RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 PDE8AO60658 829 aa14.32□□□□□ -0.12
SRRM4-203ENST00000545224 ST5P78524 1137 aa14.32□□□□□ -0.12
SRRM4-203ENST00000545224 RABL6Q3YEC7 729 aaPredicted RBP14.32□□□□□ -0.12
SRRM4-203ENST00000545224 C9orf78Q9NZ63 289 aaPredicted RBP14.32□□□□□ -0.12
SRRM4-203ENST00000545224 CENPBP07199 599 aaPredicted RBP14.31□□□□□ -0.12
SRRM4-203ENST00000545224 ITPRIPQ8IWB1 547 aa14.31□□□□□ -0.12
SRRM4-203ENST00000545224 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
SRRM4-203ENST00000545224 TTLL11Q8NHH1 800 aa14.31□□□□□ -0.12
SRRM4-203ENST00000545224 ZBTB40Q9NUA8 1239 aa14.31□□□□□ -0.12
SRRM4-203ENST00000545224 ARFGEF1Q9Y6D6 1849 aa14.31□□□□□ -0.12
SRRM4-203ENST00000545224 BRCA1P38398 1863 aaKnown RBP14.31□□□□□ -0.12
SRRM4-203ENST00000545224 SRGNP10124 158 aa14.3□□□□□ -0.12
SRRM4-203ENST00000545224 GTF2E1P29083 439 aaPredicted RBP14.3□□□□□ -0.12
SRRM4-203ENST00000545224 ARHGAP27Q6ZUM4 889 aa14.3□□□□□ -0.12
SRRM4-203ENST00000545224 NLRP3Q96P20 1036 aa14.3□□□□□ -0.12
SRRM4-203ENST00000545224 DDX19BQ9UMR2 479 aa14.3□□□□□ -0.12
SRRM4-203ENST00000545224 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
SRRM4-203ENST00000545224 COL4A1P02462 1669 aa14.3□□□□□ -0.12
SRRM4-203ENST00000545224 COL11A2P13942 1736 aaPredicted RBP14.29□□□□□ -0.12
SRRM4-203ENST00000545224 WDR90Q96KV7 1748 aa14.29□□□□□ -0.12
SRRM4-203ENST00000545224 GNAI3P08754 354 aa14.29□□□□□ -0.12
SRRM4-203ENST00000545224 HOXA10P31260 410 aaPredicted RBP14.29□□□□□ -0.12
SRRM4-203ENST00000545224 PDE6BP35913 854 aa14.29□□□□□ -0.12
SRRM4-203ENST00000545224 CRBNQ96SW2 442 aa14.29□□□□□ -0.12
SRRM4-203ENST00000545224 SBF1O95248 1867 aa14.29□□□□□ -0.12
SRRM4-203ENST00000545224 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
SRRM4-203ENST00000545224 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
SRRM4-203ENST00000545224 DPEP1P16444 411 aa14.28□□□□□ -0.12
SRRM4-203ENST00000545224 CHRNA5P30532 468 aa14.28□□□□□ -0.12
SRRM4-203ENST00000545224 CTSWP56202 376 aa14.28□□□□□ -0.12
SRRM4-203ENST00000545224 C16orf71Q8IYS4 520 aaPredicted RBP14.28□□□□□ -0.12
SRRM4-203ENST00000545224 RTL9Q8NET4 1388 aa14.28□□□□□ -0.12
SRRM4-203ENST00000545224 RBM46Q8TBY0 533 aaKnown RBP14.28□□□□□ -0.12
SRRM4-203ENST00000545224 BICC1Q9H694 974 aaKnown RBP14.28□□□□□ -0.12
SRRM4-203ENST00000545224 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
SRRM4-203ENST00000545224 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
SRRM4-203ENST00000545224 DLEC1Q9Y238 1755 aa14.27□□□□□ -0.12
SRRM4-203ENST00000545224 HSP90B1P14625 803 aaKnown RBP14.27□□□□□ -0.13
SRRM4-203ENST00000545224 MTX1Q13505 466 aa14.27□□□□□ -0.13
SRRM4-203ENST00000545224 LMBR1LQ6UX01 489 aa14.27□□□□□ -0.13
SRRM4-203ENST00000545224 C2CD5Q86YS7 1000 aa14.27□□□□□ -0.13
SRRM4-203ENST00000545224 MYH3P11055 1940 aa14.27□□□□□ -0.13
SRRM4-203ENST00000545224 GNAI2P04899 355 aa14.26□□□□□ -0.13
SRRM4-203ENST00000545224 RFX5P48382 616 aaPredicted RBP14.26□□□□□ -0.13
SRRM4-203ENST00000545224 FSTL1Q12841 308 aa14.26□□□□□ -0.13
SRRM4-203ENST00000545224 STYK1Q6J9G0 422 aa14.26□□□□□ -0.13
SRRM4-203ENST00000545224 MASTLQ96GX5 879 aa14.26□□□□□ -0.13
SRRM4-203ENST00000545224 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
SRRM4-203ENST00000545224 GREM2Q9H772 168 aa14.26□□□□□ -0.13
SRRM4-203ENST00000545224 NMRK2Q9NPI5 230 aa14.26□□□□□ -0.13
SRRM4-203ENST00000545224 SEC31BQ9NQW1 1179 aa14.26□□□□□ -0.13
SRRM4-203ENST00000545224 H0YIN7 160 aa14.25□□□□□ -0.13
SRRM4-203ENST00000545224 NPHP1O15259 732 aa14.25□□□□□ -0.13
SRRM4-203ENST00000545224 NPR1P16066 1061 aa14.25□□□□□ -0.13
SRRM4-203ENST00000545224 EXOC6Q8TAG9 804 aa14.25□□□□□ -0.13
SRRM4-203ENST00000545224 KLRG1Q96E93 195 aa14.25□□□□□ -0.13
SRRM4-203ENST00000545224 C1orf115Q9H7X2 142 aa14.25□□□□□ -0.13
SRRM4-203ENST00000545224 TAF1P21675 1872 aa14.25□□□□□ -0.13
SRRM4-203ENST00000545224 ATP8B2P98198 1209 aa14.24□□□□□ -0.13
SRRM4-203ENST00000545224 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
SRRM4-203ENST00000545224 CCDC152Q4G0S7 254 aa14.24□□□□□ -0.13
SRRM4-203ENST00000545224 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
SRRM4-203ENST00000545224 JMYQ8N9B5 988 aa14.24□□□□□ -0.13
SRRM4-203ENST00000545224 C7orf43Q8WVR3 580 aa14.24□□□□□ -0.13
SRRM4-203ENST00000545224 CELF1Q92879 486 aaKnown RBP14.24□□□□□ -0.13
SRRM4-203ENST00000545224 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 KDM2BQ8NHM5 1336 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 ITGA6P23229 1130 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
SRRM4-203ENST00000545224 POLA2Q14181 598 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 C9orf131Q5VYM1 1079 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 CEP85Q6P2H3 762 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 SLC51AQ86UW1 340 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 RBM17Q96I25 401 aaKnown RBP14.23□□□□□ -0.13
SRRM4-203ENST00000545224 CCDC85AQ96PX6 553 aaPredicted RBP14.23□□□□□ -0.13
SRRM4-203ENST00000545224 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 HDAC5Q9UQL6 1122 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 PCDHB15Q9Y5E8 787 aa14.23□□□□□ -0.13
SRRM4-203ENST00000545224 SLX4Q8IY92 1834 aa14.22□□□□□ -0.13
SRRM4-203ENST00000545224 PTPN12Q05209 780 aaKnown RBP14.22□□□□□ -0.13
SRRM4-203ENST00000545224 GRAPQ13588 217 aa14.22□□□□□ -0.13
SRRM4-203ENST00000545224 GRAPLQ8TC17 118 aaPredicted RBP14.22□□□□□ -0.13
SRRM4-203ENST00000545224 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
SRRM4-203ENST00000545224 CHMP4BQ9H444 224 aaKnown RBP14.22□□□□□ -0.13
SRRM4-203ENST00000545224 SNED1Q8TER0 1413 aa14.22□□□□□ -0.13
SRRM4-203ENST00000545224 ALDH1B1P30837 517 aa14.21□□□□□ -0.13
SRRM4-203ENST00000545224 RPS8P62241 208 aaKnown RBP14.21□□□□□ -0.13
SRRM4-203ENST00000545224 AAMPQ13685 434 aa14.21□□□□□ -0.13
SRRM4-203ENST00000545224 DDX46Q7L014 1031 aaKnown RBP14.21□□□□□ -0.13
SRRM4-203ENST00000545224 RPAP2Q8IXW5 612 aaPredicted RBP14.21□□□□□ -0.13
SRRM4-203ENST00000545224 RPGRQ92834 1020 aaKnown RBP14.21□□□□□ -0.13
SRRM4-203ENST00000545224 CNKSR1Q969H4 720 aa14.21□□□□□ -0.13
SRRM4-203ENST00000545224 ZNF622Q969S3 477 aaKnown RBP eCLIP14.21□□□□□ -0.13
SRRM4-203ENST00000545224 BBOX1O75936 387 aa14.2□□□□□ -0.14
SRRM4-203ENST00000545224 DALRD3Q5D0E6 543 aaKnown RBP14.2□□□□□ -0.14
SRRM4-203ENST00000545224 COL13A1Q5TAT6 717 aaPredicted RBP14.2□□□□□ -0.14
SRRM4-203ENST00000545224 TTLL6Q8N841 843 aa14.2□□□□□ -0.14
SRRM4-203ENST00000545224 KLHDC4Q8TBB5 520 aa14.2□□□□□ -0.14
SRRM4-203ENST00000545224 ZNF594Q96JF6 807 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms