RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 UTYO14607 1347 aa19.07■□□□□ 0.64
CD9-210ENST00000543916 NBPF7P0C2Y1 421 aaPredicted RBP19.07■□□□□ 0.64
CD9-210ENST00000543916 ALDH1B1P30837 517 aa19.07■□□□□ 0.64
CD9-210ENST00000543916 CTSWP56202 376 aa19.07■□□□□ 0.64
CD9-210ENST00000543916 SLC51AQ86UW1 340 aa19.07■□□□□ 0.64
CD9-210ENST00000543916 PLA2G12BQ9BX93 195 aa19.07■□□□□ 0.64
CD9-210ENST00000543916 LRRC37AA6NMS7 1700 aa19.07■□□□□ 0.64
CD9-210ENST00000543916 C21orf2O43822 256 aa19.06■□□□□ 0.64
CD9-210ENST00000543916 GRIN3BO60391 1043 aa19.06■□□□□ 0.64
CD9-210ENST00000543916 INTS3Q68E01 1043 aaKnown RBP19.06■□□□□ 0.64
CD9-210ENST00000543916 DDX46Q7L014 1031 aaKnown RBP19.06■□□□□ 0.64
CD9-210ENST00000543916 CCDC85AQ96PX6 553 aaPredicted RBP19.06■□□□□ 0.64
CD9-210ENST00000543916 USP44Q9H0E7 712 aa19.06■□□□□ 0.64
CD9-210ENST00000543916 FOXO4P98177 505 aa19.05■□□□□ 0.64
CD9-210ENST00000543916 EPHA10Q5JZY3 1008 aa19.05■□□□□ 0.64
CD9-210ENST00000543916 TTLL11Q8NHH1 800 aa19.05■□□□□ 0.64
CD9-210ENST00000543916 C7orf43Q8WVR3 580 aa19.05■□□□□ 0.64
CD9-210ENST00000543916 SUCLG2Q96I99 432 aa19.05■□□□□ 0.64
CD9-210ENST00000543916 CHD4Q14839 1912 aa19.04■□□□□ 0.64
CD9-210ENST00000543916 RLBP1P12271 317 aa19.04■□□□□ 0.64
CD9-210ENST00000543916 GRAPQ13588 217 aa19.04■□□□□ 0.64
CD9-210ENST00000543916 CCDC152Q4G0S7 254 aa19.04■□□□□ 0.64
CD9-210ENST00000543916 OLFM4Q6UX06 510 aa19.04■□□□□ 0.64
CD9-210ENST00000543916 GRAPLQ8TC17 118 aaPredicted RBP19.04■□□□□ 0.64
CD9-210ENST00000543916 KAZALD1Q96I82 304 aa19.04■□□□□ 0.64
CD9-210ENST00000543916 SEC31BQ9NQW1 1179 aa19.04■□□□□ 0.64
CD9-210ENST00000543916 SNED1Q8TER0 1413 aa19.03■□□□□ 0.64
CD9-210ENST00000543916 PPEF1O14829 653 aaPredicted RBP19.03■□□□□ 0.64
CD9-210ENST00000543916 ARHGAP27Q6ZUM4 889 aa19.03■□□□□ 0.64
CD9-210ENST00000543916 DZIP1LQ8IYY4 767 aaKnown RBP19.03■□□□□ 0.64
CD9-210ENST00000543916 TMEM57Q8N5G2 664 aa19.03■□□□□ 0.64
CD9-210ENST00000543916 CELF1Q92879 486 aaKnown RBP19.03■□□□□ 0.64
CD9-210ENST00000543916 GREM2Q9H772 168 aa19.03■□□□□ 0.64
CD9-210ENST00000543916 RTL9Q8NET4 1388 aa19.03■□□□□ 0.64
CD9-210ENST00000543916 SBF1O95248 1867 aa19.03■□□□□ 0.64
CD9-210ENST00000543916 PLIN1O60240 522 aa19.02■□□□□ 0.64
CD9-210ENST00000543916 CSF1RP07333 972 aa19.02■□□□□ 0.64
CD9-210ENST00000543916 UTRNP46939 3433 aa19.02■□□□□ 0.63
CD9-210ENST00000543916 CCDC88AQ3V6T2 1871 aa19.01■□□□□ 0.63
CD9-210ENST00000543916 FAM161AQ3B820 660 aa19.01■□□□□ 0.63
CD9-210ENST00000543916 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
CD9-210ENST00000543916 MEIS3Q99687 375 aa19.01■□□□□ 0.63
CD9-210ENST00000543916 LTBP1Q14766 1721 aa19■□□□□ 0.63
CD9-210ENST00000543916 NFKBIEO00221 500 aa19■□□□□ 0.63
CD9-210ENST00000543916 BBOX1O75936 387 aa19■□□□□ 0.63
CD9-210ENST00000543916 RASSF7Q02833 373 aa19■□□□□ 0.63
CD9-210ENST00000543916 LMBR1LQ6UX01 489 aa19■□□□□ 0.63
CD9-210ENST00000543916 PANK1Q8TE04 598 aa19■□□□□ 0.63
CD9-210ENST00000543916 BICC1Q9H694 974 aaKnown RBP19■□□□□ 0.63
CD9-210ENST00000543916 UBTFL1P0CB47 393 aaPredicted RBP18.99■□□□□ 0.63
CD9-210ENST00000543916 CCDC93Q567U6 631 aa18.99■□□□□ 0.63
CD9-210ENST00000543916 SOGA3Q5TF21 947 aa18.99■□□□□ 0.63
CD9-210ENST00000543916 ANKRD44Q8N8A2 993 aa18.99■□□□□ 0.63
CD9-210ENST00000543916 ATP6V0A2Q9Y487 856 aa18.99■□□□□ 0.63
CD9-210ENST00000543916 A0A1B0GUL6 1792 aa18.98■□□□□ 0.63
CD9-210ENST00000543916 TIAM2Q8IVF5 1701 aa18.98■□□□□ 0.63
CD9-210ENST00000543916 ITGA6P23229 1130 aa18.98■□□□□ 0.63
CD9-210ENST00000543916 RPS8P62241 208 aaKnown RBP18.98■□□□□ 0.63
CD9-210ENST00000543916 DUOX1Q9NRD9 1551 aa18.98■□□□□ 0.63
CD9-210ENST00000543916 PRELPP51888 382 aa18.97■□□□□ 0.63
CD9-210ENST00000543916 RABL6Q3YEC7 729 aaPredicted RBP18.97■□□□□ 0.63
CD9-210ENST00000543916 ITPRIPQ8IWB1 547 aa18.97■□□□□ 0.63
CD9-210ENST00000543916 SP8Q8IXZ3 490 aa18.97■□□□□ 0.63
CD9-210ENST00000543916 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
CD9-210ENST00000543916 DICER1Q9UPY3 1922 aaKnown RBP18.96■□□□□ 0.63
CD9-210ENST00000543916 TMC4Q7Z404 712 aa18.96■□□□□ 0.63
CD9-210ENST00000543916 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
CD9-210ENST00000543916 CDC5LQ99459 802 aaKnown RBP18.96■□□□□ 0.63
CD9-210ENST00000543916 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
CD9-210ENST00000543916 LTBP3Q9NS15 1303 aa18.96■□□□□ 0.63
CD9-210ENST00000543916 GNAI3P08754 354 aa18.95■□□□□ 0.62
CD9-210ENST00000543916 MS4A1P11836 297 aa18.95■□□□□ 0.62
CD9-210ENST00000543916 C20orf194Q5TEA3 1177 aa18.95■□□□□ 0.62
CD9-210ENST00000543916 CC2D2BQ6DHV5 1058 aa18.95■□□□□ 0.62
CD9-210ENST00000543916 RTKN2Q8IZC4 609 aa18.95■□□□□ 0.62
CD9-210ENST00000543916 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.95■□□□□ 0.62
CD9-210ENST00000543916 ANKRD18BA2A2Z9 1011 aa18.94■□□□□ 0.62
CD9-210ENST00000543916 FKBP4Q02790 459 aaKnown RBP eCLIP18.94■□□□□ 0.62
CD9-210ENST00000543916 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
CD9-210ENST00000543916 TAOK3Q9H2K8 898 aa18.94■□□□□ 0.62
CD9-210ENST00000543916 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
CD9-210ENST00000543916 ZNF594Q96JF6 807 aaPredicted RBP18.93■□□□□ 0.62
CD9-210ENST00000543916 ZBTB7BO15156 539 aaPredicted RBP18.92■□□□□ 0.62
CD9-210ENST00000543916 IGHMBP2P38935 993 aaKnown RBP18.92■□□□□ 0.62
CD9-210ENST00000543916 RRP1P56182 461 aaKnown RBP18.92■□□□□ 0.62
CD9-210ENST00000543916 GPSM2P81274 684 aa18.92■□□□□ 0.62
CD9-210ENST00000543916 MVPQ14764 893 aaKnown RBP18.92■□□□□ 0.62
CD9-210ENST00000543916 PSMD1Q99460 953 aa18.92■□□□□ 0.62
CD9-210ENST00000543916 TMX4Q9H1E5 349 aaPredicted RBP18.92■□□□□ 0.62
CD9-210ENST00000543916 BSDC1Q9NW68 430 aaPredicted RBP18.92■□□□□ 0.62
CD9-210ENST00000543916 COG6Q9Y2V7 657 aa18.92■□□□□ 0.62
CD9-210ENST00000543916 COL4A5P29400 1685 aa18.92■□□□□ 0.62
CD9-210ENST00000543916 LMNB1P20700 586 aa18.91■□□□□ 0.62
CD9-210ENST00000543916 PDE3AQ14432 1141 aa18.91■□□□□ 0.62
CD9-210ENST00000543916 GRIPAP1Q4V328 841 aa18.91■□□□□ 0.62
CD9-210ENST00000543916 C9orf131Q5VYM1 1079 aa18.91■□□□□ 0.62
CD9-210ENST00000543916 DPP8Q6V1X1 898 aaPredicted RBP18.91■□□□□ 0.62
CD9-210ENST00000543916 MPNDQ8N594 471 aa18.91■□□□□ 0.62
CD9-210ENST00000543916 ZNF277Q9NRM2 450 aaPredicted RBP18.91■□□□□ 0.62
CD9-210ENST00000543916 RNF181Q9P0P0 153 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms