RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-208ENST00000545831 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
NPIPA1-208ENST00000545831 TTLL11Q8NHH1 800 aa12.43□□□□□ -0.42
NPIPA1-208ENST00000545831 NLRP3Q96P20 1036 aa12.43□□□□□ -0.42
NPIPA1-208ENST00000545831 COPRSQ9NQ92 184 aa12.43□□□□□ -0.42
NPIPA1-208ENST00000545831 PARP3Q9Y6F1 533 aa12.43□□□□□ -0.42
NPIPA1-208ENST00000545831 APBB1O00213 710 aa12.42□□□□□ -0.42
NPIPA1-208ENST00000545831 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
NPIPA1-208ENST00000545831 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
NPIPA1-208ENST00000545831 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
NPIPA1-208ENST00000545831 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
NPIPA1-208ENST00000545831 POLRMTO00411 1230 aaKnown RBP12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 ITGA6P23229 1130 aa12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 LNPKQ9C0E8 428 aa12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 PA2G4Q9UQ80 394 aaKnown RBP12.41□□□□□ -0.42
NPIPA1-208ENST00000545831 TUBGCP6Q96RT7 1819 aa12.4□□□□□ -0.42
NPIPA1-208ENST00000545831 MMP10P09238 476 aa12.4□□□□□ -0.42
NPIPA1-208ENST00000545831 DDR1Q08345 913 aa12.4□□□□□ -0.42
NPIPA1-208ENST00000545831 MSL1Q68DK7 614 aa12.4□□□□□ -0.42
NPIPA1-208ENST00000545831 PRR5LQ6MZQ0 368 aa12.4□□□□□ -0.42
NPIPA1-208ENST00000545831 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
NPIPA1-208ENST00000545831 SIL1Q9H173 461 aa12.4□□□□□ -0.42
NPIPA1-208ENST00000545831 GREM2Q9H772 168 aa12.4□□□□□ -0.42
NPIPA1-208ENST00000545831 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.43
NPIPA1-208ENST00000545831 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.43
NPIPA1-208ENST00000545831 EYA2O00167 538 aa12.39□□□□□ -0.43
NPIPA1-208ENST00000545831 CIAO1O76071 339 aa12.39□□□□□ -0.43
NPIPA1-208ENST00000545831 RGS3P49796 1198 aa12.39□□□□□ -0.43
NPIPA1-208ENST00000545831 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
NPIPA1-208ENST00000545831 KLHDC4Q8TBB5 520 aa12.39□□□□□ -0.43
NPIPA1-208ENST00000545831 CDC5LQ99459 802 aaKnown RBP12.39□□□□□ -0.43
NPIPA1-208ENST00000545831 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
NPIPA1-208ENST00000545831 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
NPIPA1-208ENST00000545831 SMARCA5O60264 1052 aaPredicted RBP12.38□□□□□ -0.43
NPIPA1-208ENST00000545831 IGHMBP2P38935 993 aaKnown RBP12.38□□□□□ -0.43
NPIPA1-208ENST00000545831 IL15P40933 162 aaPredicted RBP12.38□□□□□ -0.43
NPIPA1-208ENST00000545831 LDHAL6AQ6ZMR3 332 aa12.38□□□□□ -0.43
NPIPA1-208ENST00000545831 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
NPIPA1-208ENST00000545831 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
NPIPA1-208ENST00000545831 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
NPIPA1-208ENST00000545831 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
NPIPA1-208ENST00000545831 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
NPIPA1-208ENST00000545831 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
NPIPA1-208ENST00000545831 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
NPIPA1-208ENST00000545831 BRIP1Q9BX63 1249 aa12.37□□□□□ -0.43
NPIPA1-208ENST00000545831 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
NPIPA1-208ENST00000545831 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
NPIPA1-208ENST00000545831 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
NPIPA1-208ENST00000545831 LAMB2P55268 1798 aa12.36□□□□□ -0.43
NPIPA1-208ENST00000545831 SASH1O94885 1247 aa12.36□□□□□ -0.43
NPIPA1-208ENST00000545831 ILDR2Q71H61 639 aa12.36□□□□□ -0.43
NPIPA1-208ENST00000545831 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
NPIPA1-208ENST00000545831 SEC31BQ9NQW1 1179 aa12.36□□□□□ -0.43
NPIPA1-208ENST00000545831 MYH3P11055 1940 aa12.36□□□□□ -0.43
NPIPA1-208ENST00000545831 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
NPIPA1-208ENST00000545831 IFIT2P09913 472 aaKnown RBP12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 PDE4AP27815 886 aa12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 PDE6BP35913 854 aa12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 R3HDM1Q15032 1099 aaKnown RBP12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 PUS3Q9BZE2 481 aaKnown RBP12.35□□□□□ -0.43
NPIPA1-208ENST00000545831 POLD1P28340 1107 aa12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 TFCP2Q12800 502 aa12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 C16orf71Q8IYS4 520 aaPredicted RBP12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 PDGFDQ9GZP0 370 aaPredicted RBP12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 GPR108Q9NPR9 543 aa12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 AKAP2Q9Y2D5 859 aa12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 RIPOR2Q9Y4F9 1068 aa12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 MROH5Q6ZUA9 1318 aa12.34□□□□□ -0.43
NPIPA1-208ENST00000545831 KLRG2A4D1S0 409 aaPredicted RBP12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 GRAPQ13588 217 aa12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 CRY2Q49AN0 593 aa12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 TNNI3KQ59H18 835 aa12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 AACSQ86V21 672 aa12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 GRAPLQ8TC17 118 aaPredicted RBP12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 GPATCH3Q96I76 525 aa12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 FPGT-TNNI3KV9GXZ4 949 aa12.33□□□□□ -0.44
NPIPA1-208ENST00000545831 EP400Q96L91 3159 aa12.32□□□□□ -0.44
NPIPA1-208ENST00000545831 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
NPIPA1-208ENST00000545831 CRAMP1Q96RY5 1269 aa12.32□□□□□ -0.44
NPIPA1-208ENST00000545831 NRXN2Q9P2S2 1712 aa12.31□□□□□ -0.44
NPIPA1-208ENST00000545831 NPR1P16066 1061 aa12.31□□□□□ -0.44
NPIPA1-208ENST00000545831 MX1P20591 662 aa12.31□□□□□ -0.44
NPIPA1-208ENST00000545831 HOXA10P31260 410 aaPredicted RBP12.31□□□□□ -0.44
NPIPA1-208ENST00000545831 PDE1AP54750 535 aa12.31□□□□□ -0.44
NPIPA1-208ENST00000545831 CELF1Q92879 486 aaKnown RBP12.31□□□□□ -0.44
NPIPA1-208ENST00000545831 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms