RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZNF790Q6PG37 636 aa6.77□□□□□ -1.32
VPS50-220ENST00000544910 ZCRB1Q8TBF4 217 aaKnown RBP6.77□□□□□ -1.32
VPS50-220ENST00000544910 ZSCAN16Q9H4T2 348 aaPredicted RBP6.77□□□□□ -1.32
VPS50-220ENST00000544910 C19orf44Q9H6X5 657 aa6.77□□□□□ -1.32
VPS50-220ENST00000544910 MAP2P11137 1827 aaKnown RBP6.77□□□□□ -1.32
VPS50-220ENST00000544910 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 Q6ZUG5 572 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 DDX46Q7L014 1031 aaKnown RBP6.77□□□□□ -1.33
VPS50-220ENST00000544910 WASF1Q92558 559 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 AIDAQ96BJ3 306 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 TMX4Q9H1E5 349 aaPredicted RBP6.77□□□□□ -1.33
VPS50-220ENST00000544910 CRB1P82279 1406 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 FSD2A1L4K1 749 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 ANKRD18BA2A2Z9 1011 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 SLC27A2O14975 620 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 DNM1Q05193 864 aaKnown RBP6.77□□□□□ -1.33
VPS50-220ENST00000544910 HSP90B2PQ58FF3 399 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 TRIM22Q8IYM9 498 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 MPHOSPH8Q99549 860 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 RBSNQ9H1K0 784 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 IDH1O75874 414 aaKnown RBP6.77□□□□□ -1.33
VPS50-220ENST00000544910 RPS6KB1P23443 525 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 IL15P40933 162 aaPredicted RBP6.77□□□□□ -1.33
VPS50-220ENST00000544910 TTF1Q15361 905 aaPredicted RBP6.77□□□□□ -1.33
VPS50-220ENST00000544910 GIMAP6Q6P9H5 292 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 ANKRD20A12PQ8NF67 263 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 PAG1Q9NWQ8 432 aa6.77□□□□□ -1.33
VPS50-220ENST00000544910 ZNF213O14771 459 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 CBFA2T2O43439 604 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 KCNQ3O43525 872 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 PIP4K2AP48426 406 aaPredicted RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 CCT2P78371 535 aaKnown RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 CCAR1Q8IX12 1150 aaKnown RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 CKAP2LQ8IYA6 745 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 PDCL2Q8N4E4 241 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 ANO10Q9NW15 660 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 DACH1Q9UI36 760 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 SMTNL1A8MU46 457 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 SLC3A2P08195 630 aaKnown RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 STX1AQ16623 288 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 TNNI3KQ59H18 835 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 MNS1Q8NEH6 495 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 C8orf76Q96K31 380 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 ORAI2Q96SN7 254 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 FPGT-TNNI3KV9GXZ4 949 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 GOLGA8BA8MQT2 603 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 BRD1O95696 1058 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 IGHMBP2P38935 993 aaKnown RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 TSR1Q2NL82 804 aaKnown RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 LMBR1LQ6UX01 489 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 ERCC4Q92889 916 aaPredicted RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 AK7Q96M32 723 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 TECPR2O15040 1411 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 NCAPD2Q15021 1401 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 VIRMAQ69YN4 1812 aaKnown RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 ADGRL3Q9HAR2 1447 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 HCLS1P14317 486 aaPredicted RBP6.76□□□□□ -1.33
VPS50-220ENST00000544910 SYT1P21579 422 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 TDO2P48775 406 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 PLBD2Q8NHP8 589 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 HELLSQ9NRZ9 838 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 PALD1Q9ULE6 856 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 PXDNLA1KZ92 1463 aa6.76□□□□□ -1.33
VPS50-220ENST00000544910 SLC5A1P13866 664 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 NPHP4O75161 1426 aaPredicted RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 RNF113AO15541 343 aaKnown RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 CPA1P15085 419 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 GUCY1B3Q02153 619 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 CCAR2Q8N163 923 aaKnown RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 BRF1Q92994 677 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 CCDC47Q96A33 483 aaKnown RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 TFIP11Q9UBB9 837 aaKnown RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 CLIP2Q9UDT6 1046 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 ZKSCAN5Q9Y2L8 839 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 GIGYF1O75420 1035 aaPredicted RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 RDXP35241 583 aaKnown RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 PDILTQ8N807 584 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 NCOA7Q8NI08 942 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 PES1O00541 588 aaKnown RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 SERPINC1P01008 464 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 ZFYP08048 801 aaPredicted RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 CDR1P51861 262 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 TCEANC2Q96MN5 208 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 LSG1Q9H089 658 aaKnown RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 TRMT112Q9UI30 125 aaKnown RBP6.75□□□□□ -1.33
VPS50-220ENST00000544910 PTPRUQ92729 1446 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 FSIP1Q8NA03 581 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 CABLES1Q8TDN4 633 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 NUP133Q8WUM0 1156 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 FAM227BQ96M60 508 aa6.75□□□□□ -1.33
VPS50-220ENST00000544910 NEURL1BA8MQ27 555 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 G3V3G9 751 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 PKP1Q13835 747 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 POLA2Q14181 598 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 GCKRQ14397 625 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 DCAF8Q5TAQ9 597 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 ANO6Q4KMQ2 910 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 GPT2Q8TD30 523 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms