RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 CASQ1P31415 396 aa21.36■■□□□ 1.01
CCT4-204ENST00000544079 ZSCAN26Q16670 478 aa21.36■■□□□ 1.01
CCT4-204ENST00000544079 AK7Q96M32 723 aa21.36■■□□□ 1.01
CCT4-204ENST00000544079 MYO5BQ9ULV0 1848 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 MYO1CO00159 1063 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 NPHP1O15259 732 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 MAP4K4O95819 1239 aaPredicted RBP21.35■■□□□ 1.01
CCT4-204ENST00000544079 ETF1P62495 437 aaKnown RBP21.35■■□□□ 1.01
CCT4-204ENST00000544079 PTH1RQ03431 593 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 HSP90AB4PQ58FF6 505 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 SULT6B1Q6IMI4 303 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 EXOC4Q96A65 974 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 UBTFL1P0CB47 393 aaPredicted RBP21.35■■□□□ 1.01
CCT4-204ENST00000544079 CEP57L1Q8IYX8 460 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 FBXO18Q8NFZ0 1043 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 SMARCE1Q969G3 411 aa21.35■■□□□ 1.01
CCT4-204ENST00000544079 C3P01024 1663 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 TADA3O75528 432 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 RESTQ13127 1097 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 IDI1Q13907 227 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 CCDC30Q5VVM6 783 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 LARP1Q6PKG0 1096 aaKnown RBP21.34■■□□□ 1.01
CCT4-204ENST00000544079 SPATA31D1Q6ZQQ2 1576 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 NBPF11Q86T75 865 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 USP44Q9H0E7 712 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 SNRKQ9NRH2 765 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
CCT4-204ENST00000544079 SURF6O75683 361 aaKnown RBP21.33■■□□□ 1.01
CCT4-204ENST00000544079 MAPK8IP2Q13387 824 aaPredicted RBP21.33■■□□□ 1.01
CCT4-204ENST00000544079 EIF4A2Q14240 407 aaKnown RBP21.33■■□□□ 1.01
CCT4-204ENST00000544079 RGS22Q8NE09 1264 aa21.33■■□□□ 1.01
CCT4-204ENST00000544079 ATG3Q9NT62 314 aa21.33■■□□□ 1.01
CCT4-204ENST00000544079 CREB3L3Q68CJ9 461 aa21.32■■□□□ 1
CCT4-204ENST00000544079 TEX2Q8IWB9 1127 aa21.32■■□□□ 1
CCT4-204ENST00000544079 LRRN4CLQ8ND94 238 aa21.32■■□□□ 1
CCT4-204ENST00000544079 BPIFA3Q9BQP9 254 aa21.32■■□□□ 1
CCT4-204ENST00000544079 DNAI1Q9UI46 699 aa21.32■■□□□ 1
CCT4-204ENST00000544079 POLR3GO15318 223 aaPredicted RBP21.32■■□□□ 1
CCT4-204ENST00000544079 DHX16O60231 1041 aaKnown RBP21.32■■□□□ 1
CCT4-204ENST00000544079 OAS2P29728 719 aaKnown RBP21.32■■□□□ 1
CCT4-204ENST00000544079 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
CCT4-204ENST00000544079 CCDC191Q8NCU4 936 aa21.32■■□□□ 1
CCT4-204ENST00000544079 MNS1Q8NEH6 495 aa21.32■■□□□ 1
CCT4-204ENST00000544079 BRMS1Q9HCU9 246 aa21.32■■□□□ 1
CCT4-204ENST00000544079 CHRM1P11229 460 aaPredicted RBP21.31■■□□□ 1
CCT4-204ENST00000544079 RRS1Q15050 365 aaKnown RBP21.31■■□□□ 1
CCT4-204ENST00000544079 ATL3Q6DD88 541 aa21.31■■□□□ 1
CCT4-204ENST00000544079 GOLGA6L1Q8N7Z2 621 aa21.31■■□□□ 1
CCT4-204ENST00000544079 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
CCT4-204ENST00000544079 AKAP12Q02952 1782 aa21.31■■□□□ 1
CCT4-204ENST00000544079 HIP1O00291 1037 aa21.31■■□□□ 1
CCT4-204ENST00000544079 TBC1D8O95759 1140 aa21.31■■□□□ 1
CCT4-204ENST00000544079 SFPQP23246 707 aaKnown RBP eCLIP21.31■■□□□ 1
CCT4-204ENST00000544079 ST5P78524 1137 aa21.31■■□□□ 1
CCT4-204ENST00000544079 SRLQ86TD4 932 aa21.31■■□□□ 1
CCT4-204ENST00000544079 MAP4K1Q92918 833 aa21.31■■□□□ 1
CCT4-204ENST00000544079 STAG3Q9UJ98 1225 aa21.31■■□□□ 1
CCT4-204ENST00000544079 MYH15Q9Y2K3 1946 aa21.31■■□□□ 1
CCT4-204ENST00000544079 SMC1AQ14683 1233 aaKnown RBP21.3■■□□□ 1
CCT4-204ENST00000544079 PPP1R42Q7Z4L9 355 aa21.3■■□□□ 1
CCT4-204ENST00000544079 RCOR1Q9UKL0 485 aa21.3■■□□□ 1
CCT4-204ENST00000544079 RBM8AQ9Y5S9 174 aaKnown RBP21.3■■□□□ 1
CCT4-204ENST00000544079 CPS1P31327 1500 aa21.3■■□□□ 1
CCT4-204ENST00000544079 GPR161Q8N6U8 529 aaKnown RBP21.3■■□□□ 1
CCT4-204ENST00000544079 CC2D1AQ6P1N0 951 aaPredicted RBP21.29■■□□□ 1
CCT4-204ENST00000544079 BLOC1S2Q6QNY1 142 aa21.29■■□□□ 1
CCT4-204ENST00000544079 LRRC37A3O60309 1634 aa21.29■■□□□ 1
CCT4-204ENST00000544079 RPS6KB1P23443 525 aa21.29■■□□□ 1
CCT4-204ENST00000544079 NOM1Q5C9Z4 860 aaKnown RBP21.29■■□□□ 1
CCT4-204ENST00000544079 ARMCX5Q6P1M9 558 aa21.29■■□□□ 1
CCT4-204ENST00000544079 CCDC73Q6ZRK6 1079 aa21.29■■□□□ 1
CCT4-204ENST00000544079 IVLP07476 585 aa21.28■■□□□ 1
CCT4-204ENST00000544079 PSME1Q06323 249 aa21.28■■□□□ 1
CCT4-204ENST00000544079 TSGA10IPQ3SY00 556 aa21.28■■□□□ 1
CCT4-204ENST00000544079 ICE2Q659A1 982 aa21.28■■□□□ 1
CCT4-204ENST00000544079 FCHSD1Q86WN1 690 aa21.28■■□□□ 1
CCT4-204ENST00000544079 KINO60870 393 aaKnown RBP21.27■■□□□ 1
CCT4-204ENST00000544079 JAKMIP3Q5VZ66 844 aa21.27■■□□□ 1
CCT4-204ENST00000544079 REXO1L1PQ8IX06 675 aa21.27■■□□□ 1
CCT4-204ENST00000544079 CCAR1Q8IX12 1150 aaKnown RBP21.27■■□□□ 1
CCT4-204ENST00000544079 AOPEPQ8N6M6 819 aa21.27■■□□□ 1
CCT4-204ENST00000544079 EVI5LQ96CN4 794 aa21.27■■□□□ 1
CCT4-204ENST00000544079 ZRANB1Q9UGI0 708 aa21.27■■□□□ 1
CCT4-204ENST00000544079 SLC27A2O14975 620 aa21.27■■□□□ 1
CCT4-204ENST00000544079 FAM160A1Q05DH4 1040 aa21.27■■□□□ 1
CCT4-204ENST00000544079 ENGASEQ8NFI3 743 aa21.27■■□□□ 1
CCT4-204ENST00000544079 PLEKHG2Q9H7P9 1386 aa21.27■□□□□ 0.99
CCT4-204ENST00000544079 HOMER1Q86YM7 354 aa21.26■□□□□ 0.99
CCT4-204ENST00000544079 C10orf67Q8IYJ2 551 aa21.26■□□□□ 0.99
CCT4-204ENST00000544079 MSL3Q8N5Y2 521 aaKnown RBP21.26■□□□□ 0.99
CCT4-204ENST00000544079 GPATCH3Q96I76 525 aa21.26■□□□□ 0.99
CCT4-204ENST00000544079 RRP15Q9Y3B9 282 aaKnown RBP21.26■□□□□ 0.99
CCT4-204ENST00000544079 RPS6KA5O75582 802 aa21.26■□□□□ 0.99
CCT4-204ENST00000544079 SASH3O75995 380 aa21.26■□□□□ 0.99
CCT4-204ENST00000544079 ACTN2P35609 894 aa21.26■□□□□ 0.99
CCT4-204ENST00000544079 TOB2Q14106 344 aaPredicted RBP21.26■□□□□ 0.99
CCT4-204ENST00000544079 TRIM65Q6PJ69 517 aa21.26■□□□□ 0.99
CCT4-204ENST00000544079 HMG20BQ9P0W2 317 aa21.26■□□□□ 0.99
CCT4-204ENST00000544079 MPHOSPH8Q99549 860 aa21.25■□□□□ 0.99
CCT4-204ENST00000544079 ARFGAP3Q9NP61 516 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms