RNA–Protein interactions for RNA: ENST00000544521.1

IGHMBP2-208, Transcript of immunoglobulin mu DNA binding protein 2, humanhuman

TSL 1 (best)

Gene IGHMBP2, Length 1,683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHMBP2-208ENST00000544521 LAMB2P55268 1798 aa23.3■■□□□ 1.32
IGHMBP2-208ENST00000544521 SLC15A2Q16348 729 aa23.3■■□□□ 1.32
IGHMBP2-208ENST00000544521 CCDC57Q2TAC2 916 aa23.3■■□□□ 1.32
IGHMBP2-208ENST00000544521 ERFEQ4G0M1 354 aa23.3■■□□□ 1.32
IGHMBP2-208ENST00000544521 SIL1Q9H173 461 aa23.3■■□□□ 1.32
IGHMBP2-208ENST00000544521 STK32BQ9NY57 414 aa23.3■■□□□ 1.32
IGHMBP2-208ENST00000544521 PNPLA7Q6ZV29 1317 aa23.3■■□□□ 1.32
IGHMBP2-208ENST00000544521 DDX60Q8IY21 1712 aaKnown RBP23.3■■□□□ 1.32
IGHMBP2-208ENST00000544521 TPTE2Q6XPS3 522 aa23.29■■□□□ 1.32
IGHMBP2-208ENST00000544521 GTF2E1P29083 439 aaPredicted RBP23.28■■□□□ 1.32
IGHMBP2-208ENST00000544521 IFIT5Q13325 482 aaKnown RBP23.28■■□□□ 1.32
IGHMBP2-208ENST00000544521 SLC10A5Q5PT55 438 aa23.28■■□□□ 1.32
IGHMBP2-208ENST00000544521 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
IGHMBP2-208ENST00000544521 MSH5O43196 834 aa23.28■■□□□ 1.32
IGHMBP2-208ENST00000544521 C16orf71Q8IYS4 520 aaPredicted RBP23.28■■□□□ 1.32
IGHMBP2-208ENST00000544521 GREM2Q9H772 168 aa23.28■■□□□ 1.32
IGHMBP2-208ENST00000544521 ABCC12Q96J65 1359 aa23.27■■□□□ 1.32
IGHMBP2-208ENST00000544521 TM4SF1P30408 202 aa23.27■■□□□ 1.32
IGHMBP2-208ENST00000544521 BCL11AQ9H165 835 aa23.27■■□□□ 1.32
IGHMBP2-208ENST00000544521 IL1RAPL2Q9NP60 686 aa23.27■■□□□ 1.32
IGHMBP2-208ENST00000544521 SASH1O94885 1247 aa23.26■■□□□ 1.31
IGHMBP2-208ENST00000544521 ITGA6P23229 1130 aa23.26■■□□□ 1.31
IGHMBP2-208ENST00000544521 ANKRD18BA2A2Z9 1011 aa23.25■■□□□ 1.31
IGHMBP2-208ENST00000544521 CCDC152Q4G0S7 254 aa23.25■■□□□ 1.31
IGHMBP2-208ENST00000544521 PLEKHM2Q8IWE5 1019 aa23.25■■□□□ 1.31
IGHMBP2-208ENST00000544521 OTUD7AQ8TE49 926 aaPredicted RBP23.25■■□□□ 1.31
IGHMBP2-208ENST00000544521 ZNF594Q96JF6 807 aaPredicted RBP23.25■■□□□ 1.31
IGHMBP2-208ENST00000544521 NLGN1Q8N2Q7 840 aa23.25■■□□□ 1.31
IGHMBP2-208ENST00000544521 RTL9Q8NET4 1388 aa23.24■■□□□ 1.31
IGHMBP2-208ENST00000544521 EYA2O00167 538 aa23.24■■□□□ 1.31
IGHMBP2-208ENST00000544521 CIAO1O76071 339 aa23.24■■□□□ 1.31
IGHMBP2-208ENST00000544521 TAF7LQ5H9L4 462 aa23.24■■□□□ 1.31
IGHMBP2-208ENST00000544521 FBXO3Q9UK99 471 aa23.24■■□□□ 1.31
IGHMBP2-208ENST00000544521 QSER1Q2KHR3 1735 aa23.24■■□□□ 1.31
IGHMBP2-208ENST00000544521 ATG9AQ7Z3C6 839 aa23.23■■□□□ 1.31
IGHMBP2-208ENST00000544521 CNBD1Q8NA66 436 aa23.23■■□□□ 1.31
IGHMBP2-208ENST00000544521 SALL3Q9BXA9 1300 aa23.23■■□□□ 1.31
IGHMBP2-208ENST00000544521 NPHP1O15259 732 aa23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 IL15P40933 162 aaPredicted RBP23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 DDR1Q08345 913 aa23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 SF3B3Q15393 1217 aaKnown RBP23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 CLASRPQ8N2M8 674 aaKnown RBP23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 POLRMTO00411 1230 aaKnown RBP23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 SERPINB2P05120 415 aa23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 LRRC24Q50LG9 513 aa23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 C3orf67Q6ZVT6 689 aa23.22■■□□□ 1.31
IGHMBP2-208ENST00000544521 PRR5LQ6MZQ0 368 aa23.21■■□□□ 1.31
IGHMBP2-208ENST00000544521 PUS3Q9BZE2 481 aaKnown RBP23.21■■□□□ 1.31
IGHMBP2-208ENST00000544521 CCDC24Q8N4L8 307 aa23.2■■□□□ 1.3
IGHMBP2-208ENST00000544521 NLRP3Q96P20 1036 aa23.2■■□□□ 1.3
IGHMBP2-208ENST00000544521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
IGHMBP2-208ENST00000544521 MX1P20591 662 aa23.19■■□□□ 1.3
IGHMBP2-208ENST00000544521 PDE1AP54750 535 aa23.19■■□□□ 1.3
IGHMBP2-208ENST00000544521 TFCP2Q12800 502 aa23.19■■□□□ 1.3
IGHMBP2-208ENST00000544521 OSBPL3Q9H4L5 887 aa23.19■■□□□ 1.3
IGHMBP2-208ENST00000544521 RIC1Q4ADV7 1423 aa23.19■■□□□ 1.3
IGHMBP2-208ENST00000544521 SEC31BQ9NQW1 1179 aa23.19■■□□□ 1.3
IGHMBP2-208ENST00000544521 LRP5O75197 1615 aa23.19■■□□□ 1.3
IGHMBP2-208ENST00000544521 ST5P78524 1137 aa23.18■■□□□ 1.3
IGHMBP2-208ENST00000544521 LDHAL6AQ6ZMR3 332 aa23.18■■□□□ 1.3
IGHMBP2-208ENST00000544521 AACSQ86V21 672 aa23.18■■□□□ 1.3
IGHMBP2-208ENST00000544521 STAP2Q9UGK3 403 aa23.18■■□□□ 1.3
IGHMBP2-208ENST00000544521 BMP2KLQ5H9B9 411 aa23.17■■□□□ 1.3
IGHMBP2-208ENST00000544521 EAF2Q96CJ1 260 aaPredicted RBP23.17■■□□□ 1.3
IGHMBP2-208ENST00000544521 IFIT2P09913 472 aaKnown RBP23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 UPF1Q92900 1129 aaKnown RBP eCLIP23.16■■□□□ 1.35e-6■■□□□ 13.5
IGHMBP2-208ENST00000544521 RIPOR2Q9Y4F9 1068 aa23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 CASZ1Q86V15 1759 aa23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 TNNI3KQ59H18 835 aa23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 TTC22Q5TAA0 569 aa23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 CDC5LQ99459 802 aaKnown RBP23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 GPR108Q9NPR9 543 aa23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 CNNM1Q9NRU3 951 aa23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 FPGT-TNNI3KV9GXZ4 949 aa23.16■■□□□ 1.3
IGHMBP2-208ENST00000544521 TNRC6CQ9HCJ0 1690 aaKnown RBP23.15■■□□□ 1.3
IGHMBP2-208ENST00000544521 AOX1Q06278 1338 aa23.15■■□□□ 1.3
IGHMBP2-208ENST00000544521 MMP10P09238 476 aa23.15■■□□□ 1.3
IGHMBP2-208ENST00000544521 IGHMBP2P38935 993 aaKnown RBP23.15■■□□□ 1.3
IGHMBP2-208ENST00000544521 CEP126Q9P2H0 1117 aa23.15■■□□□ 1.3
IGHMBP2-208ENST00000544521 TSHZ3Q63HK5 1081 aa23.14■■□□□ 1.29
IGHMBP2-208ENST00000544521 MPHOSPH8Q99549 860 aa23.14■■□□□ 1.29
IGHMBP2-208ENST00000544521 NRXN2Q9P2S2 1712 aa23.14■■□□□ 1.29
IGHMBP2-208ENST00000544521 GSPT1P15170 499 aaKnown RBP23.13■■□□□ 1.29
IGHMBP2-208ENST00000544521 CCDC8Q9H0W5 538 aaPredicted RBP23.13■■□□□ 1.29
IGHMBP2-208ENST00000544521 PARP3Q9Y6F1 533 aa23.13■■□□□ 1.29
IGHMBP2-208ENST00000544521 TTC41PQ6P2S7 1318 aa23.12■■□□□ 1.29
IGHMBP2-208ENST00000544521 C8orf34Q49A92 452 aa23.12■■□□□ 1.29
IGHMBP2-208ENST00000544521 METTL24Q5JXM2 366 aa23.12■■□□□ 1.29
IGHMBP2-208ENST00000544521 ANKRD18AQ8IVF6 992 aa23.12■■□□□ 1.29
IGHMBP2-208ENST00000544521 GPATCH3Q96I76 525 aa23.12■■□□□ 1.29
IGHMBP2-208ENST00000544521 ZNF609O15014 1411 aa23.12■■□□□ 1.29
IGHMBP2-208ENST00000544521 BACH2Q9BYV9 841 aa23.11■■□□□ 1.29
IGHMBP2-208ENST00000544521 TLR7Q9NYK1 1049 aaKnown RBP23.11■■□□□ 1.29
IGHMBP2-208ENST00000544521 MROH5Q6ZUA9 1318 aa23.11■■□□□ 1.29
IGHMBP2-208ENST00000544521 DDX46Q7L014 1031 aaKnown RBP23.1■■□□□ 1.29
IGHMBP2-208ENST00000544521 PI4K2BQ8TCG2 481 aa23.1■■□□□ 1.29
IGHMBP2-208ENST00000544521 ECHDC1Q9NTX5 307 aa23.1■■□□□ 1.29
IGHMBP2-208ENST00000544521 AKAP2Q9Y2D5 859 aa23.1■■□□□ 1.29
IGHMBP2-208ENST00000544521 COL4A1P02462 1669 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms