RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 KCPQ6ZWJ8 1503 aa14.85□□□□□ -0.03
PAAF1-215ENST00000544909 CIAO1O76071 339 aa14.85□□□□□ -0.03
PAAF1-215ENST00000544909 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.85□□□□□ -0.03
PAAF1-215ENST00000544909 CCDC191Q8NCU4 936 aa14.85□□□□□ -0.03
PAAF1-215ENST00000544909 NSFL1CQ9UNZ2 370 aaKnown RBP14.85□□□□□ -0.03
PAAF1-215ENST00000544909 ABCC12Q96J65 1359 aa14.84□□□□□ -0.03
PAAF1-215ENST00000544909 A0A087WZG4 1122 aa14.84□□□□□ -0.03
PAAF1-215ENST00000544909 IL15P40933 162 aaPredicted RBP14.84□□□□□ -0.03
PAAF1-215ENST00000544909 ME3Q16798 604 aa14.84□□□□□ -0.03
PAAF1-215ENST00000544909 EPHA10Q5JZY3 1008 aa14.84□□□□□ -0.03
PAAF1-215ENST00000544909 BOLA2Q9H3K6 86 aa14.84□□□□□ -0.03
PAAF1-215ENST00000544909 TLR7Q9NYK1 1049 aaKnown RBP14.84□□□□□ -0.03
PAAF1-215ENST00000544909 COL5A2P05997 1499 aaPredicted RBP14.84□□□□□ -0.03
PAAF1-215ENST00000544909 KRT85P78386 507 aa14.83□□□□□ -0.04
PAAF1-215ENST00000544909 LRRFIP1Q32MZ4 808 aaKnown RBP14.83□□□□□ -0.04
PAAF1-215ENST00000544909 UBE3BQ7Z3V4 1068 aa14.83□□□□□ -0.04
PAAF1-215ENST00000544909 CCDC83Q8IWF9 413 aa14.83□□□□□ -0.04
PAAF1-215ENST00000544909 KBTBD3Q8NAB2 608 aa14.83□□□□□ -0.04
PAAF1-215ENST00000544909 SCAND2PQ9GZW5 306 aaPredicted RBP14.83□□□□□ -0.04
PAAF1-215ENST00000544909 CWC25Q9NXE8 425 aaPredicted RBP14.83□□□□□ -0.04
PAAF1-215ENST00000544909 ZKSCAN5Q9Y2L8 839 aa14.83□□□□□ -0.04
PAAF1-215ENST00000544909 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
PAAF1-215ENST00000544909 TJP1Q07157 1748 aa14.83□□□□□ -0.04
PAAF1-215ENST00000544909 TPM2P07951 284 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 ZCRB1Q8TBF4 217 aaKnown RBP14.82□□□□□ -0.04
PAAF1-215ENST00000544909 SIL1Q9H173 461 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 HELLSQ9NRZ9 838 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 OFD1O75665 1012 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 LARGE1O95461 756 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 TRIM28Q13263 835 aaKnown RBP14.82□□□□□ -0.04
PAAF1-215ENST00000544909 MCMDC2Q4G0Z9 681 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 FOXD4L5Q5VV16 416 aaPredicted RBP14.82□□□□□ -0.04
PAAF1-215ENST00000544909 FOXD4L4Q8WXT5 416 aaPredicted RBP14.82□□□□□ -0.04
PAAF1-215ENST00000544909 LLPHQ9BRT6 129 aaKnown RBP14.82□□□□□ -0.04
PAAF1-215ENST00000544909 DSCC1Q9BVC3 393 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 CARD10Q9BWT7 1032 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 TPCN1Q9ULQ1 816 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 TCHHQ07283 1943 aa14.82□□□□□ -0.04
PAAF1-215ENST00000544909 TFCP2Q12800 502 aa14.81□□□□□ -0.04
PAAF1-215ENST00000544909 FBXL16Q8N461 479 aa14.81□□□□□ -0.04
PAAF1-215ENST00000544909 CNPY2Q9Y2B0 182 aa14.81□□□□□ -0.04
PAAF1-215ENST00000544909 KIF3AQ9Y496 699 aa14.81□□□□□ -0.04
PAAF1-215ENST00000544909 FOXO4P98177 505 aa14.8□□□□□ -0.04
PAAF1-215ENST00000544909 ST3GAL1Q11201 340 aa14.8□□□□□ -0.04
PAAF1-215ENST00000544909 LARP1BQ659C4 914 aaKnown RBP14.8□□□□□ -0.04
PAAF1-215ENST00000544909 VSIG10Q8N0Z9 540 aa14.8□□□□□ -0.04
PAAF1-215ENST00000544909 TEX13AQ9BXU3 409 aaPredicted RBP14.8□□□□□ -0.04
PAAF1-215ENST00000544909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.8□□□□□ -0.04
PAAF1-215ENST00000544909 ZNF609O15014 1411 aa14.8□□□□□ -0.04
PAAF1-215ENST00000544909 ABCA3Q99758 1704 aa14.8□□□□□ -0.04
PAAF1-215ENST00000544909 XIRP1Q702N8 1843 aaKnown RBP14.8□□□□□ -0.04
PAAF1-215ENST00000544909 GADD45BO75293 160 aaPredicted RBP14.8□□□□□ -0.04
PAAF1-215ENST00000544909 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
PAAF1-215ENST00000544909 NEK1Q96PY6 1258 aa14.8□□□□□ -0.04
PAAF1-215ENST00000544909 TOB2Q14106 344 aaPredicted RBP14.79□□□□□ -0.04
PAAF1-215ENST00000544909 ATL3Q6DD88 541 aa14.79□□□□□ -0.04
PAAF1-215ENST00000544909 BRINP3Q76B58 766 aa14.79□□□□□ -0.04
PAAF1-215ENST00000544909 ZNF589Q86UQ0 364 aaPredicted RBP14.79□□□□□ -0.04
PAAF1-215ENST00000544909 GTF3C6Q969F1 213 aa14.79□□□□□ -0.04
PAAF1-215ENST00000544909 AGXT2Q9BYV1 514 aa14.79□□□□□ -0.04
PAAF1-215ENST00000544909 ANO8Q9HCE9 1232 aaPredicted RBP14.79□□□□□ -0.04
PAAF1-215ENST00000544909 SHANK3Q9BYB0 1731 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 IL2RBP14784 551 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 LMBR1LQ6UX01 489 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 CHAMP1Q96JM3 812 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 FUCA2Q9BTY2 467 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 PLA2G12BQ9BX93 195 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 ZSCAN16Q9H4T2 348 aaPredicted RBP14.78□□□□□ -0.04
PAAF1-215ENST00000544909 PRDM11Q9NQV5 511 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 NBPF26B4DH59 902 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 EYA2O00167 538 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 CAVIN2O95810 425 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 CPA1P15085 419 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 HMGN5P82970 282 aaKnown RBP14.78□□□□□ -0.04
PAAF1-215ENST00000544909 NBPF14Q5TI25 921 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 NBPF10Q6P3W6 841 aaKnown RBP14.78□□□□□ -0.04
PAAF1-215ENST00000544909 ATG9AQ7Z3C6 839 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 NBPF15Q8N660 670 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 KLHDC4Q8TBB5 520 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 NAP1L5Q96NT1 182 aaPredicted RBP14.78□□□□□ -0.04
PAAF1-215ENST00000544909 GDPD2Q9HCC8 539 aa14.78□□□□□ -0.04
PAAF1-215ENST00000544909 FIBPO43427 364 aa14.77□□□□□ -0.05
PAAF1-215ENST00000544909 TPM3P06753 285 aa14.77□□□□□ -0.05
PAAF1-215ENST00000544909 ZFYP08048 801 aaPredicted RBP14.77□□□□□ -0.05
PAAF1-215ENST00000544909 DNM1Q05193 864 aaKnown RBP14.77□□□□□ -0.05
PAAF1-215ENST00000544909 CHRNA2Q15822 529 aa14.77□□□□□ -0.05
PAAF1-215ENST00000544909 DBNDD2Q9BQY9 259 aa14.77□□□□□ -0.05
PAAF1-215ENST00000544909 DDX19AQ9NUU7 478 aaKnown RBP14.77□□□□□ -0.05
PAAF1-215ENST00000544909 VPS37CA5D8V6 355 aaPredicted RBP14.76□□□□□ -0.05
PAAF1-215ENST00000544909 CCDC192P0DO97 292 aa14.76□□□□□ -0.05
PAAF1-215ENST00000544909 ZMYM1Q5SVZ6 1142 aa14.76□□□□□ -0.05
PAAF1-215ENST00000544909 ISCA1Q9BUE6 129 aa14.76□□□□□ -0.05
PAAF1-215ENST00000544909 PAG1Q9NWQ8 432 aa14.76□□□□□ -0.05
PAAF1-215ENST00000544909 AKAP2Q9Y2D5 859 aa14.76□□□□□ -0.05
PAAF1-215ENST00000544909 LRP6O75581 1613 aa14.76□□□□□ -0.05
PAAF1-215ENST00000544909 TOM1L2Q6ZVM7 507 aa14.76□□□□□ -0.05
PAAF1-215ENST00000544909 CABLES1Q8TDN4 633 aa14.76□□□□□ -0.05
PAAF1-215ENST00000544909 NAA16Q6N069 864 aaPredicted RBP14.75□□□□□ -0.05
PAAF1-215ENST00000544909 RBM43Q6ZSC3 357 aaKnown RBP14.75□□□□□ -0.05
PAAF1-215ENST00000544909 DHX32Q7L7V1 743 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms