RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 GREM2Q9H772 168 aa21.25■□□□□ 0.99
CADM1-220ENST00000546000 PA2G4Q9UQ80 394 aaKnown RBP21.25■□□□□ 0.99
CADM1-220ENST00000546000 COL11A2P13942 1736 aaPredicted RBP21.24■□□□□ 0.99
CADM1-220ENST00000546000 ST5P78524 1137 aa21.24■□□□□ 0.99
CADM1-220ENST00000546000 POLA2Q14181 598 aa21.24■□□□□ 0.99
CADM1-220ENST00000546000 TTLL11Q8NHH1 800 aa21.24■□□□□ 0.99
CADM1-220ENST00000546000 RFX5P48382 616 aaPredicted RBP21.23■□□□□ 0.99
CADM1-220ENST00000546000 HDAC1Q13547 482 aaPredicted RBP21.23■□□□□ 0.99
CADM1-220ENST00000546000 SLC10A5Q5PT55 438 aa21.23■□□□□ 0.99
CADM1-220ENST00000546000 SSH3Q8TE77 659 aa21.23■□□□□ 0.99
CADM1-220ENST00000546000 MTFR1LQ9H019 292 aa21.23■□□□□ 0.99
CADM1-220ENST00000546000 HDAC5Q9UQL6 1122 aa21.23■□□□□ 0.99
CADM1-220ENST00000546000 KDM2BQ8NHM5 1336 aa21.23■□□□□ 0.99
CADM1-220ENST00000546000 RIC1Q4ADV7 1423 aa21.22■□□□□ 0.99
CADM1-220ENST00000546000 CSF1RP07333 972 aa21.22■□□□□ 0.99
CADM1-220ENST00000546000 ZNF594Q96JF6 807 aaPredicted RBP21.22■□□□□ 0.99
CADM1-220ENST00000546000 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
CADM1-220ENST00000546000 SEC31BQ9NQW1 1179 aa21.21■□□□□ 0.99
CADM1-220ENST00000546000 EXOC6BQ9Y2D4 811 aa21.21■□□□□ 0.99
CADM1-220ENST00000546000 TAF1P21675 1872 aa21.21■□□□□ 0.99
CADM1-220ENST00000546000 C10orf71Q711Q0 1435 aa21.21■□□□□ 0.99
CADM1-220ENST00000546000 SLC51AQ86UW1 340 aa21.2■□□□□ 0.98
CADM1-220ENST00000546000 SIL1Q9H173 461 aa21.2■□□□□ 0.98
CADM1-220ENST00000546000 RWDD1Q9H446 243 aaPredicted RBP21.2■□□□□ 0.98
CADM1-220ENST00000546000 APBB1O00213 710 aa21.19■□□□□ 0.98
CADM1-220ENST00000546000 HMMRO75330 724 aa21.19■□□□□ 0.98
CADM1-220ENST00000546000 ITGA6P23229 1130 aa21.19■□□□□ 0.98
CADM1-220ENST00000546000 SKAP1Q86WV1 359 aa21.19■□□□□ 0.98
CADM1-220ENST00000546000 PTPN12Q05209 780 aaKnown RBP21.18■□□□□ 0.98
CADM1-220ENST00000546000 SF3B3Q15393 1217 aaKnown RBP21.18■□□□□ 0.98
CADM1-220ENST00000546000 CCDC152Q4G0S7 254 aa21.18■□□□□ 0.98
CADM1-220ENST00000546000 NLRP3Q96P20 1036 aa21.18■□□□□ 0.98
CADM1-220ENST00000546000 SGIP1Q9BQI5 828 aa21.18■□□□□ 0.98
CADM1-220ENST00000546000 RTL9Q8NET4 1388 aa21.16■□□□□ 0.98
CADM1-220ENST00000546000 PTGER2P43116 358 aa21.16■□□□□ 0.98
CADM1-220ENST00000546000 IFIT5Q13325 482 aaKnown RBP21.16■□□□□ 0.98
CADM1-220ENST00000546000 CCDC57Q2TAC2 916 aa21.16■□□□□ 0.98
CADM1-220ENST00000546000 PUS3Q9BZE2 481 aaKnown RBP21.16■□□□□ 0.98
CADM1-220ENST00000546000 ANKRD18BA2A2Z9 1011 aa21.15■□□□□ 0.98
CADM1-220ENST00000546000 SURF6O75683 361 aaKnown RBP21.15■□□□□ 0.98
CADM1-220ENST00000546000 HSP90B1P14625 803 aaKnown RBP21.15■□□□□ 0.98
CADM1-220ENST00000546000 POLD1P28340 1107 aa21.15■□□□□ 0.98
CADM1-220ENST00000546000 CENPQQ7L2Z9 268 aaPredicted RBP21.15■□□□□ 0.98
CADM1-220ENST00000546000 BRIP1Q9BX63 1249 aa21.15■□□□□ 0.98
CADM1-220ENST00000546000 DCTPP1Q9H773 170 aa21.15■□□□□ 0.98
CADM1-220ENST00000546000 CRY2Q49AN0 593 aa21.14■□□□□ 0.97
CADM1-220ENST00000546000 LRRC24Q50LG9 513 aa21.14■□□□□ 0.97
CADM1-220ENST00000546000 TAF7LQ5H9L4 462 aa21.14■□□□□ 0.97
CADM1-220ENST00000546000 SMC5Q8IY18 1101 aa21.14■□□□□ 0.97
CADM1-220ENST00000546000 CELF1Q92879 486 aaKnown RBP21.14■□□□□ 0.97
CADM1-220ENST00000546000 BCL11AQ9H165 835 aa21.14■□□□□ 0.97
CADM1-220ENST00000546000 COPRSQ9NQ92 184 aa21.14■□□□□ 0.97
CADM1-220ENST00000546000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.14■□□□□ 0.97
CADM1-220ENST00000546000 KIAA1551Q9HCM1 1747 aa21.14■□□□□ 0.97
CADM1-220ENST00000546000 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
CADM1-220ENST00000546000 CHRNA5P30532 468 aa21.13■□□□□ 0.97
CADM1-220ENST00000546000 KIF13BQ9NQT8 1826 aa21.13■□□□□ 0.97
CADM1-220ENST00000546000 OS9Q13438 667 aaPredicted RBP21.12■□□□□ 0.97
CADM1-220ENST00000546000 C2CD5Q86YS7 1000 aa21.12■□□□□ 0.97
CADM1-220ENST00000546000 RPGRQ92834 1020 aaKnown RBP21.12■□□□□ 0.97
CADM1-220ENST00000546000 NOP58Q9Y2X3 529 aaKnown RBP21.12■□□□□ 0.97
CADM1-220ENST00000546000 KLRG2A4D1S0 409 aaPredicted RBP21.11■□□□□ 0.97
CADM1-220ENST00000546000 ATG9AQ7Z3C6 839 aa21.11■□□□□ 0.97
CADM1-220ENST00000546000 KLHL34Q8N239 644 aa21.11■□□□□ 0.97
CADM1-220ENST00000546000 PDZRN3Q9UPQ7 1066 aa21.11■□□□□ 0.97
CADM1-220ENST00000546000 CACNA1SQ13698 1873 aa21.11■□□□□ 0.97
CADM1-220ENST00000546000 A0A1B0GUL6 1792 aa21.1■□□□□ 0.97
CADM1-220ENST00000546000 DDX46Q7L014 1031 aaKnown RBP21.1■□□□□ 0.97
CADM1-220ENST00000546000 GCC1Q96CN9 775 aa21.1■□□□□ 0.97
CADM1-220ENST00000546000 EYA2O00167 538 aa21.09■□□□□ 0.97
CADM1-220ENST00000546000 SASH1O94885 1247 aa21.09■□□□□ 0.97
CADM1-220ENST00000546000 SRGNP10124 158 aa21.09■□□□□ 0.97
CADM1-220ENST00000546000 PDE6BP35913 854 aa21.09■□□□□ 0.97
CADM1-220ENST00000546000 ANKRD45Q5TZF3 282 aa21.09■□□□□ 0.97
CADM1-220ENST00000546000 CDC5LQ99459 802 aaKnown RBP21.09■□□□□ 0.97
CADM1-220ENST00000546000 IL1RAPL2Q9NP60 686 aa21.09■□□□□ 0.97
CADM1-220ENST00000546000 DLEC1Q9Y238 1755 aa21.09■□□□□ 0.97
CADM1-220ENST00000546000 G3BP1Q13283 466 aaKnown RBP eCLIP21.08■□□□□ 0.97
CADM1-220ENST00000546000 GRAPQ13588 217 aa21.08■□□□□ 0.97
CADM1-220ENST00000546000 ANKRD18AQ8IVF6 992 aa21.08■□□□□ 0.97
CADM1-220ENST00000546000 GRAPLQ8TC17 118 aaPredicted RBP21.08■□□□□ 0.97
CADM1-220ENST00000546000 LNPKQ9C0E8 428 aa21.08■□□□□ 0.97
CADM1-220ENST00000546000 SPON1Q9HCB6 807 aa21.08■□□□□ 0.97
CADM1-220ENST00000546000 CNNM1Q9NRU3 951 aa21.08■□□□□ 0.97
CADM1-220ENST00000546000 PPP1R1BQ9UD71 204 aaPredicted RBP21.08■□□□□ 0.97
CADM1-220ENST00000546000 IGHMBP2P38935 993 aaKnown RBP21.07■□□□□ 0.96
CADM1-220ENST00000546000 NUCB1Q02818 461 aa21.07■□□□□ 0.96
CADM1-220ENST00000546000 TFCP2Q12800 502 aa21.07■□□□□ 0.96
CADM1-220ENST00000546000 LDHAL6AQ6ZMR3 332 aa21.07■□□□□ 0.96
CADM1-220ENST00000546000 RBM17Q96I25 401 aaKnown RBP21.07■□□□□ 0.96
CADM1-220ENST00000546000 NPR1P16066 1061 aa21.06■□□□□ 0.96
CADM1-220ENST00000546000 DPEP1P16444 411 aa21.06■□□□□ 0.96
CADM1-220ENST00000546000 PDE4AP27815 886 aa21.06■□□□□ 0.96
CADM1-220ENST00000546000 HOXA10P31260 410 aaPredicted RBP21.06■□□□□ 0.96
CADM1-220ENST00000546000 RHPN1Q8TCX5 695 aa21.06■□□□□ 0.96
CADM1-220ENST00000546000 OTUD7AQ8TE49 926 aaPredicted RBP21.06■□□□□ 0.96
CADM1-220ENST00000546000 ZNF622Q969S3 477 aaKnown RBP eCLIP21.06■□□□□ 0.96
CADM1-220ENST00000546000 WWC3Q9ULE0 1092 aa21.06■□□□□ 0.96
CADM1-220ENST00000546000 RIPOR2Q9Y4F9 1068 aa21.06■□□□□ 0.96
CADM1-220ENST00000546000 LRRC37AA6NMS7 1700 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms