RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	BICD2	Q8TD16	824 aa		11.84	□□□□□ -0.51
UBC-213	ENST00000546120	SSH3	Q8TE77	659 aa		11.84	□□□□□ -0.51
UBC-213	ENST00000546120	PPP1R13B	Q96KQ4	1090 aa		11.84	□□□□□ -0.51
UBC-213	ENST00000546120	NRBP1	Q9UHY1	535 aa		11.84	□□□□□ -0.51
UBC-213	ENST00000546120	RCOR1	Q9UKL0	485 aa		11.84	□□□□□ -0.51
UBC-213	ENST00000546120	EDC4	Q6P2E9	1401 aa	Known RBP	11.84	□□□□□ -0.51
UBC-213	ENST00000546120	ZBTB22	O15209	634 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	USP5	P45974	858 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	FAM160A1	Q05DH4	1040 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	SPATS2	Q86XZ4	545 aa	Known RBP	11.83	□□□□□ -0.52
UBC-213	ENST00000546120	HOMER1	Q86YM7	354 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	CTCFL	Q8NI51	663 aa	Predicted RBP	11.83	□□□□□ -0.52
UBC-213	ENST00000546120	GOLGA1	Q92805	767 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	MEIS3	Q99687	375 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	ATG3	Q9NT62	314 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	ADAM21	Q9UKJ8	722 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	CD163L1	Q9NR16	1453 aa		11.83	□□□□□ -0.52
UBC-213	ENST00000546120	SBNO1	A3KN83	1393 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120		A0A087WUV0	522 aa	Predicted RBP	11.82	□□□□□ -0.52
UBC-213	ENST00000546120		A0A1W2PQ27	194 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120		A0A1W2PQ64	194 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120		A0A1W2PQD8	194 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	MAP2K7	O14733	419 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	ARHGAP6	O43182	974 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	SRGAP3	O43295	1099 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	APP	P05067	770 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	LIG1	P18858	919 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	OAS2	P29728	719 aa	Known RBP	11.82	□□□□□ -0.52
UBC-213	ENST00000546120	TXLNA	P40222	546 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	GSC	P56915	257 aa	Predicted RBP	11.82	□□□□□ -0.52
UBC-213	ENST00000546120	CORO7	P57737	925 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	SET	Q01105	290 aa	Predicted RBP	11.82	□□□□□ -0.52
UBC-213	ENST00000546120	CCDC144B	Q3MJ40	725 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	HSP90B2P	Q58FF3	399 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	CCDC30	Q5VVM6	783 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	MMS22L	Q6ZRQ5	1243 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	CCAR1	Q8IX12	1150 aa	Known RBP	11.82	□□□□□ -0.52
UBC-213	ENST00000546120	CCDC144CP	Q8IYA2	1237 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	CEP112	Q8N8E3	955 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	DNAJC25	Q9H1X3	360 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	VIPAS39	Q9H9C1	493 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	CABP2	Q9NPB3	220 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	PIK3C2B	O00750	1634 aa		11.82	□□□□□ -0.52
UBC-213	ENST00000546120	SLC4A2	P04920	1241 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	HMGB1	P09429	215 aa	Known RBP	11.81	□□□□□ -0.52
UBC-213	ENST00000546120	MAP3K9	P80192	1104 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	GORAB	Q5T7V8	394 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	E4F1	Q66K89	784 aa	Predicted RBP	11.81	□□□□□ -0.52
UBC-213	ENST00000546120	MCTP2	Q6DN12	878 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	FAM71B	Q8TC56	605 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	STAG1	Q8WVM7	1258 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	GTF3C6	Q969F1	213 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	EVI5L	Q96CN4	794 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	CHAMP1	Q96JM3	812 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	A1CF	Q9NQ94	594 aa	Known RBP	11.81	□□□□□ -0.52
UBC-213	ENST00000546120	RBM28	Q9NW13	759 aa	Known RBP	11.81	□□□□□ -0.52
UBC-213	ENST00000546120	CEP83	Q9Y592	693 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	CHD2	O14647	1828 aa	Known RBP	11.81	□□□□□ -0.52
UBC-213	ENST00000546120	DLC1	Q96QB1	1528 aa		11.81	□□□□□ -0.52
UBC-213	ENST00000546120	ZBTB7C	A1YPR0	619 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	TBC1D8	O95759	1140 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	CCDC172	P0C7W6	258 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	NECTIN1	Q15223	517 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	DNAJC21	Q5F1R6	531 aa	Known RBP	11.8	□□□□□ -0.52
UBC-213	ENST00000546120	RSRC2	Q7L4I2	434 aa	Known RBP	11.8	□□□□□ -0.52
UBC-213	ENST00000546120	CCDC83	Q8IWF9	413 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.8	□□□□□ -0.52
UBC-213	ENST00000546120	C10orf67	Q8IYJ2	551 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	ZFP91	Q96JP5	570 aa	Predicted RBP	11.8	□□□□□ -0.52
UBC-213	ENST00000546120	PHACTR3	Q96KR7	559 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	DONSON	Q9NYP3	566 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	KIF20B	Q96Q89	1820 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	TUBGCP6	Q96RT7	1819 aa		11.8	□□□□□ -0.52
UBC-213	ENST00000546120	MROH2A	A6NES4	1674 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	STX10	O60499	249 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	PPFIA4	O75335	1185 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	PSEN1	P49768	467 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	POLA2	Q14181	598 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	NAA30	Q147X3	362 aa	Predicted RBP	11.79	□□□□□ -0.52
UBC-213	ENST00000546120	CAMK4	Q16566	473 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.79	□□□□□ -0.52
UBC-213	ENST00000546120	NBPF11	Q86T75	865 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	POTED	Q86YR6	584 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	CKAP2L	Q8IYA6	745 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	SMARCE1	Q969G3	411 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	JAKMIP1	Q96N16	626 aa	Known RBP	11.79	□□□□□ -0.52
UBC-213	ENST00000546120	FUT8	Q9BYC5	575 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	TMX1	Q9H3N1	280 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	RAB21	Q9UL25	225 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.79	□□□□□ -0.52
UBC-213	ENST00000546120	ERBB3	P21860	1342 aa		11.79	□□□□□ -0.52
UBC-213	ENST00000546120	ATXN2	Q99700	1313 aa	Known RBP	11.79	□□□□□ -0.52
UBC-213	ENST00000546120	ITSN1	Q15811	1721 aa		11.78	□□□□□ -0.52
UBC-213	ENST00000546120	TMCO5B	A8MYB1	307 aa		11.78	□□□□□ -0.52
UBC-213	ENST00000546120	ATP6V1A	P38606	617 aa		11.78	□□□□□ -0.52
UBC-213	ENST00000546120	EVC	P57679	992 aa		11.78	□□□□□ -0.52
UBC-213	ENST00000546120	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.78	□□□□□ -0.52
UBC-213	ENST00000546120	MAP9	Q49MG5	647 aa		11.78	□□□□□ -0.52
UBC-213	ENST00000546120	BLOC1S2	Q6QNY1	142 aa		11.78	□□□□□ -0.52
UBC-213	ENST00000546120	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.78	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms