RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.48
SSH1-203ENST00000546433 DDX11Q96FC9 970 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 GOLGA6L7A0A1B0GV03 622 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 SYCE3A1L190 88 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
SSH1-203ENST00000546433 KIAA0754O94854 1291 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 TNIP1Q15025 636 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 ARHGAP29Q52LW3 1261 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 EAPPQ56P03 285 aaPredicted RBP12.08□□□□□ -0.48
SSH1-203ENST00000546433 C8orf76Q96K31 380 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 FGFR1OPO95684 399 aaKnown RBP12.07□□□□□ -0.48
SSH1-203ENST00000546433 SSBP05455 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
SSH1-203ENST00000546433 KIAA1328Q86T90 577 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 KIF22Q14807 665 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 TTF1Q15361 905 aaPredicted RBP12.07□□□□□ -0.48
SSH1-203ENST00000546433 SEPT7Q16181 437 aaKnown RBP12.07□□□□□ -0.48
SSH1-203ENST00000546433 CTCFLQ8NI51 663 aaPredicted RBP12.07□□□□□ -0.48
SSH1-203ENST00000546433 RAB34Q9BZG1 259 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
SSH1-203ENST00000546433 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
SSH1-203ENST00000546433 BOLA2Q9H3K6 86 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 KIAA0232Q92628 1395 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 USP5P45974 858 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 ARHGAP45Q92619 1136 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 TSG101Q99816 390 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 DDX19AQ9NUU7 478 aaKnown RBP12.07□□□□□ -0.48
SSH1-203ENST00000546433 LRRFIP2Q9Y608 721 aaKnown RBP12.07□□□□□ -0.48
SSH1-203ENST00000546433 NEMFO60524 1076 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 TRIM27P14373 513 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 FLIIQ13045 1269 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 FILIP1Q7Z7B0 1213 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 LARGE2Q8N3Y3 721 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
SSH1-203ENST00000546433 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
SSH1-203ENST00000546433 METP08581 1390 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 OVOS2A0A0G2JMS6 1433 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 OVOS2A0A0J9YW53 1432 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 ZNF213O14771 459 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 KIF20AO95235 890 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 HLA-DOAP06340 250 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 NEFHP12036 1026 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 OVOS2Q6IE36 1432 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 PYM1Q9BRP8 204 aaKnown RBP12.06□□□□□ -0.48
SSH1-203ENST00000546433 ECHDC1Q9NTX5 307 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 HMG20BQ9P0W2 317 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 FKBP15Q5T1M5 1219 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 H7C1D1 291 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 DNAI2Q9GZS0 605 aa12.06□□□□□ -0.48
SSH1-203ENST00000546433 POLR3DP05423 398 aaPredicted RBP12.05□□□□□ -0.48
SSH1-203ENST00000546433 MCM3P25205 808 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 GCC2Q8IWJ2 1684 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 WDR17Q8IZU2 1322 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 MKNK2Q9HBH9 465 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 SLC12A7Q9Y666 1083 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 CABP5Q9NP86 173 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 TRIM21P19474 475 aaKnown RBP12.05□□□□□ -0.48
SSH1-203ENST00000546433 SSRP1Q08945 709 aaKnown RBP12.05□□□□□ -0.48
SSH1-203ENST00000546433 C20orf194Q5TEA3 1177 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 C2CD5Q86YS7 1000 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 UBXN4Q92575 508 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 SPA17Q15506 151 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 DALRD3Q5D0E6 543 aaKnown RBP12.05□□□□□ -0.48
SSH1-203ENST00000546433 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
SSH1-203ENST00000546433 RTL1A6NKG5 1358 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 CAVIN2O95810 425 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 CETN2P41208 172 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 TMEM266Q2M3C6 531 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 BIN2Q9UBW5 565 aaPredicted RBP12.04□□□□□ -0.48
SSH1-203ENST00000546433 CDC42BPGQ6DT37 1551 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 SKIDA1Q1XH10 827 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 KIF1BO60333 1816 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 OTUD7BQ6GQQ9 843 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 FAM177A1Q8N128 213 aaPredicted RBP12.04□□□□□ -0.48
SSH1-203ENST00000546433 ASXL1Q8IXJ9 1541 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 BAG3O95817 575 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 PTPN14Q15678 1187 aa12.04□□□□□ -0.48
SSH1-203ENST00000546433 RBM10P98175 930 aaKnown RBP12.03□□□□□ -0.48
SSH1-203ENST00000546433 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 SEPT11Q9NVA2 429 aaKnown RBP12.03□□□□□ -0.48
SSH1-203ENST00000546433 HDAC1Q13547 482 aaPredicted RBP12.03□□□□□ -0.48
SSH1-203ENST00000546433 VPS36Q86VN1 386 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 EHMT1Q9H9B1 1298 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
SSH1-203ENST00000546433 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
SSH1-203ENST00000546433 SPINK5Q9NQ38 1064 aaPredicted RBP12.03□□□□□ -0.48
SSH1-203ENST00000546433 WWC3Q9ULE0 1092 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 GOLGA8AA7E2F4 631 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 GOLGA8BA8MQT2 603 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 MINDY4BA8MYZ0 360 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 GSDMDP57764 484 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 CAMK4Q16566 473 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 MAP9Q49MG5 647 aa12.03□□□□□ -0.48
SSH1-203ENST00000546433 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms