RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 RBM17Q96I25 401 aaKnown RBP26.2■■□□□ 1.79
SCARB1-211ENST00000546215 CRAMP1Q96RY5 1269 aa26.2■■□□□ 1.79
SCARB1-211ENST00000546215 MYH3P11055 1940 aa26.2■■□□□ 1.79
SCARB1-211ENST00000546215 GPR162Q16538 588 aa26.2■■□□□ 1.78
SCARB1-211ENST00000546215 SLX4Q8IY92 1834 aa26.19■■□□□ 1.78
SCARB1-211ENST00000546215 FOXO4P98177 505 aa26.19■■□□□ 1.78
SCARB1-211ENST00000546215 PRPF40BQ6NWY9 871 aaKnown RBP26.19■■□□□ 1.78
SCARB1-211ENST00000546215 KAZALD1Q96I82 304 aa26.19■■□□□ 1.78
SCARB1-211ENST00000546215 SUCLG2Q96I99 432 aa26.19■■□□□ 1.78
SCARB1-211ENST00000546215 CSF1RP07333 972 aa26.18■■□□□ 1.78
SCARB1-211ENST00000546215 CCDC152Q4G0S7 254 aa26.18■■□□□ 1.78
SCARB1-211ENST00000546215 EPHA10Q5JZY3 1008 aa26.18■■□□□ 1.78
SCARB1-211ENST00000546215 DDX46Q7L014 1031 aaKnown RBP26.18■■□□□ 1.78
SCARB1-211ENST00000546215 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.18■■□□□ 1.78
SCARB1-211ENST00000546215 PANK1Q8TE04 598 aa26.18■■□□□ 1.78
SCARB1-211ENST00000546215 CACNA1SQ13698 1873 aa26.18■■□□□ 1.78
SCARB1-211ENST00000546215 MS4A1P11836 297 aa26.17■■□□□ 1.78
SCARB1-211ENST00000546215 CCDC85AQ96PX6 553 aaPredicted RBP26.17■■□□□ 1.78
SCARB1-211ENST00000546215 ARFGEF1Q9Y6D6 1849 aa26.17■■□□□ 1.78
SCARB1-211ENST00000546215 TAF1P21675 1872 aa26.16■■□□□ 1.78
SCARB1-211ENST00000546215 MEIS3Q99687 375 aa26.16■■□□□ 1.78
SCARB1-211ENST00000546215 C7orf43Q8WVR3 580 aa26.16■■□□□ 1.78
SCARB1-211ENST00000546215 GRAPQ13588 217 aa26.15■■□□□ 1.78
SCARB1-211ENST00000546215 GRAPLQ8TC17 118 aaPredicted RBP26.15■■□□□ 1.78
SCARB1-211ENST00000546215 GREM2Q9H772 168 aa26.15■■□□□ 1.78
SCARB1-211ENST00000546215 SEC31BQ9NQW1 1179 aa26.15■■□□□ 1.78
SCARB1-211ENST00000546215 RTL9Q8NET4 1388 aa26.14■■□□□ 1.77
SCARB1-211ENST00000546215 UBTFL1P0CB47 393 aaPredicted RBP26.13■■□□□ 1.77
SCARB1-211ENST00000546215 PDE3AQ14432 1141 aa26.13■■□□□ 1.77
SCARB1-211ENST00000546215 LMBR1LQ6UX01 489 aa26.13■■□□□ 1.77
SCARB1-211ENST00000546215 ITPRIPQ8IWB1 547 aa26.13■■□□□ 1.77
SCARB1-211ENST00000546215 CELF1Q92879 486 aaKnown RBP26.13■■□□□ 1.77
SCARB1-211ENST00000546215 BICC1Q9H694 974 aaKnown RBP26.13■■□□□ 1.77
SCARB1-211ENST00000546215 DCAF8L1A6NGE4 600 aa26.12■■□□□ 1.77
SCARB1-211ENST00000546215 C21orf2O43822 256 aa26.12■■□□□ 1.77
SCARB1-211ENST00000546215 BBOX1O75936 387 aa26.12■■□□□ 1.77
SCARB1-211ENST00000546215 GNAI3P08754 354 aa26.12■■□□□ 1.77
SCARB1-211ENST00000546215 C20orf194Q5TEA3 1177 aa26.12■■□□□ 1.77
SCARB1-211ENST00000546215 ZNF219Q9P2Y4 722 aaPredicted RBP26.12■■□□□ 1.77
SCARB1-211ENST00000546215 COL4A1P02462 1669 aa26.12■■□□□ 1.77
SCARB1-211ENST00000546215 GRIN3BO60391 1043 aa26.12■■□□□ 1.77
SCARB1-211ENST00000546215 RRP1P56182 461 aaKnown RBP26.12■■□□□ 1.77
SCARB1-211ENST00000546215 FAM161AQ3B820 660 aa26.12■■□□□ 1.77
SCARB1-211ENST00000546215 RABL6Q3YEC7 729 aaPredicted RBP26.12■■□□□ 1.77
SCARB1-211ENST00000546215 PPEF1O14829 653 aaPredicted RBP26.11■■□□□ 1.77
SCARB1-211ENST00000546215 ANKRD44Q8N8A2 993 aa26.11■■□□□ 1.77
SCARB1-211ENST00000546215 ZBTB7BO15156 539 aaPredicted RBP26.1■■□□□ 1.77
SCARB1-211ENST00000546215 RPS8P62241 208 aaKnown RBP26.1■■□□□ 1.77
SCARB1-211ENST00000546215 ITGA6P23229 1130 aa26.09■■□□□ 1.77
SCARB1-211ENST00000546215 OLFM4Q6UX06 510 aa26.09■■□□□ 1.77
SCARB1-211ENST00000546215 SLC51AQ86UW1 340 aa26.09■■□□□ 1.77
SCARB1-211ENST00000546215 HDAC5Q9UQL6 1122 aa26.09■■□□□ 1.77
SCARB1-211ENST00000546215 COG6Q9Y2V7 657 aa26.09■■□□□ 1.77
SCARB1-211ENST00000546215 LRRFIP2Q9Y608 721 aaKnown RBP26.09■■□□□ 1.77
SCARB1-211ENST00000546215 MVPQ14764 893 aaKnown RBP26.08■■□□□ 1.77
SCARB1-211ENST00000546215 CDC5LQ99459 802 aaKnown RBP26.07■■□□□ 1.76
SCARB1-211ENST00000546215 CHMP3Q9Y3E7 222 aa26.07■■□□□ 1.76
SCARB1-211ENST00000546215 ATP6V0A2Q9Y487 856 aa26.07■■□□□ 1.76
SCARB1-211ENST00000546215 IFIT5Q13325 482 aaKnown RBP26.07■■□□□ 1.76
SCARB1-211ENST00000546215 SOGA3Q5TF21 947 aa26.07■■□□□ 1.76
SCARB1-211ENST00000546215 ARHGAP27Q6ZUM4 889 aa26.06■■□□□ 1.76
SCARB1-211ENST00000546215 TMC4Q7Z404 712 aa26.06■■□□□ 1.76
SCARB1-211ENST00000546215 ANKRD18AQ8IVF6 992 aa26.06■■□□□ 1.76
SCARB1-211ENST00000546215 SP8Q8IXZ3 490 aa26.06■■□□□ 1.76
SCARB1-211ENST00000546215 ANKRD18BA2A2Z9 1011 aa26.05■■□□□ 1.76
SCARB1-211ENST00000546215 GNAI2P04899 355 aa26.05■■□□□ 1.76
SCARB1-211ENST00000546215 CCDC93Q567U6 631 aa26.05■■□□□ 1.76
SCARB1-211ENST00000546215 CC2D2BQ6DHV5 1058 aa26.05■■□□□ 1.76
SCARB1-211ENST00000546215 SNED1Q8TER0 1413 aa26.05■■□□□ 1.76
SCARB1-211ENST00000546215 CCDC57Q2TAC2 916 aa26.04■■□□□ 1.76
SCARB1-211ENST00000546215 DDX19BQ9UMR2 479 aa26.04■■□□□ 1.76
SCARB1-211ENST00000546215 FER1L6Q2WGJ9 1857 aa26.04■■□□□ 1.76
SCARB1-211ENST00000546215 NFKBIEO00221 500 aa26.03■■□□□ 1.76
SCARB1-211ENST00000546215 BSDC1Q9NW68 430 aaPredicted RBP26.03■■□□□ 1.76
SCARB1-211ENST00000546215 RTKN2Q8IZC4 609 aa26.02■■□□□ 1.76
SCARB1-211ENST00000546215 SUPT16HQ9Y5B9 1047 aaKnown RBP26.02■■□□□ 1.76
SCARB1-211ENST00000546215 LRRC37AA6NMS7 1700 aa26.01■■□□□ 1.75
SCARB1-211ENST00000546215 IGHMBP2P38935 993 aaKnown RBP26.01■■□□□ 1.75
SCARB1-211ENST00000546215 TMX4Q9H1E5 349 aaPredicted RBP26.01■■□□□ 1.75
SCARB1-211ENST00000546215 GRIPAP1Q4V328 841 aa26■■□□□ 1.75
SCARB1-211ENST00000546215 ZNF594Q96JF6 807 aaPredicted RBP26■■□□□ 1.75
SCARB1-211ENST00000546215 SPEF2Q9C093 1822 aa26■■□□□ 1.75
SCARB1-211ENST00000546215 MTX1Q13505 466 aa25.99■■□□□ 1.75
SCARB1-211ENST00000546215 ZBTB40Q9NUA8 1239 aa25.99■■□□□ 1.75
SCARB1-211ENST00000546215 LTBP3Q9NS15 1303 aa25.99■■□□□ 1.75
SCARB1-211ENST00000546215 RFX5P48382 616 aaPredicted RBP25.99■■□□□ 1.75
SCARB1-211ENST00000546215 RASSF7Q02833 373 aa25.99■■□□□ 1.75
SCARB1-211ENST00000546215 MPHOSPH8Q99549 860 aa25.99■■□□□ 1.75
SCARB1-211ENST00000546215 C1orf115Q9H7X2 142 aa25.99■■□□□ 1.75
SCARB1-211ENST00000546215 TAF7LQ5H9L4 462 aa25.98■■□□□ 1.75
SCARB1-211ENST00000546215 TAOK3Q9H2K8 898 aa25.98■■□□□ 1.75
SCARB1-211ENST00000546215 MINPP1Q9UNW1 487 aa25.98■■□□□ 1.75
SCARB1-211ENST00000546215 PRELPP51888 382 aa25.97■■□□□ 1.75
SCARB1-211ENST00000546215 FKBP4Q02790 459 aaKnown RBP eCLIP25.97■■□□□ 1.75
SCARB1-211ENST00000546215 MPNDQ8N594 471 aa25.97■■□□□ 1.75
SCARB1-211ENST00000546215 PSMD1Q99460 953 aa25.97■■□□□ 1.75
SCARB1-211ENST00000546215 CHMP4BQ9H444 224 aaKnown RBP25.97■■□□□ 1.75
SCARB1-211ENST00000546215 GPSM2P81274 684 aa25.96■■□□□ 1.75
SCARB1-211ENST00000546215 LDHAL6AQ6ZMR3 332 aa25.96■■□□□ 1.75
SCARB1-211ENST00000546215 KLHDC4Q8TBB5 520 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1443 ms