53■□□□□ 0.24
LINC00661-201ENST00000546512 CASP7P55210 303 aa16.53■□□□□ 0.24
LINC00661-201ENST00000546512 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
LINC00661-201ENST00000546512 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
LINC00661-201ENST00000546512 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
LINC00661-201ENST00000546512 GREM2Q9H772 168 aa16.53■□□□□ 0.24
LINC00661-201ENST00000546512 GJA3Q9Y6H8 435 aa16.53■□□□□ 0.24
LINC00661-201ENST00000546512 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
LINC00661-201ENST00000546512 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.24
LINC00661-201ENST00000546512 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.24
LINC00661-201ENST00000546512 PLA2G12BQ9BX93 195 aa16.52■□□□□ 0.24
LINC00661-201ENST00000546512 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
LINC00661-201ENST00000546512 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.24
LINC00661-201ENST00000546512 MYH3P11055 1940 aa16.52■□□□□ 0.23
LINC00661-201ENST00000546512 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
LINC00661-201ENST00000546512 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
LINC00661-201ENST00000546512 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
LINC00661-201ENST00000546512 HACL1Q9UJ83 578 aa16.51■□□□□ 0.23
LINC00661-201ENST00000546512 PTPRCP08575 1304 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 SCN4AP35499 1836 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 ALDH1L2Q3SY69 923 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 TBC1D16Q8TBP0 767 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 EYA3Q99504 573 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 SRCIN1Q9C0H9 1055 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 TAF1DQ9H5J8 278 aaPredicted RBP16.5■□□□□ 0.23
LINC00661-201ENST00000546512 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 ANKIB1Q9P2G1 1089 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 LTBP1Q14766 1721 aa16.5■□□□□ 0.23
LINC00661-201ENST00000546512 GRM8O00222 908 aa16.49■□□□□ 0.23
LINC00661-201ENST00000546512 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
LINC00661-201ENST00000546512 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
LINC00661-201ENST00000546512 CXCL9Q07325 125 aa16.49■□□□□ 0.23
LINC00661-201ENST00000546512 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
LINC00661-201ENST00000546512 SMC4Q9NTJ3 1288 aa16.49■□□□□ 0.23
LINC00661-201ENST00000546512 UFL1O94874 794 aa16.48■□□□□ 0.23
LINC00661-201ENST00000546512 CSF1RP07333 972 aa16.48■□□□□ 0.23
LINC00661-201ENST00000546512 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
LINC00661-201ENST00000546512 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
LINC00661-201ENST00000546512 ITGA6P23229 1130 aa16.48■□□□□ 0.23
LINC00661-201ENST00000546512 LMOD1P29536 600 aaPredicted RBP16.48■□□□□ 0.23
LINC00661-201ENST00000546512 EPHX2P34913 555 aa16.48■□□□□ 0.23
LINC00661-201ENST00000546512 APLP1P51693 650 aa16.48■□□□□ 0.23
LINC00661-201ENST00000546512 GPR101Q96P66 508 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms