RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CENPBP07199 599 aaPredicted RBP7.92□□□□□ -1.14
LTBR-212ENST00000543542 NBPF7P0C2Y1 421 aaPredicted RBP7.92□□□□□ -1.14
LTBR-212ENST00000543542 RRP1P56182 461 aaKnown RBP7.92□□□□□ -1.14
LTBR-212ENST00000543542 CTSWP56202 376 aa7.92□□□□□ -1.14
LTBR-212ENST00000543542 C3orf67Q6ZVT6 689 aa7.92□□□□□ -1.14
LTBR-212ENST00000543542 SUCLG2Q96I99 432 aa7.92□□□□□ -1.14
LTBR-212ENST00000543542 CHMP4BQ9H444 224 aaKnown RBP7.92□□□□□ -1.14
LTBR-212ENST00000543542 COG6Q9Y2V7 657 aa7.92□□□□□ -1.14
LTBR-212ENST00000543542 ANKRD18BA2A2Z9 1011 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 KLRG2A4D1S0 409 aaPredicted RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 PPEF1O14829 653 aaPredicted RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 C21orf2O43822 256 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 RLBP1P12271 317 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 KCNA3P22001 575 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 CASP7P55210 303 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 IFIT5Q13325 482 aaKnown RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 GRAPQ13588 217 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 SF3B3Q15393 1217 aaKnown RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 CCDC57Q2TAC2 916 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 CRY2Q49AN0 593 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 PRPF40BQ6NWY9 871 aaKnown RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 LMBR1LQ6UX01 489 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 ARHGAP27Q6ZUM4 889 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 ANKRD18AQ8IVF6 992 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 TTLL11Q8NHH1 800 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 GRAPLQ8TC17 118 aaPredicted RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 CRAMP1Q96RY5 1269 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 CDC5LQ99459 802 aaKnown RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 MEIS3Q99687 375 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 USP44Q9H0E7 712 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 SUPT16HQ9Y5B9 1047 aaKnown RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 SPEF2Q9C093 1822 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 TAF1P21675 1872 aa7.91□□□□□ -1.14
LTBR-212ENST00000543542 BRCA1P38398 1863 aaKnown RBP7.91□□□□□ -1.14
LTBR-212ENST00000543542 SLX4Q8IY92 1834 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 UTYO14607 1347 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 GRIN3BO60391 1043 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 GNAI2P04899 355 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 ITGA6P23229 1130 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 HOXA10P31260 410 aaPredicted RBP7.9□□□□□ -1.14
LTBR-212ENST00000543542 IGHMBP2P38935 993 aaKnown RBP7.9□□□□□ -1.14
LTBR-212ENST00000543542 PDE3AQ14432 1141 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 MVPQ14764 893 aaKnown RBP7.9□□□□□ -1.14
LTBR-212ENST00000543542 FAM161AQ3B820 660 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 C20orf194Q5TEA3 1177 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 SOGA3Q5TF21 947 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 MPHOSPH8Q99549 860 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 PLA2G12BQ9BX93 195 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 BICC1Q9H694 974 aaKnown RBP7.9□□□□□ -1.14
LTBR-212ENST00000543542 GREM2Q9H772 168 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 SEC31BQ9NQW1 1179 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 DDX19BQ9UMR2 479 aa7.9□□□□□ -1.14
LTBR-212ENST00000543542 LRRFIP2Q9Y608 721 aaKnown RBP7.9□□□□□ -1.14
LTBR-212ENST00000543542 SRCAPQ6ZRS2 3230 aa7.9□□□□□ -1.15
LTBR-212ENST00000543542 ARFGEF1Q9Y6D6 1849 aa7.89□□□□□ -1.15
LTBR-212ENST00000543542 BBOX1O75936 387 aa7.89□□□□□ -1.15
LTBR-212ENST00000543542 YBX3P16989 372 aaKnown RBP eCLIP7.89□□□□□ -1.15
LTBR-212ENST00000543542 RPS8P62241 208 aaKnown RBP7.89□□□□□ -1.15
LTBR-212ENST00000543542 FOXO4P98177 505 aa7.89□□□□□ -1.15
LTBR-212ENST00000543542 CCDC93Q567U6 631 aa7.89□□□□□ -1.15
LTBR-212ENST00000543542 EPHA10Q5JZY3 1008 aa7.89□□□□□ -1.15
LTBR-212ENST00000543542 TMC4Q7Z404 712 aa7.89□□□□□ -1.15
LTBR-212ENST00000543542 CELF1Q92879 486 aaKnown RBP7.89□□□□□ -1.15
LTBR-212ENST00000543542 ZBTB7BO15156 539 aaPredicted RBP7.88□□□□□ -1.15
LTBR-212ENST00000543542 CSF1RP07333 972 aa7.88□□□□□ -1.15
LTBR-212ENST00000543542 RTKN2Q8IZC4 609 aa7.88□□□□□ -1.15
LTBR-212ENST00000543542 C1orf115Q9H7X2 142 aa7.88□□□□□ -1.15
LTBR-212ENST00000543542 CNNM1Q9NRU3 951 aa7.88□□□□□ -1.15
LTBR-212ENST00000543542 ANKIB1Q9P2G1 1089 aa7.88□□□□□ -1.15
LTBR-212ENST00000543542 RTL9Q8NET4 1388 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 C6orf229H3BNL8 230 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 SRGAP3O43295 1099 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 KCNJ4P48050 445 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 CC2D2BQ6DHV5 1058 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 OLFM4Q6UX06 510 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 DPP8Q6V1X1 898 aaPredicted RBP7.87□□□□□ -1.15
LTBR-212ENST00000543542 LDHAL6AQ6ZMR3 332 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 SP8Q8IXZ3 490 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 MPNDQ8N594 471 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 ANKRD44Q8N8A2 993 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 KAZALD1Q96I82 304 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 ZNF594Q96JF6 807 aaPredicted RBP7.87□□□□□ -1.15
LTBR-212ENST00000543542 CRBNQ96SW2 442 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 NSFL1CQ9UNZ2 370 aaKnown RBP7.87□□□□□ -1.15
LTBR-212ENST00000543542 ATP6V0A2Q9Y487 856 aa7.87□□□□□ -1.15
LTBR-212ENST00000543542 G3V3G9 751 aa7.86□□□□□ -1.15
LTBR-212ENST00000543542 IRX6P78412 446 aaPredicted RBP7.86□□□□□ -1.15
LTBR-212ENST00000543542 RASSF7Q02833 373 aa7.86□□□□□ -1.15
LTBR-212ENST00000543542 OS9Q13438 667 aaPredicted RBP7.86□□□□□ -1.15
LTBR-212ENST00000543542 RABL6Q3YEC7 729 aaPredicted RBP7.86□□□□□ -1.15
LTBR-212ENST00000543542 GRIPAP1Q4V328 841 aa7.86□□□□□ -1.15
LTBR-212ENST00000543542 DCAF8Q5TAQ9 597 aa7.86□□□□□ -1.15
LTBR-212ENST00000543542 SUPT20HQ8NEM7 779 aa7.86□□□□□ -1.15
LTBR-212ENST00000543542 SIL1Q9H173 461 aa7.86□□□□□ -1.15
LTBR-212ENST00000543542 TAOK3Q9H2K8 898 aa7.86□□□□□ -1.15
LTBR-212ENST00000543542 BSDC1Q9NW68 430 aaPredicted RBP7.86□□□□□ -1.15
LTBR-212ENST00000543542 CCDC88AQ3V6T2 1871 aa7.85□□□□□ -1.15
LTBR-212ENST00000543542 NEFLP07196 543 aa7.85□□□□□ -1.15
LTBR-212ENST00000543542 FKBP4Q02790 459 aaKnown RBP eCLIP7.85□□□□□ -1.15
LTBR-212ENST00000543542 G3BP1Q13283 466 aaKnown RBP eCLIP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms