RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 REC8O95072 547 aa24.2■■□□□ 1.46
COPS7A-218ENST00000543939 LRRC24Q50LG9 513 aa24.2■■□□□ 1.46
COPS7A-218ENST00000543939 KRT27Q7Z3Y8 459 aa24.2■■□□□ 1.46
COPS7A-218ENST00000543939 UTP14AQ9BVJ6 771 aaKnown RBP24.2■■□□□ 1.46
COPS7A-218ENST00000543939 IFIT5Q13325 482 aaKnown RBP24.19■■□□□ 1.46
COPS7A-218ENST00000543939 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
COPS7A-218ENST00000543939 DBNLQ9UJU6 430 aaKnown RBP24.19■■□□□ 1.46
COPS7A-218ENST00000543939 NIP7Q9Y221 180 aaKnown RBP eCLIP24.19■■□□□ 1.46
COPS7A-218ENST00000543939 DDX60Q8IY21 1712 aaKnown RBP24.19■■□□□ 1.46
COPS7A-218ENST00000543939 SH3TC1Q8TE82 1336 aa24.19■■□□□ 1.46
COPS7A-218ENST00000543939 C4BP0C0L5 1744 aa24.19■■□□□ 1.46
COPS7A-218ENST00000543939 SLC4A3P48751 1232 aa24.18■■□□□ 1.46
COPS7A-218ENST00000543939 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
COPS7A-218ENST00000543939 KIF2CQ99661 725 aa24.18■■□□□ 1.46
COPS7A-218ENST00000543939 PUS3Q9BZE2 481 aaKnown RBP24.18■■□□□ 1.46
COPS7A-218ENST00000543939 BECN1Q14457 450 aa24.18■■□□□ 1.46
COPS7A-218ENST00000543939 ERICH6Q7L0X2 663 aa24.18■■□□□ 1.46
COPS7A-218ENST00000543939 CCDC85AQ96PX6 553 aaPredicted RBP24.18■■□□□ 1.46
COPS7A-218ENST00000543939 DAXXQ9UER7 740 aaPredicted RBP24.18■■□□□ 1.46
COPS7A-218ENST00000543939 NTSR2O95665 410 aa24.17■■□□□ 1.46
COPS7A-218ENST00000543939 GREM2Q9H772 168 aa24.17■■□□□ 1.46
COPS7A-218ENST00000543939 RBM6P78332 1123 aaKnown RBP24.16■■□□□ 1.46
COPS7A-218ENST00000543939 GNPATO15228 680 aa24.15■■□□□ 1.46
COPS7A-218ENST00000543939 ITGA6P23229 1130 aa24.15■■□□□ 1.46
COPS7A-218ENST00000543939 EVI5LQ96CN4 794 aa24.15■■□□□ 1.46
COPS7A-218ENST00000543939 ZNF609O15014 1411 aa24.15■■□□□ 1.46
COPS7A-218ENST00000543939 ATP5JP18859 108 aa24.15■■□□□ 1.46
COPS7A-218ENST00000543939 TAF7LQ5H9L4 462 aa24.15■■□□□ 1.46
COPS7A-218ENST00000543939 DBNDD2Q9BQY9 259 aa24.15■■□□□ 1.46
COPS7A-218ENST00000543939 NARFQ9UHQ1 456 aa24.15■■□□□ 1.46
COPS7A-218ENST00000543939 ANKRD18BA2A2Z9 1011 aa24.14■■□□□ 1.45
COPS7A-218ENST00000543939 SMIM5Q71RC9 77 aa24.14■■□□□ 1.45
COPS7A-218ENST00000543939 BCL2L12Q9HB09 334 aa24.14■■□□□ 1.45
COPS7A-218ENST00000543939 RTCBQ9Y3I0 505 aaKnown RBP24.14■■□□□ 1.45
COPS7A-218ENST00000543939 FAM177BA6PVY3 158 aa24.13■■□□□ 1.45
COPS7A-218ENST00000543939 TBC1D2Q9BYX2 928 aa24.13■■□□□ 1.45
COPS7A-218ENST00000543939 BOLA2Q9H3K6 86 aa24.13■■□□□ 1.45
COPS7A-218ENST00000543939 CEP126Q9P2H0 1117 aa24.13■■□□□ 1.45
COPS7A-218ENST00000543939 LRP5O75197 1615 aa24.13■■□□□ 1.45
COPS7A-218ENST00000543939 C4AP0C0L4 1744 aa24.13■■□□□ 1.45
COPS7A-218ENST00000543939 HCLS1P14317 486 aaPredicted RBP24.13■■□□□ 1.45
COPS7A-218ENST00000543939 LRRC4BQ9NT99 713 aa24.12■■□□□ 1.45
COPS7A-218ENST00000543939 RIPOR2Q9Y4F9 1068 aa24.12■■□□□ 1.45
COPS7A-218ENST00000543939 HSP90B1P14625 803 aaKnown RBP24.11■■□□□ 1.45
COPS7A-218ENST00000543939 USPL1Q5W0Q7 1092 aa24.11■■□□□ 1.45
COPS7A-218ENST00000543939 COL24A1Q17RW2 1714 aa24.11■■□□□ 1.45
COPS7A-218ENST00000543939 RIC1Q4ADV7 1423 aa24.11■■□□□ 1.45
COPS7A-218ENST00000543939 TIMM10P62072 90 aa24.1■■□□□ 1.45
COPS7A-218ENST00000543939 AMIGO3Q86WK7 504 aa24.1■■□□□ 1.45
COPS7A-218ENST00000543939 IL25Q9H293 177 aa24.1■■□□□ 1.45
COPS7A-218ENST00000543939 SGSM2O43147 1006 aa24.1■■□□□ 1.45
COPS7A-218ENST00000543939 LDHAL6AQ6ZMR3 332 aa24.1■■□□□ 1.45
COPS7A-218ENST00000543939 NEUROD6Q96NK8 337 aa24.1■■□□□ 1.45
COPS7A-218ENST00000543939 SRP68Q9UHB9 627 aaKnown RBP24.1■■□□□ 1.45
COPS7A-218ENST00000543939 A0A1B0GUL7 405 aa24.09■■□□□ 1.45
COPS7A-218ENST00000543939 EPB41L2O43491 1005 aaKnown RBP24.09■■□□□ 1.45
COPS7A-218ENST00000543939 TRIM37O94972 964 aa24.09■■□□□ 1.45
COPS7A-218ENST00000543939 TBC1D9BQ66K14 1250 aa24.09■■□□□ 1.45
COPS7A-218ENST00000543939 ARHGEF1Q92888 912 aaKnown RBP24.09■■□□□ 1.45
COPS7A-218ENST00000543939 SNX21Q969T3 373 aa24.09■■□□□ 1.45
COPS7A-218ENST00000543939 AKAP2Q9Y2D5 859 aa24.09■■□□□ 1.45
COPS7A-218ENST00000543939 CASZ1Q86V15 1759 aa24.09■■□□□ 1.45
COPS7A-218ENST00000543939 UBR3Q6ZT12 1888 aa24.09■■□□□ 1.45
COPS7A-218ENST00000543939 RTL9Q8NET4 1388 aa24.08■■□□□ 1.45
COPS7A-218ENST00000543939 ZPR1O75312 459 aa24.08■■□□□ 1.45
COPS7A-218ENST00000543939 SLC27A3Q5K4L6 730 aa24.07■■□□□ 1.44
COPS7A-218ENST00000543939 HAUS7Q99871 368 aa24.07■■□□□ 1.44
COPS7A-218ENST00000543939 ANO2Q9NQ90 1003 aa24.07■■□□□ 1.44
COPS7A-218ENST00000543939 DIAPH3Q9NSV4 1193 aa24.07■■□□□ 1.44
COPS7A-218ENST00000543939 HIP1O00291 1037 aa24.06■■□□□ 1.44
COPS7A-218ENST00000543939 CCDC152Q4G0S7 254 aa24.06■■□□□ 1.44
COPS7A-218ENST00000543939 CWC27Q6UX04 472 aaKnown RBP24.06■■□□□ 1.44
COPS7A-218ENST00000543939 RUFY2Q8WXA3 655 aa24.06■■□□□ 1.44
COPS7A-218ENST00000543939 CNNM1Q9NRU3 951 aa24.06■■□□□ 1.44
COPS7A-218ENST00000543939 METTL24Q5JXM2 366 aa24.05■■□□□ 1.44
COPS7A-218ENST00000543939 RABEP1Q15276 862 aa24.04■■□□□ 1.44
COPS7A-218ENST00000543939 ERFEQ4G0M1 354 aa24.04■■□□□ 1.44
COPS7A-218ENST00000543939 TRAPPC3LQ5T215 181 aa24.04■■□□□ 1.44
COPS7A-218ENST00000543939 BICDL1Q6ZP65 573 aa24.04■■□□□ 1.44
COPS7A-218ENST00000543939 VGLL2Q8N8G2 317 aa24.04■■□□□ 1.44
COPS7A-218ENST00000543939 SPEF2Q9C093 1822 aa24.04■■□□□ 1.44
COPS7A-218ENST00000543939 FSD1Q9BTV5 496 aa24.04■■□□□ 1.44
COPS7A-218ENST00000543939 RFX7Q2KHR2 1363 aa24.03■■□□□ 1.44
COPS7A-218ENST00000543939 ADRA2BP18089 450 aa24.03■■□□□ 1.44
COPS7A-218ENST00000543939 SLC10A5Q5PT55 438 aa24.03■■□□□ 1.44
COPS7A-218ENST00000543939 HSCBQ8IWL3 235 aa24.03■■□□□ 1.44
COPS7A-218ENST00000543939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.03■■□□□ 1.44
COPS7A-218ENST00000543939 EDC3Q96F86 508 aaKnown RBP24.03■■□□□ 1.44
COPS7A-218ENST00000543939 XAGE2Q96GT9 111 aa24.03■■□□□ 1.44
COPS7A-218ENST00000543939 SETDB2Q96T68 719 aa24.03■■□□□ 1.44
COPS7A-218ENST00000543939 SEC31BQ9NQW1 1179 aa24.03■■□□□ 1.44
COPS7A-218ENST00000543939 MCCP23508 829 aa24.02■■□□□ 1.44
COPS7A-218ENST00000543939 RFC4P35249 363 aa24.02■■□□□ 1.44
COPS7A-218ENST00000543939 NYXQ9GZU5 481 aa24.02■■□□□ 1.44
COPS7A-218ENST00000543939 LSG1Q9H089 658 aaKnown RBP24.02■■□□□ 1.44
COPS7A-218ENST00000543939 PHF14O94880 888 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 RXRBP28702 533 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 ADORA1P30542 326 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 ATP2B3Q16720 1220 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 DNAJC2Q99543 621 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms