RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 GRM8O00222 908 aa17.43■□□□□ 0.38
TSEN54-203ENST00000545228 IGKV5-2P06315 115 aa17.43■□□□□ 0.38
TSEN54-203ENST00000545228 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
TSEN54-203ENST00000545228 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
TSEN54-203ENST00000545228 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
TSEN54-203ENST00000545228 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
TSEN54-203ENST00000545228 CCDC24Q8N4L8 307 aa17.42■□□□□ 0.38
TSEN54-203ENST00000545228 GNAI3P08754 354 aa17.41■□□□□ 0.38
TSEN54-203ENST00000545228 SLC10A5Q5PT55 438 aa17.41■□□□□ 0.38
TSEN54-203ENST00000545228 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
TSEN54-203ENST00000545228 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
TSEN54-203ENST00000545228 C21orf2O43822 256 aa17.4■□□□□ 0.38
TSEN54-203ENST00000545228 PDE8AO60658 829 aa17.4■□□□□ 0.38
TSEN54-203ENST00000545228 ERFEQ4G0M1 354 aa17.4■□□□□ 0.38
TSEN54-203ENST00000545228 UBE3BQ7Z3V4 1068 aa17.4■□□□□ 0.38
TSEN54-203ENST00000545228 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
TSEN54-203ENST00000545228 JMYQ8N9B5 988 aa17.4■□□□□ 0.38
TSEN54-203ENST00000545228 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
TSEN54-203ENST00000545228 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
TSEN54-203ENST00000545228 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
TSEN54-203ENST00000545228 TIAM2Q8IVF5 1701 aa17.4■□□□□ 0.38
TSEN54-203ENST00000545228 UBTFL1P0CB47 393 aaPredicted RBP17.39■□□□□ 0.37
TSEN54-203ENST00000545228 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
TSEN54-203ENST00000545228 ITPRIPQ8IWB1 547 aa17.39■□□□□ 0.37
TSEN54-203ENST00000545228 CNKSR1Q969H4 720 aa17.39■□□□□ 0.37
TSEN54-203ENST00000545228 CLUAP1Q96AJ1 413 aa17.39■□□□□ 0.37
TSEN54-203ENST00000545228 DDX19BQ9UMR2 479 aa17.39■□□□□ 0.37
TSEN54-203ENST00000545228 CACNA1SQ13698 1873 aa17.39■□□□□ 0.37
TSEN54-203ENST00000545228 COL11A2P13942 1736 aaPredicted RBP17.38■□□□□ 0.37
TSEN54-203ENST00000545228 H7C1W4 665 aa17.38■□□□□ 0.37
TSEN54-203ENST00000545228 CCDC152Q4G0S7 254 aa17.38■□□□□ 0.37
TSEN54-203ENST00000545228 UTYO14607 1347 aa17.38■□□□□ 0.37
TSEN54-203ENST00000545228 ABCC12Q96J65 1359 aa17.38■□□□□ 0.37
TSEN54-203ENST00000545228 NPR1P16066 1061 aa17.37■□□□□ 0.37
TSEN54-203ENST00000545228 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
TSEN54-203ENST00000545228 STYK1Q6J9G0 422 aa17.37■□□□□ 0.37
TSEN54-203ENST00000545228 MASTLQ96GX5 879 aa17.37■□□□□ 0.37
TSEN54-203ENST00000545228 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
TSEN54-203ENST00000545228 PLA2G12BQ9BX93 195 aa17.37■□□□□ 0.37
TSEN54-203ENST00000545228 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
TSEN54-203ENST00000545228 TAOK3Q9H2K8 898 aa17.37■□□□□ 0.37
TSEN54-203ENST00000545228 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
TSEN54-203ENST00000545228 KLRG2A4D1S0 409 aaPredicted RBP17.36■□□□□ 0.37
TSEN54-203ENST00000545228 SRGNP10124 158 aa17.36■□□□□ 0.37
TSEN54-203ENST00000545228 SOGA3Q5TF21 947 aa17.36■□□□□ 0.37
TSEN54-203ENST00000545228 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
TSEN54-203ENST00000545228 TMEM57Q8N5G2 664 aa17.36■□□□□ 0.37
TSEN54-203ENST00000545228 LTBP3Q9NS15 1303 aa17.36■□□□□ 0.37
TSEN54-203ENST00000545228 CTSWP56202 376 aa17.35■□□□□ 0.37
TSEN54-203ENST00000545228 MVPQ14764 893 aaKnown RBP17.35■□□□□ 0.37
TSEN54-203ENST00000545228 CRY2Q49AN0 593 aa17.35■□□□□ 0.37
TSEN54-203ENST00000545228 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
TSEN54-203ENST00000545228 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
TSEN54-203ENST00000545228 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
TSEN54-203ENST00000545228 FER1L6Q2WGJ9 1857 aa17.35■□□□□ 0.37
TSEN54-203ENST00000545228 POTECB2RU33 542 aa17.34■□□□□ 0.37
TSEN54-203ENST00000545228 HCLS1P14317 486 aaPredicted RBP17.34■□□□□ 0.37
TSEN54-203ENST00000545228 SF3B3Q15393 1217 aaKnown RBP17.34■□□□□ 0.37
TSEN54-203ENST00000545228 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
TSEN54-203ENST00000545228 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
TSEN54-203ENST00000545228 AAMPQ13685 434 aa17.33■□□□□ 0.36
TSEN54-203ENST00000545228 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
TSEN54-203ENST00000545228 PLIN1O60240 522 aa17.32■□□□□ 0.36
TSEN54-203ENST00000545228 GNAI2P04899 355 aa17.32■□□□□ 0.36
TSEN54-203ENST00000545228 GRIPAP1Q4V328 841 aa17.32■□□□□ 0.36
TSEN54-203ENST00000545228 CRAMP1Q96RY5 1269 aa17.32■□□□□ 0.36
TSEN54-203ENST00000545228 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
TSEN54-203ENST00000545228 NBPF7P0C2Y1 421 aaPredicted RBP17.31■□□□□ 0.36
TSEN54-203ENST00000545228 HOXA10P31260 410 aaPredicted RBP17.31■□□□□ 0.36
TSEN54-203ENST00000545228 CASP7P55210 303 aa17.31■□□□□ 0.36
TSEN54-203ENST00000545228 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
TSEN54-203ENST00000545228 PANK1Q8TE04 598 aa17.31■□□□□ 0.36
TSEN54-203ENST00000545228 SLX4Q8IY92 1834 aa17.31■□□□□ 0.36
TSEN54-203ENST00000545228 DDNO94850 711 aaPredicted RBP17.3■□□□□ 0.36
TSEN54-203ENST00000545228 IFIT5Q13325 482 aaKnown RBP17.3■□□□□ 0.36
TSEN54-203ENST00000545228 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
TSEN54-203ENST00000545228 CHMP3Q9Y3E7 222 aa17.3■□□□□ 0.36
TSEN54-203ENST00000545228 SPEF2Q9C093 1822 aa17.3■□□□□ 0.36
TSEN54-203ENST00000545228 ANKRD18BA2A2Z9 1011 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 BBOX1O75936 387 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 RLBP1P12271 317 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
TSEN54-203ENST00000545228 GRAPQ13588 217 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 CCDC93Q567U6 631 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 TAF7LQ5H9L4 462 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
TSEN54-203ENST00000545228 MEIS3Q99687 375 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 COG6Q9Y2V7 657 aa17.29■□□□□ 0.36
TSEN54-203ENST00000545228 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
TSEN54-203ENST00000545228 CSF1RP07333 972 aa17.28■□□□□ 0.36
TSEN54-203ENST00000545228 CHADLQ6NUI6 762 aa17.28■□□□□ 0.36
TSEN54-203ENST00000545228 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
TSEN54-203ENST00000545228 SYNE4Q8N205 404 aa17.28■□□□□ 0.36
TSEN54-203ENST00000545228 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
TSEN54-203ENST00000545228 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
TSEN54-203ENST00000545228 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
TSEN54-203ENST00000545228 TNNQ9UQP3 1299 aa17.28■□□□□ 0.36
TSEN54-203ENST00000545228 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms